FFCP PHASE1:Hg19::chr1:236046879..236046882,-: Difference between revisions
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|id=chr1:236046879..236046882,-
|short_description=p24@LYST
|description=CAGE_peak_24_at_LYST_5end
|association_with_transcript=-7bp_to_ENST00000536965_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1130 | |EntrezGene=1130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1968 | |HGNC=1968 | ||
|TSSclassifier=strong | |||
|UniProt=F5H074 | |UniProt=F5H074 | ||
|association_with_transcript=-7bp_to_ENST00000536965_5end | |||
|cluster_id=chr1:236046879..236046882,- | |||
|coexpression_cluster_id=C610 | |||
|description=CAGE_peak_24_at_LYST_5end | |||
|id=chr1:236046879..236046882,- | |||
|ontology_enrichment_celltype=CL:0000148!1.67e-42!10;CL:0000541!1.67e-42!10;CL:0000147!2.60e-30!14;CL:0000710!3.78e-21!20;CL:0002567!4.90e-17!3;CL:0000075!1.37e-15!27;CL:0002566!3.76e-13!1;CL:0000333!6.25e-13!41;CL:0002077!1.07e-12!33;CL:0000325!1.10e-10!39;CL:0000133!6.28e-09!59;CL:0000221!2.37e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.97e-63;10!CL:0002567;3.28e-53;3!CL:0000147;1.76e-45;14!CL:0000710;3.98e-32;20!CL:0000075;4.97e-24;27!CL:0002077;1.87e-17;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.49e-63,10;CL:0000541,3.49e-63,10;CL:0002567,2.87e-53,3;CL:0000147,1.98e-45,14;CL:0000710,4.31e-32,20;CL:0000075,5.28e-24,27;CL:0002077,3.10e-19,34;CL:0000333,2.26e-15,41;CL:0000133,4.78e-11,59;CL:0000221,3.20e-09,72 | |||
|ontology_enrichment_development_v019=CL:0000133;1.47e-07;59 | |||
|ontology_enrichment_disease=DOID:1909!6.29e-25!2;DOID:0060060!5.38e-13!1;DOID:0060061!5.38e-13!1;DOID:8691!5.38e-13!1 | |||
|ontology_enrichment_disease_v019=DOID:1909;3.81e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.11e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0002363!1.09e-12!1;UBERON:0007647!1.09e-12!1;UBERON:0010115!1.09e-12!1;UBERON:0001905!3.48e-07!2;UBERON:0002757!3.48e-07!2;UBERON:0010134!3.48e-07!2;UBERON:0002784!3.48e-07!2;UBERON:0005408!3.48e-07!2;UBERON:0001899!3.48e-07!2;UBERON:0002360!5.60e-07!2;UBERON:0000094!5.60e-07!2;UBERON:0007645!5.60e-07!2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p24@LYST | |||
}} | }} |
Latest revision as of 13:25, 16 September 2015
Short description: | p24@LYST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_LYST_5end |
Coexpression cluster: | C610_melanoma_Melanocyte_migratory_mycosis_cerebellum_epithelioid_retina |
Association with transcript: | -7bp_to_ENST00000536965_5end |
EntrezGene: | LYST |
HGNC: | 1968 |
UniProt: | F5H074 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.49e-63 | 10 |
melanoblast | 3.49e-63 | 10 |
light melanocyte | 2.87e-53 | 3 |
pigment cell | 1.98e-45 | 14 |
neurecto-epithelial cell | 4.31e-32 | 20 |
columnar/cuboidal epithelial cell | 5.28e-24 | 27 |
ecto-epithelial cell | 3.10e-19 | 34 |
migratory neural crest cell | 2.26e-15 | 41 |
neurectodermal cell | 4.78e-11 | 59 |
ectodermal cell | 3.20e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.11e-21 | 2 |