FFCP PHASE1:Hg19::chr11:75063238..75063247,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=408 | |EntrezGene=408 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=711 | |HGNC=711 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z1Q3,P49407 | |UniProt=B7Z1Q3,P49407 | ||
|association_with_transcript=-363bp_to_NM_004041,NM_020251_5end | |association_with_transcript=-363bp_to_NM_004041,NM_020251_5end | ||
|cluster_id=chr11:75063238..75063247,- | |||
|description=CAGE_peak_16_at_ARRB1_5end | |description=CAGE_peak_16_at_ARRB1_5end | ||
|id=chr11:75063238..75063247,- | |id=chr11:75063238..75063247,- | ||
|ontology_enrichment_celltype=CL:0002322!3.12e-14!5;CL:0000039!7.82e-10!7;CL:0000586!7.82e-10!7 | |ontology_enrichment_celltype=CL:0002322!3.12e-14!5;CL:0000039!7.82e-10!7;CL:0000586!7.82e-10!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.81e-41;7!CL:0000586;3.81e-41;7 | |ontology_enrichment_celltype_v019=CL:0000039;3.81e-41;7!CL:0000586;3.81e-41;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.20e-41,7;CL:0000586,5.20e-41,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.22e-44;10!UBERON:0005564;1.22e-44;10 | |ontology_enrichment_development_v019=UBERON:0009117;1.22e-44;10!UBERON:0005564;1.22e-44;10 | ||
|ontology_enrichment_disease=DOID:8692!5.96e-12!31;DOID:3095!3.83e-10!22;DOID:2994!3.83e-10!22;DOID:1240!7.56e-09!39;DOID:2531!4.73e-07!51;DOID:0060083!4.73e-07!51 | |ontology_enrichment_disease=DOID:8692!5.96e-12!31;DOID:3095!3.83e-10!22;DOID:2994!3.83e-10!22;DOID:1240!7.56e-09!39;DOID:2531!4.73e-07!51;DOID:0060083!4.73e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.92e-20;22!DOID:2994;1.92e-20;22 | |ontology_enrichment_disease_v019=DOID:3095;1.92e-20;22!DOID:2994;1.92e-20;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,2.31e-20,22;DOID:2994,2.31e-20,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!7.54e-09!8 | |ontology_enrichment_uberon=UBERON:0000473!7.54e-09!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.46e-36;8!UBERON:0003135;2.18e-26;11!UBERON:0000991;2.09e-21;21!UBERON:0003101;2.06e-13;22!UBERON:0000079;2.06e-13;22!UBERON:0002323;4.46e-08;45!UBERON:0000922;1.69e-07;49!UBERON:0003133;4.03e-07;44 | |ontology_enrichment_uberon_v019=UBERON:0000473;4.46e-36;8!UBERON:0003135;2.18e-26;11!UBERON:0000991;2.09e-21;21!UBERON:0003101;2.06e-13;22!UBERON:0000079;2.06e-13;22!UBERON:0002323;4.46e-08;45!UBERON:0000922;1.69e-07;49!UBERON:0003133;4.03e-07;44 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.85e-36,8;UBERON:0003135,2.66e-26,11;UBERON:0000991,2.53e-21,21;UBERON:0009196,2.53e-21,21;UBERON:0009117,2.53e-21,21;UBERON:0005564,2.53e-21,21;UBERON:0004176,2.31e-20,22;UBERON:0003101,2.27e-13,22;UBERON:0000079,2.27e-13,22;UBERON:0002323,8.37e-10,46;UBERON:0003133,2.13e-09,48;UBERON:0004458,3.31e-09,49;UBERON:0003886,2.34e-08,54;UBERON:0005156,1.19e-07,59;UBERON:0000990,1.19e-07,59;UBERON:0002553,2.12e-07,61 | |||
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| ||
|short_description=p16@ARRB1 | |short_description=p16@ARRB1 | ||
}} | }} |
Latest revision as of 05:59, 20 September 2015
Short description: | p16@ARRB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_ARRB1_5end |
Coexpression cluster: | NA |
Association with transcript: | -363bp_to_NM_004041, NM_020251_5end |
EntrezGene: | ARRB1 |
HGNC: | 711 |
UniProt: | B7Z1Q3P49407 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.20e-41 | 7 |
germ cell | 5.20e-41 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 5.85e-36 | 8 |
male reproductive organ | 2.66e-26 | 11 |
gonad | 2.53e-21 | 21 |
indifferent external genitalia | 2.53e-21 | 21 |
indifferent gonad | 2.53e-21 | 21 |
gonad primordium | 2.53e-21 | 21 |
external genitalia | 2.31e-20 | 22 |
male organism | 2.27e-13 | 22 |
male reproductive system | 2.27e-13 | 22 |
body cavity | 8.37e-10 | 46 |
reproductive organ | 2.13e-09 | 48 |
body cavity or lining | 3.31e-09 | 49 |
body cavity precursor | 2.34e-08 | 54 |
reproductive structure | 1.19e-07 | 59 |
reproductive system | 1.19e-07 | 59 |
anatomical cavity | 2.12e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.31e-20 | 22 |
germ cell cancer | 2.31e-20 | 22 |