FFCP PHASE1:Hg19::chr10:10840645..10840657,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:10840645..10840657,+ | |||
|description=CAGE_peak_at_chr10:10840645..10840657,+ | |description=CAGE_peak_at_chr10:10840645..10840657,+ | ||
|id=chr10:10840645..10840657,+ | |id=chr10:10840645..10840657,+ | ||
|ontology_enrichment_celltype=CL:1000306!2.11e-07!4;CL:0002547!2.11e-07!4 | |ontology_enrichment_celltype=CL:1000306!2.11e-07!4;CL:0002547!2.11e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:1000306;5.53e-22;4!CL:0002547;5.53e-22;4!CL:0000077;7.33e-18;19!CL:0000511;3.57e-11;1!CL:0002625;3.57e-11;1!CL:0000216;3.57e-11;1 | |ontology_enrichment_celltype_v019=CL:1000306;5.53e-22;4!CL:0002547;5.53e-22;4!CL:0000077;7.33e-18;19!CL:0000511;3.57e-11;1!CL:0002625;3.57e-11;1!CL:0000216;3.57e-11;1 | ||
|ontology_enrichment_celltype_v019_2=CL:1000306,7.12e-22,4;CL:0002547,7.12e-22,4;CL:0000077,6.05e-18,19;CL:0000511,3.41e-11,1;CL:0002625,3.41e-11,1;CL:0000216,3.41e-11,1;CL:0000213,1.92e-07,58;CL:0000215,1.92e-07,58;CL:0000076,8.59e-07,63 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.80e-11;1 | |ontology_enrichment_development_v019=UBERON:0000358;4.80e-11;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.20e-13!115;UBERON:0004573!1.05e-09!33;UBERON:0004571!1.05e-09!33;UBERON:0004872!1.94e-09!84;UBERON:0000025!1.70e-08!194;UBERON:0001981!2.47e-08!60;UBERON:0007500!2.47e-08!60;UBERON:0004537!2.47e-08!60;UBERON:0006965!2.47e-08!60;UBERON:0001637!1.20e-07!42;UBERON:0003509!1.20e-07!42;UBERON:0004572!1.20e-07!42;UBERON:0000415!2.11e-07!4;UBERON:0007240!2.11e-07!4;UBERON:0005742!2.11e-07!4;UBERON:0005734!2.11e-07!4;UBERON:0004664!2.11e-07!4;UBERON:0004663!2.11e-07!4;UBERON:0002049!2.96e-07!79;UBERON:0007798!2.96e-07!79;UBERON:0001009!6.70e-07!113;UBERON:0004111!6.94e-07!241;UBERON:0004535!9.55e-07!110 | |ontology_enrichment_uberon=UBERON:0007023!7.20e-13!115;UBERON:0004573!1.05e-09!33;UBERON:0004571!1.05e-09!33;UBERON:0004872!1.94e-09!84;UBERON:0000025!1.70e-08!194;UBERON:0001981!2.47e-08!60;UBERON:0007500!2.47e-08!60;UBERON:0004537!2.47e-08!60;UBERON:0006965!2.47e-08!60;UBERON:0001637!1.20e-07!42;UBERON:0003509!1.20e-07!42;UBERON:0004572!1.20e-07!42;UBERON:0000415!2.11e-07!4;UBERON:0007240!2.11e-07!4;UBERON:0005742!2.11e-07!4;UBERON:0005734!2.11e-07!4;UBERON:0004664!2.11e-07!4;UBERON:0004663!2.11e-07!4;UBERON:0002049!2.96e-07!79;UBERON:0007798!2.96e-07!79;UBERON:0001009!6.70e-07!113;UBERON:0004111!6.94e-07!241;UBERON:0004535!9.55e-07!110 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;5.53e-22;4!UBERON:0000415;5.53e-22;4!UBERON:0007240;5.53e-22;4!UBERON:0005742;5.53e-22;4!UBERON:0005734;5.53e-22;4!UBERON:0004664;5.53e-22;4!UBERON:0004663;5.53e-22;4!UBERON:0001136;3.57e-11;1!UBERON:0001343;3.57e-11;1!UBERON:0004910;3.57e-11;1!UBERON:0004813;3.57e-11;1!UBERON:0005795;9.96e-11;1!UBERON:0007029;9.96e-11;1!UBERON:0000947;1.96e-07;21!UBERON:0010191;1.96e-07;21 | |ontology_enrichment_uberon_v019=UBERON:0004797;5.53e-22;4!UBERON:0000415;5.53e-22;4!UBERON:0007240;5.53e-22;4!UBERON:0005742;5.53e-22;4!UBERON:0005734;5.53e-22;4!UBERON:0004664;5.53e-22;4!UBERON:0004663;5.53e-22;4!UBERON:0001136;3.57e-11;1!UBERON:0001343;3.57e-11;1!UBERON:0004910;3.57e-11;1!UBERON:0004813;3.57e-11;1!UBERON:0005795;9.96e-11;1!UBERON:0007029;9.96e-11;1!UBERON:0000947;1.96e-07;21!UBERON:0010191;1.96e-07;21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,7.12e-22,4;UBERON:0007240,7.12e-22,4;UBERON:0005742,7.12e-22,4;UBERON:0005734,7.12e-22,4;UBERON:0004664,7.12e-22,4;UBERON:0004663,7.12e-22,4;UBERON:0004797,9.13e-13,7;UBERON:0001136,3.41e-11,1;UBERON:0001343,3.41e-11,1;UBERON:0004910,3.41e-11,1;UBERON:0005154,3.41e-11,1;UBERON:0005295,3.41e-11,1;UBERON:0004813,3.41e-11,1;UBERON:0005297,3.41e-11,1;UBERON:0005294,3.41e-11,1;UBERON:0010141,3.41e-11,1;UBERON:0005891,3.41e-11,1;UBERON:0007029,8.22e-11,1;UBERON:0000947,2.16e-07,21;UBERON:0010191,2.16e-07,21;UBERON:0004573,4.56e-07,33;UBERON:0004571,4.56e-07,33 | |||
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| ||
|short_description=p@chr10:10840645..10840657,+ | |short_description=p@chr10:10840645..10840657,+ | ||
}} | }} |
Latest revision as of 10:12, 23 July 2015
Short description: | p@chr10:10840645..10840657, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:10840645..10840657, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 7.12e-22 | 4 |
fibroblast of the aortic adventitia | 7.12e-22 | 4 |
mesothelial cell | 6.05e-18 | 19 |
androgen binding protein secreting cell | 3.41e-11 | 1 |
seminiferous tubule epithelial cell | 3.41e-11 | 1 |
Sertoli cell | 3.41e-11 | 1 |
lining cell | 1.92e-07 | 58 |
barrier cell | 1.92e-07 | 58 |
squamous epithelial cell | 8.59e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
artery wall | 7.12e-22 | 4 |
tunica adventitia of artery | 7.12e-22 | 4 |
adventitia | 7.12e-22 | 4 |
tunica adventitia of blood vessel | 7.12e-22 | 4 |
aorta tunica adventitia | 7.12e-22 | 4 |
aorta wall | 7.12e-22 | 4 |
blood vessel layer | 9.13e-13 | 7 |
mesothelium | 3.41e-11 | 1 |
seminiferous tubule of testis | 3.41e-11 | 1 |
epithelium of male gonad | 3.41e-11 | 1 |
epithelial cord | 3.41e-11 | 1 |
sex cord | 3.41e-11 | 1 |
seminiferous tubule epithelium | 3.41e-11 | 1 |
testis sex cord | 3.41e-11 | 1 |
genital ridge | 3.41e-11 | 1 |
primitive sex cord of indifferent gonad | 3.41e-11 | 1 |
coelomic epithelium | 3.41e-11 | 1 |
surface | 8.22e-11 | 1 |
aorta | 2.16e-07 | 21 |
aortic system | 2.16e-07 | 21 |
systemic artery | 4.56e-07 | 33 |
systemic arterial system | 4.56e-07 | 33 |