FFCP PHASE1:Hg19::chr2:145116694..145116698,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:145116694..145116698,+ | |||
|coexpression_cluster_id=C122 | |coexpression_cluster_id=C122 | ||
|description=CAGE_peak_at_chr2:145116694..145116698,+ | |description=CAGE_peak_at_chr2:145116694..145116698,+ | ||
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|ontology_enrichment_celltype=CL:0000945!4.26e-12!24;CL:0000826!4.26e-12!24;CL:0000542!2.52e-07!53;CL:0000051!2.52e-07!53;CL:0000817!5.85e-07!3 | |ontology_enrichment_celltype=CL:0000945!4.26e-12!24;CL:0000826!4.26e-12!24;CL:0000542!2.52e-07!53;CL:0000051!2.52e-07!53;CL:0000817!5.85e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000946;9.91e-13;1!CL:0000786;9.91e-13;1!CL:0000785;2.60e-12;1!CL:1001319;2.60e-12;1!CL:1000600;2.60e-12;1!CL:0000819;2.60e-12;1!CL:0000945;1.27e-11;24!CL:0000542;8.70e-08;53 | |ontology_enrichment_celltype_v019=CL:0000946;9.91e-13;1!CL:0000786;9.91e-13;1!CL:0000785;2.60e-12;1!CL:1001319;2.60e-12;1!CL:1000600;2.60e-12;1!CL:0000819;2.60e-12;1!CL:0000945;1.27e-11;24!CL:0000542;8.70e-08;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000785,2.49e-23,2;CL:0000955,2.49e-23,2;CL:0000818,2.49e-23,2;CL:0000954,2.49e-23,2;CL:0000816,2.49e-23,2;CL:0000817,6.74e-16,3;CL:0000946,9.92e-13,1;CL:0000786,9.92e-13,1;CL:0000980,9.92e-13,1;CL:0000542,1.27e-12,53;CL:0000051,1.27e-12,53;CL:0000819,2.20e-12,1;CL:1001319,4.81e-12,1;CL:1000600,4.81e-12,1;CL:0000945,1.21e-11,24;CL:0000826,1.21e-11,24;CL:0000838,6.69e-10,52;CL:0000988,9.64e-09,177;CL:0002032,3.18e-08,161;CL:0000837,3.18e-08,161;CL:0000037,8.27e-08,168 | |||
|ontology_enrichment_development_v019=CL:0000954;2.94e-23;2!CL:0000051;8.70e-08;53 | |ontology_enrichment_development_v019=CL:0000954;2.94e-23;2!CL:0000051;8.70e-08;53 | ||
|ontology_enrichment_disease=DOID:162!3.17e-14!235;DOID:14566!1.33e-13!239;DOID:0060058!4.66e-13!10;DOID:2531!9.76e-13!51;DOID:0060083!9.76e-13!51;DOID:0050686!3.32e-10!137;DOID:1036!1.41e-09!8 | |ontology_enrichment_disease=DOID:162!3.17e-14!235;DOID:14566!1.33e-13!239;DOID:0060058!4.66e-13!10;DOID:2531!9.76e-13!51;DOID:0060083!9.76e-13!51;DOID:0050686!3.32e-10!137;DOID:1036!1.41e-09!8 | ||
|ontology_enrichment_disease_v019=DOID:0060058;3.74e-18;10!DOID:2531;3.43e-14;51!DOID:0060083;3.43e-14;51!DOID:1036;3.94e-13;8!DOID:12603;1.18e-12;1!DOID:4960;2.60e-12;1!DOID:0060073;2.60e-12;1!DOID:0070004;2.60e-12;1!DOID:8675;2.60e-12;1!DOID:1240;1.84e-08;39!DOID:1909;8.76e-07;2 | |ontology_enrichment_disease_v019=DOID:0060058;3.74e-18;10!DOID:2531;3.43e-14;51!DOID:0060083;3.43e-14;51!DOID:1036;3.94e-13;8!DOID:12603;1.18e-12;1!DOID:4960;2.60e-12;1!DOID:0060073;2.60e-12;1!DOID:0070004;2.60e-12;1!DOID:8675;2.60e-12;1!DOID:1240;1.84e-08;39!DOID:1909;8.76e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,6.45e-25,51;DOID:0060083,6.45e-25,51;DOID:0060058,3.91e-18,10;DOID:1036,2.60e-13,8;DOID:12603,1.25e-12,1;DOID:0060073,2.20e-12,1;DOID:8675,2.20e-12,1;DOID:4960,2.46e-12,1;DOID:0070004,2.46e-12,1;DOID:1240,5.66e-10,39;DOID:0050686,2.99e-08,137;DOID:1909,9.02e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;2.60e-12;1!UBERON:0001256;2.60e-12;1!UBERON:0001259;2.60e-12;1!UBERON:0001255;8.76e-07;2!UBERON:0001556;8.76e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0004645;2.60e-12;1!UBERON:0001256;2.60e-12;1!UBERON:0001259;2.60e-12;1!UBERON:0001255;8.76e-07;2!UBERON:0001556;8.76e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,4.81e-12,1;UBERON:0001256,4.81e-12,1;UBERON:0001259,4.81e-12,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.328402357799783,0.550975469195755,0,0,0,0.919421224478927,0,0,5.57763844178172,7.2506308568585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557052284425868,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504867548488229,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0.207322110030741,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0.275673144969061,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0.245040215981032,2.04383492638291,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,1.11362469558097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,1.15362711958732,0,0,0,0,0,0.861593638227486,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,1.57916962432026,0.588187602953219,0.839107934879214,29.0323211068003,0.476809736941136,0.210998064528027,0,0.141353071433941,0,0,0,0,1.48260564340311,0.247127877893006,0.104421949505455,0,0,0,1.45963831372533,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0,0.609414446062818,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0.160317640503067,0,0.19980960958213,0.144090417154106,0,0,0,0.248505071130865,0,0.135904206073614,0.104602846312333,0,0.288950589901519,0,0,0,0,2.10309883423452,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592713324460491,0,0,0,0.137539436597234,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,1.19730191562487,1.80603545648546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36484205787483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.477890301491107,0,0.931577741257556,0,0,0.521745061811734,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0,0.327130788511688,0.327609848846413,0,0.211312123358627,0.59996218756479,0,1.37771983728653,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0,4.03318956445227,0,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0,0,0.869291361512897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0.764859003745869,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.33639558774184,0,0,0,0,0,0,0,1.05824249194267,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0.961705476909699 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.328402357799783,0.550975469195755,0,0,0,0.919421224478927,0,0,5.57763844178172,7.2506308568585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557052284425868,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504867548488229,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0.207322110030741,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0.275673144969061,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0.245040215981032,2.04383492638291,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,1.11362469558097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,1.15362711958732,0,0,0,0,0,0.861593638227486,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,1.57916962432026,0.588187602953219,0.839107934879214,29.0323211068003,0.476809736941136,0.210998064528027,0,0.141353071433941,0,0,0,0,1.48260564340311,0.247127877893006,0.104421949505455,0,0,0,1.45963831372533,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0,0.609414446062818,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0.160317640503067,0,0.19980960958213,0.144090417154106,0,0,0,0.248505071130865,0,0.135904206073614,0.104602846312333,0,0.288950589901519,0,0,0,0,2.10309883423452,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592713324460491,0,0,0,0.137539436597234,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,1.19730191562487,1.80603545648546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36484205787483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.477890301491107,0,0.931577741257556,0,0,0.521745061811734,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0,0.327130788511688,0.327609848846413,0,0.211312123358627,0.59996218756479,0,1.37771983728653,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0,4.03318956445227,0,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0,0,0.869291361512897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0.764859003745869,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.33639558774184,0,0,0,0,0,0,0,1.05824249194267,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0.961705476909699 | ||
|short_description=p@chr2:145116694..145116698,+ | |short_description=p@chr2:145116694..145116698,+ | ||
}} | }} |
Latest revision as of 00:52, 29 July 2015
Short description: | p@chr2:145116694..145116698, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:145116694..145116698, + |
Coexpression cluster: | C122_chronic_Reticulocytes_skeletal_leukemia_acute_colon_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature B cell | 2.49e-23 | 2 |
pre-B-II cell | 2.49e-23 | 2 |
transitional stage B cell | 2.49e-23 | 2 |
small pre-B-II cell | 2.49e-23 | 2 |
immature B cell | 2.49e-23 | 2 |
precursor B cell | 6.74e-16 | 3 |
antibody secreting cell | 9.92e-13 | 1 |
plasma cell | 9.92e-13 | 1 |
plasmablast | 9.92e-13 | 1 |
lymphocyte | 1.27e-12 | 53 |
common lymphoid progenitor | 1.27e-12 | 53 |
B-1 B cell | 2.20e-12 | 1 |
bladder cell | 4.81e-12 | 1 |
lower urinary tract cell | 4.81e-12 | 1 |
lymphocyte of B lineage | 1.21e-11 | 24 |
pro-B cell | 1.21e-11 | 24 |
lymphoid lineage restricted progenitor cell | 6.69e-10 | 52 |
hematopoietic cell | 9.64e-09 | 177 |
hematopoietic oligopotent progenitor cell | 3.18e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.18e-08 | 161 |
hematopoietic stem cell | 8.27e-08 | 168 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 4.81e-12 | 1 |
wall of urinary bladder | 4.81e-12 | 1 |
mucosa of urinary bladder | 4.81e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.45e-25 | 51 |
immune system cancer | 6.45e-25 | 51 |
lymphoma | 3.91e-18 | 10 |
chronic leukemia | 2.60e-13 | 8 |
acute leukemia | 1.25e-12 | 1 |
lymphatic system cancer | 2.20e-12 | 1 |
lymphosarcoma | 2.20e-12 | 1 |
bone marrow cancer | 2.46e-12 | 1 |
myeloma | 2.46e-12 | 1 |
leukemia | 5.66e-10 | 39 |
organ system cancer | 2.99e-08 | 137 |
melanoma | 9.02e-07 | 2 |