FFCP PHASE1:Hg19::chr3:100428165..100428186,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10342 | |EntrezGene=10342 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11758 | |HGNC=11758 | ||
|TSSclassifier=strong | |||
|UniProt=Q05BK6,Q92734 | |UniProt=Q05BK6,Q92734 | ||
|association_with_transcript=0bp_to_NM_001195479,NM_006070_5end | |association_with_transcript=0bp_to_NM_001195479,NM_006070_5end | ||
|cluster_id=chr3:100428165..100428186,+ | |||
|description=CAGE_peak_6_at_TFG_5end | |description=CAGE_peak_6_at_TFG_5end | ||
|id=chr3:100428165..100428186,+ | |id=chr3:100428165..100428186,+ | ||
|ontology_enrichment_celltype=CL:0000542!4.85e-17!53;CL:0000051!4.85e-17!53;CL:0000838!1.66e-16!52;CL:0000945!1.62e-10!24;CL:0000826!1.62e-10!24;CL:0000236!2.28e-09!14;CL:0000791!3.91e-08!18;CL:0000789!3.91e-08!18;CL:0002420!3.91e-08!18;CL:0002419!3.91e-08!18;CL:0000790!3.91e-08!18;CL:0002319!1.46e-07!25 | |ontology_enrichment_celltype=CL:0000542!4.85e-17!53;CL:0000051!4.85e-17!53;CL:0000838!1.66e-16!52;CL:0000945!1.62e-10!24;CL:0000826!1.62e-10!24;CL:0000236!2.28e-09!14;CL:0000791!3.91e-08!18;CL:0000789!3.91e-08!18;CL:0002420!3.91e-08!18;CL:0002419!3.91e-08!18;CL:0000790!3.91e-08!18;CL:0002319!1.46e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000945;4.61e-11;24!CL:0000542;7.88e-11;53!CL:0000236;3.69e-09;13!CL:0000791;1.22e-08;18!CL:0000789;1.22e-08;18!CL:0002419;1.22e-08;18!CL:0002319;5.22e-08;25!CL:0000084;9.56e-07;25 | |ontology_enrichment_celltype_v019=CL:0000945;4.61e-11;24!CL:0000542;7.88e-11;53!CL:0000236;3.69e-09;13!CL:0000791;1.22e-08;18!CL:0000789;1.22e-08;18!CL:0002419;1.22e-08;18!CL:0002319;5.22e-08;25!CL:0000084;9.56e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.55e-17,53;CL:0000051,3.55e-17,53;CL:0000838,1.25e-16,52;CL:0000945,9.48e-11,24;CL:0000826,9.48e-11,24;CL:0000236,1.43e-09,14;CL:0000791,2.64e-08,18;CL:0000789,2.64e-08,18;CL:0002420,2.64e-08,18;CL:0002419,2.64e-08,18;CL:0000790,2.64e-08,18;CL:0002319,1.04e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000051;7.88e-11;53!CL:0000790;1.22e-08;18 | |ontology_enrichment_development_v019=CL:0000051;7.88e-11;53!CL:0000790;1.22e-08;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.42e-09!94;UBERON:0001016!1.42e-09!94;UBERON:0005743!2.17e-08!86;UBERON:0001017!2.29e-07!82;UBERON:0000924!8.76e-07!173;UBERON:0006601!8.76e-07!173 | |ontology_enrichment_uberon=UBERON:0000073!1.42e-09!94;UBERON:0001016!1.42e-09!94;UBERON:0005743!2.17e-08!86;UBERON:0001017!2.29e-07!82;UBERON:0000924!8.76e-07!173;UBERON:0006601!8.76e-07!173 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.06e-09,89;UBERON:0001017,4.63e-08,81;UBERON:0004121,5.64e-07,171;UBERON:0000924,5.64e-07,171;UBERON:0006601,5.64e-07,171;UBERON:0011216,8.05e-07,223 | |||
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| ||
|short_description=p6@TFG | |short_description=p6@TFG | ||
}} | }} |
Latest revision as of 05:27, 19 September 2015
Short description: | p6@TFG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TFG_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001195479, NM_006070_5end |
EntrezGene: | TFG |
HGNC: | 11758 |
UniProt: | Q05BK6Q92734 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.55e-17 | 53 |
common lymphoid progenitor | 3.55e-17 | 53 |
lymphoid lineage restricted progenitor cell | 1.25e-16 | 52 |
lymphocyte of B lineage | 9.48e-11 | 24 |
pro-B cell | 9.48e-11 | 24 |
B cell | 1.43e-09 | 14 |
mature alpha-beta T cell | 2.64e-08 | 18 |
alpha-beta T cell | 2.64e-08 | 18 |
immature T cell | 2.64e-08 | 18 |
mature T cell | 2.64e-08 | 18 |
immature alpha-beta T cell | 2.64e-08 | 18 |
neural cell | 1.04e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.06e-09 | 89 |
central nervous system | 4.63e-08 | 81 |
ectoderm-derived structure | 5.64e-07 | 171 |
ectoderm | 5.64e-07 | 171 |
presumptive ectoderm | 5.64e-07 | 171 |
organ system subdivision | 8.05e-07 | 223 |