FFCP PHASE1:Hg19::chr1:235667548..235667557,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:235667548..235667557,-
|short_description=p4@B3GALNT2
|description=CAGE_peak_4_at_B3GALNT2_5end
|association_with_transcript=164bp_to_ENST00000313984_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=148789 | |EntrezGene=148789 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28596 | |HGNC=28596 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=164bp_to_ENST00000313984_5end | |||
|cluster_id=chr1:235667548..235667557,- | |||
|description=CAGE_peak_4_at_B3GALNT2_5end | |||
|id=chr1:235667548..235667557,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.31e-08;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.56e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3193;2.31e-08;2!DOID:962;2.31e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,2.87e-08,2;DOID:962,2.87e-08,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.73e-23;10!UBERON:0000478;5.72e-10;24!UBERON:0000178;2.67e-09;15!UBERON:0000179;2.67e-09;15!UBERON:0000463;2.67e-09;15!UBERON:0000922;1.09e-08;49!UBERON:0003714;2.31e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.78e-23,10;UBERON:0000358,1.78e-23,10;UBERON:0000307,1.78e-23,10;UBERON:0000091,1.78e-23,10;UBERON:0000087,1.78e-23,10;UBERON:0007010,1.78e-23,10;UBERON:0007806,1.78e-23,10;UBERON:0008780,1.78e-23,10;UBERON:0005728,1.78e-23,10;UBERON:0000478,5.79e-10,24;UBERON:0000178,2.71e-09,15;UBERON:0000179,2.71e-09,15;UBERON:0000463,2.71e-09,15;UBERON:0003714,2.87e-08,2 | |||
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| ||
|short_description=p4@B3GALNT2 | |||
}} | }} |
Latest revision as of 12:39, 16 September 2015
Short description: | p4@B3GALNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_B3GALNT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 164bp_to_ENST00000313984_5end |
EntrezGene: | B3GALNT2 |
HGNC: | 28596 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.78e-23 | 10 |
blastocyst | 1.78e-23 | 10 |
blastula | 1.78e-23 | 10 |
bilaminar disc | 1.78e-23 | 10 |
inner cell mass | 1.78e-23 | 10 |
cleaving embryo | 1.78e-23 | 10 |
connecting stalk | 1.78e-23 | 10 |
inner cell mass derived epiblast | 1.78e-23 | 10 |
extraembryonic mesoderm | 1.78e-23 | 10 |
extraembryonic structure | 5.79e-10 | 24 |
blood | 2.71e-09 | 15 |
haemolymphatic fluid | 2.71e-09 | 15 |
organism substance | 2.71e-09 | 15 |
neural tissue | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 2.87e-08 | 2 |
neurofibroma | 2.87e-08 | 2 |