FFCP PHASE1:Hg19::chr1:23857252..23857297,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:23857252..23857297,-
|short_description=p5@E2F2
|description=CAGE_peak_5_at_E2F2_5end
|association_with_transcript=414bp_to_ENST00000361729,NM_004091_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1870 | |EntrezGene=1870 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3114 | |HGNC=3114 | ||
|TSSclassifier=strong | |||
|UniProt=Q14209 | |UniProt=Q14209 | ||
|association_with_transcript=414bp_to_ENST00000361729,NM_004091_5end | |||
|cluster_id=chr1:23857252..23857297,- | |||
|description=CAGE_peak_5_at_E2F2_5end | |||
|id=chr1:23857252..23857297,- | |||
|ontology_enrichment_celltype=CL:0000945!3.81e-07!24;CL:0000826!3.81e-07!24;CL:0000542!4.12e-07!53;CL:0000051!4.12e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.44e-14;2!CL:0000242;1.44e-14;2!CL:0000945;1.28e-12;24!CL:0000817;3.20e-08;1!CL:0000785;3.80e-08;1!CL:0000819;3.80e-08;1!CL:0000946;1.18e-07;1!CL:0000786;1.18e-07;1!CL:0000542;9.64e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,2.00e-20,3;CL:0000242,1.54e-14,2;CL:0000785,5.81e-14,2;CL:0000955,5.81e-14,2;CL:0000818,5.81e-14,2;CL:0000954,5.81e-14,2;CL:0000816,5.81e-14,2;CL:0000945,1.20e-12,24;CL:0000826,1.20e-12,24;CL:0000838,9.75e-09,52;CL:0000542,1.52e-08,53;CL:0000051,1.52e-08,53;CL:0000819,3.55e-08,1;CL:0000946,1.75e-07,1;CL:0000786,1.75e-07,1;CL:0000980,1.75e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000954;4.18e-14;2!CL:0000051;9.64e-07;53 | |||
|ontology_enrichment_disease=DOID:162!1.99e-18!235;DOID:14566!1.96e-17!239;DOID:2531!7.72e-12!51;DOID:0060083!7.72e-12!51;DOID:0050686!3.03e-11!137;DOID:0050687!3.76e-10!143;DOID:305!5.19e-10!106;DOID:1240!7.49e-08!39;DOID:0060058!1.43e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.50e-23;10!DOID:0060073;3.80e-08;1!DOID:8675;3.80e-08;1!DOID:2355;5.33e-08;1!DOID:1799;1.18e-07;1!DOID:10165;1.18e-07;1!DOID:1798;1.18e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.02e-23,10;DOID:2531,5.91e-09,51;DOID:0060083,5.91e-09,51;DOID:0060073,3.55e-08,1;DOID:8675,3.55e-08,1;DOID:2355,6.10e-08,1;DOID:1799,1.99e-07,1;DOID:10165,1.99e-07,1;DOID:1798,1.99e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!3.72e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.63e-14;2!UBERON:0005058;2.63e-14;2!UBERON:0009113;2.63e-14;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.31e-07,4;UBERON:0005058,1.31e-07,4;UBERON:0009113,1.31e-07,4;UBERON:0003295,1.31e-07,4;UBERON:0005562,1.31e-07,4 | |||
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| ||
|short_description=p5@E2F2 | |||
}} | }} |
Latest revision as of 16:01, 16 September 2015
Short description: | p5@E2F2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_E2F2_5end |
Coexpression cluster: | NA |
Association with transcript: | 414bp_to_ENST00000361729, NM_004091_5end |
EntrezGene: | E2F2 |
HGNC: | 3114 |
UniProt: | Q14209 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 2.00e-20 | 3 |
Merkel cell | 1.54e-14 | 2 |
mature B cell | 5.81e-14 | 2 |
pre-B-II cell | 5.81e-14 | 2 |
transitional stage B cell | 5.81e-14 | 2 |
small pre-B-II cell | 5.81e-14 | 2 |
immature B cell | 5.81e-14 | 2 |
lymphocyte of B lineage | 1.20e-12 | 24 |
pro-B cell | 1.20e-12 | 24 |
lymphoid lineage restricted progenitor cell | 9.75e-09 | 52 |
lymphocyte | 1.52e-08 | 53 |
common lymphoid progenitor | 1.52e-08 | 53 |
B-1 B cell | 3.55e-08 | 1 |
antibody secreting cell | 1.75e-07 | 1 |
plasma cell | 1.75e-07 | 1 |
plasmablast | 1.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.31e-07 | 4 |
hemolymphoid system gland | 1.31e-07 | 4 |
thymic region | 1.31e-07 | 4 |
pharyngeal gland | 1.31e-07 | 4 |
thymus primordium | 1.31e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.02e-23 | 10 |
hematologic cancer | 5.91e-09 | 51 |
immune system cancer | 5.91e-09 | 51 |
lymphatic system cancer | 3.55e-08 | 1 |
lymphosarcoma | 3.55e-08 | 1 |
anemia | 6.10e-08 | 1 |
islet cell tumor | 1.99e-07 | 1 |
endocrine pancreas cancer | 1.99e-07 | 1 |
pancreatic endocrine carcinoma | 1.99e-07 | 1 |