FFCP PHASE1:Hg19::chr1:78392475..78392503,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91624 | |EntrezGene=91624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29557 | |HGNC=29557 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=221bp_to_ENST00000464998_5end | |association_with_transcript=221bp_to_ENST00000464998_5end | ||
|cluster_id=chr1:78392475..78392503,+ | |||
|description=CAGE_peak_9_at_NEXN_5end | |description=CAGE_peak_9_at_NEXN_5end | ||
|id=chr1:78392475..78392503,+ | |id=chr1:78392475..78392503,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.99e-15!42;CL:0000860!2.21e-13!45;CL:0002194!1.18e-11!63;CL:0000576!1.18e-11!63;CL:0000040!1.18e-11!63;CL:0000559!1.18e-11!63;CL:0002009!7.09e-11!65;CL:0000839!1.26e-09!70;CL:0000557!2.62e-09!71;CL:0002087!2.38e-08!119;CL:0000766!2.50e-08!76;CL:0000763!7.13e-08!112;CL:0000049!7.13e-08!112;CL:0000037!4.86e-07!172;CL:0000566!4.86e-07!172 | |ontology_enrichment_celltype=CL:0002057!2.99e-15!42;CL:0000860!2.21e-13!45;CL:0002194!1.18e-11!63;CL:0000576!1.18e-11!63;CL:0000040!1.18e-11!63;CL:0000559!1.18e-11!63;CL:0002009!7.09e-11!65;CL:0000839!1.26e-09!70;CL:0000557!2.62e-09!71;CL:0002087!2.38e-08!119;CL:0000766!2.50e-08!76;CL:0000763!7.13e-08!112;CL:0000049!7.13e-08!112;CL:0000037!4.86e-07!172;CL:0000566!4.86e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.36e-08;33!CL:0002057;1.36e-08;33!CL:0002097;3.46e-08;2 | |ontology_enrichment_celltype_v019=CL:0000860;1.36e-08;33!CL:0002057;1.36e-08;33!CL:0002097;3.46e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.10e-08,115;CL:0002032,1.15e-08,161;CL:0000837,1.15e-08,161;CL:0002097,3.01e-08,2;CL:0002031,3.96e-08,120;CL:0000988,4.03e-08,177;CL:0000037,4.63e-08,168;CL:0000860,6.66e-07,42;CL:0002057,6.66e-07,42 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1240;1.49e-07;39 | |ontology_enrichment_disease_v019=DOID:1240;1.49e-07;39 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,1.17e-08,39;DOID:2531,1.77e-07,51;DOID:0060083,1.77e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002371!7.11e-08!80;UBERON:0001474!3.11e-07!86;UBERON:0004765!3.78e-07!101;UBERON:0001434!3.78e-07!101;UBERON:0002390!9.20e-07!102;UBERON:0003061!9.20e-07!102 | |ontology_enrichment_uberon=UBERON:0002371!7.11e-08!80;UBERON:0001474!3.11e-07!86;UBERON:0004765!3.78e-07!101;UBERON:0001434!3.78e-07!101;UBERON:0002390!9.20e-07!102;UBERON:0003061!9.20e-07!102 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,1.49870366723688,1.12763523276777,0,0.446961094427288,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0,0.125542639594803,1.60468152070698,1.80621296789881,1.73163718890094,0,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0.485168122375632,0,0,0.619412741790207,0.863077176966451,0.512321413058201,1.89185783910868,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.224723484445085,1.53041946185451,0,0.639337125799041,0.329851300186716,0.598390972864896,1.27867425159808,3.77272010217159,0.56738522469114,0.622822248995575,0.502497330513487,1.5644487552606,2.17188844705117,10.2917915447673,5.15588690382591,10.1267963981083,0.845021145247767,0.425208599930087,0.838634582033504,0.786300418025466,0.600707571366025,2.89306056054744,0.285012743741249,0.39783335439818,0.91332076882317,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328875809207352,0,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.255725123687061,0,0,0.434539556882471,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0.993943903390637,0,0.397227542439656,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0.597794722207204,0,0,0.140450806702248,0,0.61417158655884,0.309977343527296,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0.30648779579902,0.600952235626387,0.226864366320042,0,0,0,0,0.206105058476878,0.772921620136887,0.18611685633159,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0.36497735907583,0,0,0,0.928735856063958,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0.219500570817251,0,0,0,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0,0.462985512576611,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0.845302752556,0.26593811658487,0,0,0,0,1.14382394926518,1.08524321078289,0,0,0.355391948742546,0,0.301439377059586,0,1.09970290300263,0,0,0,0,1.14861935834114,0,0.434343920002738,0.205476322550383,0,1.79336230389644,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0,0.831883446123229,0.535286966391485,0.630809660135739,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0.767309866440312,0.280660094433074,0.256278298511402,0,0.482561763430822,0,0.616838775210622,0,0,0,0,0,0,0,0.114814448164607,0.728364672026868,0.917870904715969,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,0,0.290012154876366,0,0.15350367472613,0.137836572484531,0.214840489736547,0.290033387828457,0.0852266274161009,0.534192213880424,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71175595213568,0,0,0.179872457583315,0.54907405947211,0,0,0,0,0,0.731140468893853,0,0,1.27264888758341,0,0,0,0,0,0.655894752046633,0,0,0,0.573645408816206,0.491245205065606,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.735120647943095,0,1.73123055571734,4.41079428760168,0.318852545457645,0.59873811429845,0,0.423347165447766,0,0.842391534340376,2.73881614839831,0,0,0,2.56940920165919,1.21079824314629,0.851692475380653,0.343505344755765,0.614481528616916,1.11838053946208,1.66849141711908,1.17232857241224,0,0,0,0,1.4098700508785,0,0.146508179271894,0,0,0,0,0,0,0,0,0.556543525114529,0,0.211125408127993,0.19924798825107,0.828851746593443,0,0,0.369254416383208,0.622079175323615,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,0,0.166211681900156,0,0,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0.796118080530053,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0,2.44980993535944,0,0.52418000472609,0,0,0,0,0.775912131907355,0,0.225980740780532,0,0.19871461170299,0,0,0,0.213452994739353,0.39961921916426,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0.136905378891993,0,0.429765441419957,0,1.39641200636127,5.04152932825704,0.717873024576814,0,0.858452096273142,0.89268582976749,0.201550417460179,1.08089965062721,0,0,0,0,0,18.0354197300121,0,0,0,0,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0,0,3.57347663186684,3.97255182219259,0.25426853765475,0,0,0,0,0.246277562248017,0,1.47305718976163,0.146552233678082,0,0,0,0,0,0.320362237703084,0.157204305099666,0.414239055347196,0.496166021811951,0,0.121792598380896,12.7668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0.251567901752575,0,0.686520205190771,0,0,0,0.159296767163702,0,0,0,0.265841714557995,0.521745061811734,0,1.14241563650639,0,0.363697318405119,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| ||
|short_description=p9@NEXN | |short_description=p9@NEXN | ||
}} | }} |
Latest revision as of 07:43, 19 September 2015
Short description: | p9@NEXN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NEXN_5end |
Coexpression cluster: | NA |
Association with transcript: | 221bp_to_ENST00000464998_5end |
EntrezGene: | NEXN |
HGNC: | 29557 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 1.10e-08 | 115 |
hematopoietic oligopotent progenitor cell | 1.15e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.15e-08 | 161 |
cortical cell of adrenal gland | 3.01e-08 | 2 |
hematopoietic lineage restricted progenitor cell | 3.96e-08 | 120 |
hematopoietic cell | 4.03e-08 | 177 |
hematopoietic stem cell | 4.63e-08 | 168 |
classical monocyte | 6.66e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.66e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.17e-08 | 39 |
hematologic cancer | 1.77e-07 | 51 |
immune system cancer | 1.77e-07 | 51 |