FFCP PHASE1:Hg19::chr1:236686676..236686688,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3964 | |EntrezGene=3964 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6569 | |HGNC=6569 | ||
|TSSclassifier=strong | |||
|UniProt=O00214 | |UniProt=O00214 | ||
|association_with_transcript=-50bp_to_ENST00000341872,ENST00000450372,NM_006499,NM_201543,uc001hxy.1,uc001hxz.1,uc009xgg.1_5end | |association_with_transcript=-50bp_to_ENST00000341872,ENST00000450372,NM_006499,NM_201543,uc001hxy.1,uc001hxz.1,uc009xgg.1_5end | ||
|cluster_id=chr1:236686676..236686688,+ | |||
|description=CAGE_peak_9_at_LGALS8_5end | |description=CAGE_peak_9_at_LGALS8_5end | ||
|id=chr1:236686676..236686688,+ | |id=chr1:236686676..236686688,+ | ||
|ontology_enrichment_celltype=CL:0000223!4.36e-17!59;CL:0000066!3.78e-12!254;CL:0002076!1.34e-09!43;CL:0000181!6.22e-07!12;CL:0000417!6.22e-07!12;CL:0000668!6.22e-07!12;CL:0000414!6.22e-07!12;CL:0000412!6.22e-07!12;CL:0000182!6.22e-07!12 | |ontology_enrichment_celltype=CL:0000223!4.36e-17!59;CL:0000066!3.78e-12!254;CL:0002076!1.34e-09!43;CL:0000181!6.22e-07!12;CL:0000417!6.22e-07!12;CL:0000668!6.22e-07!12;CL:0000414!6.22e-07!12;CL:0000412!6.22e-07!12;CL:0000182!6.22e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000167;5.37e-13;1!CL:0000164;5.37e-13;1!CL:0000502;5.37e-13;1!CL:0000172;5.37e-13;1!CL:0000173;5.37e-13;1!CL:0000047;3.92e-07;2!CL:0000317;3.92e-07;2!CL:1000448;3.92e-07;2!CL:0002308;3.92e-07;2!CL:0002140;3.92e-07;2 | |ontology_enrichment_celltype_v019=CL:0000167;5.37e-13;1!CL:0000164;5.37e-13;1!CL:0000502;5.37e-13;1!CL:0000172;5.37e-13;1!CL:0000173;5.37e-13;1!CL:0000047;3.92e-07;2!CL:0000317;3.92e-07;2!CL:1000448;3.92e-07;2!CL:0002308;3.92e-07;2!CL:0002140;3.92e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000167,3.33e-13,1;CL:0000164,3.33e-13,1;CL:0000502,3.33e-13,1;CL:0000172,3.33e-13,1;CL:0000173,3.33e-13,1;CL:0002351,3.33e-13,1;CL:0000317,3.93e-07,2;CL:1000448,3.93e-07,2;CL:0002308,3.93e-07,2;CL:0002140,3.93e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.18e-13;1!CL:0002351;5.37e-13;1!UBERON:0003124;5.37e-13;1 | |ontology_enrichment_development_v019=UBERON:0008425;2.18e-13;1!CL:0002351;5.37e-13;1!UBERON:0003124;5.37e-13;1 | ||
|ontology_enrichment_disease=DOID:305!7.59e-14!106;DOID:0050687!6.31e-12!143 | |ontology_enrichment_disease=DOID:305!7.59e-14!106;DOID:0050687!6.31e-12!143 | ||
|ontology_enrichment_disease_v019=DOID:0050619;5.37e-13;1!DOID:1357;5.37e-13;1!DOID:4430;5.37e-13;1!DOID:0050615;6.65e-12;16!DOID:1325;1.38e-07;7!DOID:3904;1.38e-07;7!DOID:1324;1.47e-07;15!DOID:3910;3.92e-07;2 | |ontology_enrichment_disease_v019=DOID:0050619;5.37e-13;1!DOID:1357;5.37e-13;1!DOID:4430;5.37e-13;1!DOID:0050615;6.65e-12;16!DOID:1325;1.38e-07;7!DOID:3904;1.38e-07;7!DOID:1324;1.47e-07;15!DOID:3910;3.92e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4430,3.33e-13,1;DOID:0050619,8.64e-13,1;DOID:1357,8.64e-13,1;DOID:0050615,6.11e-12,16;DOID:1325,1.21e-07,7;DOID:3904,1.21e-07,7;DOID:1324,1.25e-07,15;DOID:3910,2.91e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.54e-15!169;UBERON:0000925!4.54e-15!169;UBERON:0006595!4.54e-15!169;UBERON:0001007!5.24e-15!155;UBERON:0001555!5.24e-15!155;UBERON:0007026!5.24e-15!155;UBERON:0004921!2.86e-13!129;UBERON:0004185!2.86e-13!129;UBERON:0000466!1.27e-11!126;UBERON:0000077!1.41e-11!130;UBERON:0005911!1.62e-11!82;UBERON:0001041!3.70e-10!98;UBERON:0000344!1.50e-09!12;UBERON:0005177!2.03e-09!107;UBERON:0003929!2.20e-09!54;UBERON:0000949!3.22e-08!45;UBERON:0001264!5.82e-08!10;UBERON:0003922!5.82e-08!10;UBERON:0003923!5.82e-08!10;UBERON:0003924!5.82e-08!10;UBERON:0003921!5.82e-08!10;UBERON:0002108!6.59e-08!14;UBERON:0007499!8.23e-08!25;UBERON:0002114!2.13e-07!12;UBERON:0000464!2.13e-07!104;UBERON:0009856!2.13e-07!26;UBERON:0005153!3.75e-07!37;UBERON:0001045!4.04e-07!11;UBERON:0002530!8.61e-07!59;UBERON:0001048!8.66e-07!168 | |ontology_enrichment_uberon=UBERON:0004119!4.54e-15!169;UBERON:0000925!4.54e-15!169;UBERON:0006595!4.54e-15!169;UBERON:0001007!5.24e-15!155;UBERON:0001555!5.24e-15!155;UBERON:0007026!5.24e-15!155;UBERON:0004921!2.86e-13!129;UBERON:0004185!2.86e-13!129;UBERON:0000466!1.27e-11!126;UBERON:0000077!1.41e-11!130;UBERON:0005911!1.62e-11!82;UBERON:0001041!3.70e-10!98;UBERON:0000344!1.50e-09!12;UBERON:0005177!2.03e-09!107;UBERON:0003929!2.20e-09!54;UBERON:0000949!3.22e-08!45;UBERON:0001264!5.82e-08!10;UBERON:0003922!5.82e-08!10;UBERON:0003923!5.82e-08!10;UBERON:0003924!5.82e-08!10;UBERON:0003921!5.82e-08!10;UBERON:0002108!6.59e-08!14;UBERON:0007499!8.23e-08!25;UBERON:0002114!2.13e-07!12;UBERON:0000464!2.13e-07!104;UBERON:0009856!2.13e-07!26;UBERON:0005153!3.75e-07!37;UBERON:0001045!4.04e-07!11;UBERON:0002530!8.61e-07!59;UBERON:0001048!8.66e-07!168 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;5.37e-13;1!UBERON:0001825;5.37e-13;1!UBERON:0000007;3.92e-07;2!UBERON:0002419;3.92e-07;2!UBERON:0004903;3.92e-07;2!UBERON:0007771;3.92e-07;2!UBERON:0003297;3.92e-07;2!UBERON:0001821;3.92e-07;2!UBERON:0003487;3.92e-07;2!UBERON:0001820;3.92e-07;2!UBERON:0002173;3.92e-07;2!UBERON:0002186;3.92e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001764;5.37e-13;1!UBERON:0001825;5.37e-13;1!UBERON:0000007;3.92e-07;2!UBERON:0002419;3.92e-07;2!UBERON:0004903;3.92e-07;2!UBERON:0007771;3.92e-07;2!UBERON:0003297;3.92e-07;2!UBERON:0001821;3.92e-07;2!UBERON:0003487;3.92e-07;2!UBERON:0001820;3.92e-07;2!UBERON:0002173;3.92e-07;2!UBERON:0002186;3.92e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,8.64e-13,1;UBERON:0001825,8.64e-13,1;UBERON:0000007,2.74e-07,2;UBERON:0004903,2.91e-07,2;UBERON:0002173,2.91e-07,2;UBERON:0002186,2.91e-07,2;UBERON:0002419,3.93e-07,2;UBERON:0007771,3.93e-07,2;UBERON:0003297,3.93e-07,2;UBERON:0001821,3.93e-07,2;UBERON:0003487,3.93e-07,2;UBERON:0001820,3.93e-07,2;UBERON:0005089,3.93e-07,2;UBERON:0005088,3.93e-07,2 | |||
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| ||
|short_description=p9@LGALS8 | |short_description=p9@LGALS8 | ||
}} | }} |
Latest revision as of 14:19, 16 September 2015
Short description: | p9@LGALS8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LGALS8_5end |
Coexpression cluster: | NA |
Association with transcript: | -50bp_to_ENST00000341872, ENST00000450372, NM_006499, NM_201543, uc001hxy.1, uc001hxz.1, uc009xgg.1_5end |
EntrezGene: | LGALS8 |
HGNC: | 6569 |
UniProt: | O00214 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 3.33e-13 | 1 |
enteroendocrine cell | 3.33e-13 | 1 |
type D enteroendocrine cell | 3.33e-13 | 1 |
somatostatin secreting cell | 3.33e-13 | 1 |
pancreatic D cell | 3.33e-13 | 1 |
progenitor cell of endocrine pancreas | 3.33e-13 | 1 |
sebum secreting cell | 3.93e-07 | 2 |
epithelial cell of sweat gland | 3.93e-07 | 2 |
epithelial cell of skin gland | 3.93e-07 | 2 |
acinar cell of sebaceous gland | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 8.64e-13 | 1 |
paranasal sinus | 8.64e-13 | 1 |
pituitary gland | 2.74e-07 | 2 |
bronchoalveolar duct junction | 2.91e-07 | 2 |
alveolar duct | 2.91e-07 | 2 |
bronchiole | 2.91e-07 | 2 |
skin gland | 3.93e-07 | 2 |
epidermis gland | 3.93e-07 | 2 |
gland of integumental system | 3.93e-07 | 2 |
sebaceous gland | 3.93e-07 | 2 |
skin sebaceous gland | 3.93e-07 | 2 |
sweat gland | 3.93e-07 | 2 |
sweat gland placode | 3.93e-07 | 2 |
sebaceous gland placode | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 3.33e-13 | 1 |
paranasal sinus cancer | 8.64e-13 | 1 |
maxillary sinus cancer | 8.64e-13 | 1 |
respiratory system cancer | 6.11e-12 | 16 |
bronchus cancer | 1.21e-07 | 7 |
bronchogenic carcinoma | 1.21e-07 | 7 |
lung cancer | 1.25e-07 | 15 |
lung adenocarcinoma | 2.91e-07 | 2 |