FFCP PHASE1:Hg19::chr1:236030297..236030335,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:236030297..236030335,-
|short_description=p4@LYST
|description=CAGE_peak_4_at_LYST_5end
|association_with_transcript=-77bp_to_ENST00000389793,ENST000003897...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1130 | |EntrezGene=1130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1968 | |HGNC=1968 | ||
|TSSclassifier=strong | |||
|UniProt=Q99698 | |UniProt=Q99698 | ||
|association_with_transcript=-77bp_to_ENST00000389793,ENST00000389794,NM_000081,uc001hxj.2,uc001hxn.1_5end | |||
|cluster_id=chr1:236030297..236030335,- | |||
|description=CAGE_peak_4_at_LYST_5end | |||
|id=chr1:236030297..236030335,- | |||
|ontology_enrichment_celltype=CL:0000557!2.22e-10!71;CL:0000766!2.79e-10!76;CL:0000763!8.36e-10!112;CL:0000049!8.36e-10!112;CL:0000839!9.03e-10!70;CL:0002194!1.59e-08!63;CL:0000576!1.59e-08!63;CL:0000040!1.59e-08!63;CL:0000559!1.59e-08!63;CL:0002009!1.92e-08!65;CL:0002057!6.86e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.30e-07;39!CL:0000234;1.30e-07;39!CL:0000576;7.31e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.45e-13,72;CL:0000557,1.35e-12,67;CL:0000839,4.01e-12,66;CL:0000763,1.00e-11,108;CL:0000049,1.00e-11,108;CL:0002194,5.37e-11,59;CL:0000576,5.37e-11,59;CL:0000040,5.37e-11,59;CL:0000559,5.37e-11,59;CL:0002009,3.41e-10,61;CL:0000473,4.39e-08,48;CL:0000234,4.39e-08,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.83e-33!115;UBERON:0001049!3.72e-17!57;UBERON:0005068!3.72e-17!57;UBERON:0006241!3.72e-17!57;UBERON:0007135!3.72e-17!57;UBERON:0002616!2.62e-15!59;UBERON:0000955!8.44e-15!69;UBERON:0006238!8.44e-15!69;UBERON:0001017!1.60e-13!82;UBERON:0002193!4.46e-13!112;UBERON:0005743!1.90e-12!86;UBERON:0003080!7.31e-12!42;UBERON:0000073!7.89e-12!94;UBERON:0001016!7.89e-12!94;UBERON:0002780!2.08e-11!41;UBERON:0001890!2.08e-11!41;UBERON:0006240!2.08e-11!41;UBERON:0002390!3.62e-11!102;UBERON:0003061!3.62e-11!102;UBERON:0003075!3.94e-11!86;UBERON:0007284!3.94e-11!86;UBERON:0001893!8.05e-11!34;UBERON:0002020!9.56e-11!34;UBERON:0003528!9.56e-11!34;UBERON:0002791!2.40e-10!33;UBERON:0002346!3.08e-10!90;UBERON:0001474!7.77e-10!86;UBERON:0001869!9.10e-10!32;UBERON:0002371!1.36e-09!80;UBERON:0002405!2.71e-09!115;UBERON:0004765!4.31e-08!101;UBERON:0001434!4.31e-08!101;UBERON:0000153!9.47e-08!129;UBERON:0007811!9.47e-08!129;UBERON:0000033!1.66e-07!123;UBERON:0002619!2.05e-07!22;UBERON:0003056!2.79e-07!61;UBERON:0000956!3.28e-07!25;UBERON:0000203!3.28e-07!25;UBERON:0000480!6.26e-07!626;UBERON:0000467!6.39e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.83e-10;53!UBERON:0002616;2.83e-10;53!UBERON:0003528;6.64e-10;34!UBERON:0002020;6.64e-10;34!UBERON:0001893;1.17e-09;34!UBERON:0002780;1.58e-09;41!UBERON:0001890;1.58e-09;41!UBERON:0002791;3.73e-09;32!UBERON:0001869;4.62e-09;32!UBERON:0002619;9.21e-09;22!UBERON:0007023;1.58e-08;114!UBERON:0000956;9.46e-08;25!UBERON:0000203;9.46e-08;25!UBERON:0001950;9.80e-08;20!UBERON:0000955;3.51e-07;68!UBERON:0001017;5.26e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.75e-36,114;UBERON:0001049,3.66e-18,56;UBERON:0005068,3.66e-18,56;UBERON:0006241,3.66e-18,56;UBERON:0007135,3.66e-18,56;UBERON:0000073,2.37e-16,53;UBERON:0002616,2.37e-16,53;UBERON:0000955,1.19e-14,68;UBERON:0006238,1.19e-14,68;UBERON:0001017,2.39e-14,81;UBERON:0002193,4.68e-14,108;UBERON:0003075,2.00e-13,82;UBERON:0007284,2.00e-13,82;UBERON:0002390,4.72e-13,98;UBERON:0003061,4.72e-13,98;UBERON:0002780,7.93e-13,41;UBERON:0001890,7.93e-13,41;UBERON:0003080,7.93e-13,41;UBERON:0006240,7.93e-13,41;UBERON:0002405,1.10e-12,93;UBERON:0001016,1.31e-12,89;UBERON:0001893,4.78e-12,34;UBERON:0003528,5.91e-12,34;UBERON:0002020,5.91e-12,34;UBERON:0002346,5.95e-12,86;UBERON:0002371,9.45e-12,76;UBERON:0001474,1.62e-11,82;UBERON:0002791,8.51e-11,32;UBERON:0001869,1.07e-10,32;UBERON:0010314,1.26e-10,132;UBERON:0004765,2.04e-09,90;UBERON:0001434,3.68e-09,100;UBERON:0010371,4.12e-09,104;UBERON:0002619,4.87e-09,22;UBERON:0003081,3.60e-08,203;UBERON:0003056,5.31e-08,61;UBERON:0000956,6.02e-08,25;UBERON:0000203,6.02e-08,25;UBERON:0001950,6.24e-08,20;UBERON:0000923,7.04e-07,560;UBERON:0010316,7.04e-07,560;UBERON:0005291,7.04e-07,560;UBERON:0006598,7.04e-07,560;UBERON:0010317,7.04e-07,560;UBERON:0002532,7.04e-07,560 | |||
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|short_description=p4@LYST | |||
}} | }} |
Latest revision as of 13:16, 16 September 2015
Short description: | p4@LYST |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LYST_5end |
Coexpression cluster: | NA |
Association with transcript: | -77bp_to_ENST00000389793, ENST00000389794, NM_000081, uc001hxj.2, uc001hxn.1_5end |
EntrezGene: | LYST |
HGNC: | 1968 |
UniProt: | Q99698 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.45e-13 | 72 |
granulocyte monocyte progenitor cell | 1.35e-12 | 67 |
myeloid lineage restricted progenitor cell | 4.01e-12 | 66 |
myeloid cell | 1.00e-11 | 108 |
common myeloid progenitor | 1.00e-11 | 108 |
monopoietic cell | 5.37e-11 | 59 |
monocyte | 5.37e-11 | 59 |
monoblast | 5.37e-11 | 59 |
promonocyte | 5.37e-11 | 59 |
macrophage dendritic cell progenitor | 3.41e-10 | 61 |
defensive cell | 4.39e-08 | 48 |
phagocyte | 4.39e-08 | 48 |