FFCP PHASE1:Hg19::chr19:4012104..4012106,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:4012104..4012106,- | |||
|coexpression_cluster_id=C1707 | |coexpression_cluster_id=C1707 | ||
|description=CAGE_peak_at_chr19:4012104..4012106,- | |description=CAGE_peak_at_chr19:4012104..4012106,- | ||
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|ontology_enrichment_celltype=CL:0000738!8.44e-18!140;CL:0000037!9.44e-18!172;CL:0000566!9.44e-18!172;CL:0000988!1.04e-16!182;CL:0002032!3.25e-15!165;CL:0000837!3.25e-15!165;CL:0002087!3.29e-15!119;CL:0002031!7.65e-14!124;CL:0000860!1.15e-12!45;CL:0002057!1.33e-12!42;CL:0000766!3.61e-12!76;CL:0000763!8.00e-11!112;CL:0000049!8.00e-11!112;CL:0000839!3.37e-10!70;CL:0000557!4.90e-09!71;CL:0002194!5.51e-09!63;CL:0000576!5.51e-09!63;CL:0000040!5.51e-09!63;CL:0000559!5.51e-09!63;CL:0002009!1.57e-08!65;CL:0002393!2.73e-07!9;CL:0002397!2.73e-07!9;CL:0000623!6.78e-07!3;CL:0000825!6.78e-07!3;CL:0000842!7.74e-07!3 | |ontology_enrichment_celltype=CL:0000738!8.44e-18!140;CL:0000037!9.44e-18!172;CL:0000566!9.44e-18!172;CL:0000988!1.04e-16!182;CL:0002032!3.25e-15!165;CL:0000837!3.25e-15!165;CL:0002087!3.29e-15!119;CL:0002031!7.65e-14!124;CL:0000860!1.15e-12!45;CL:0002057!1.33e-12!42;CL:0000766!3.61e-12!76;CL:0000763!8.00e-11!112;CL:0000049!8.00e-11!112;CL:0000839!3.37e-10!70;CL:0000557!4.90e-09!71;CL:0002194!5.51e-09!63;CL:0000576!5.51e-09!63;CL:0000040!5.51e-09!63;CL:0000559!5.51e-09!63;CL:0002009!1.57e-08!65;CL:0002393!2.73e-07!9;CL:0002397!2.73e-07!9;CL:0000623!6.78e-07!3;CL:0000825!6.78e-07!3;CL:0000842!7.74e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.11e-22;18!CL:0000789;6.11e-22;18!CL:0002419;6.11e-22;18!CL:0002393;1.44e-17;6!CL:0002397;1.44e-17;6!CL:0000624;2.96e-17;6!CL:0000084;1.03e-15;25!CL:0000775;1.77e-15;3!CL:0000094;7.61e-13;8!CL:0000542;1.07e-11;53!CL:0000625;8.72e-10;11!CL:0000081;1.70e-09;11!CL:0000236;3.15e-08;13!CL:0000771;9.53e-07;2 | |ontology_enrichment_celltype_v019=CL:0000791;6.11e-22;18!CL:0000789;6.11e-22;18!CL:0002419;6.11e-22;18!CL:0002393;1.44e-17;6!CL:0002397;1.44e-17;6!CL:0000624;2.96e-17;6!CL:0000084;1.03e-15;25!CL:0000775;1.77e-15;3!CL:0000094;7.61e-13;8!CL:0000542;1.07e-11;53!CL:0000625;8.72e-10;11!CL:0000081;1.70e-09;11!CL:0000236;3.15e-08;13!CL:0000771;9.53e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.81e-22,18;CL:0000789,4.81e-22,18;CL:0002420,4.81e-22,18;CL:0002419,4.81e-22,18;CL:0000790,4.81e-22,18;CL:0000738,3.08e-21,136;CL:0000838,4.09e-20,52;CL:0000542,1.04e-19,53;CL:0000051,1.04e-19,53;CL:0002032,1.25e-17,161;CL:0000837,1.25e-17,161;CL:0000624,2.51e-17,6;CL:0002087,6.94e-17,115;CL:0000037,8.29e-17,168;CL:0002031,4.16e-16,120;CL:0000988,7.57e-16,177;CL:0000084,8.71e-16,25;CL:0000827,8.71e-16,25;CL:0000775,1.91e-15,3;CL:0000094,7.93e-13,8;CL:0002393,7.29e-12,9;CL:0002397,7.29e-12,9;CL:0000625,7.86e-10,11;CL:0000081,1.75e-09,11;CL:0000134,7.48e-08,354;CL:0000236,1.14e-07,14;CL:0002320,1.18e-07,361;CL:0000219,5.99e-07,386;CL:0000766,9.35e-07,72;CL:0000771,9.54e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;6.11e-22;18!CL:0000051;1.07e-11;53 | |ontology_enrichment_development_v019=CL:0000790;6.11e-22;18!CL:0000051;1.07e-11;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.81e-08!80;UBERON:0002390!9.88e-08!102;UBERON:0003061!9.88e-08!102;UBERON:0001474!3.88e-07!86 | |ontology_enrichment_uberon=UBERON:0002371!3.81e-08!80;UBERON:0002390!9.88e-08!102;UBERON:0003061!9.88e-08!102;UBERON:0001474!3.88e-07!86 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.22e-07,371 | |||
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| ||
|short_description=p@chr19:4012104..4012106,- | |short_description=p@chr19:4012104..4012106,- | ||
}} | }} |
Latest revision as of 07:42, 26 July 2015
Short description: | p@chr19:4012104..4012106, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:4012104..4012106, - |
Coexpression cluster: | C1707_CD14_CD4_CD8_Natural_CD19_Monocytederived_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.81e-22 | 18 |
alpha-beta T cell | 4.81e-22 | 18 |
immature T cell | 4.81e-22 | 18 |
mature T cell | 4.81e-22 | 18 |
immature alpha-beta T cell | 4.81e-22 | 18 |
leukocyte | 3.08e-21 | 136 |
lymphoid lineage restricted progenitor cell | 4.09e-20 | 52 |
lymphocyte | 1.04e-19 | 53 |
common lymphoid progenitor | 1.04e-19 | 53 |
hematopoietic oligopotent progenitor cell | 1.25e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.25e-17 | 161 |
CD4-positive, alpha-beta T cell | 2.51e-17 | 6 |
nongranular leukocyte | 6.94e-17 | 115 |
hematopoietic stem cell | 8.29e-17 | 168 |
hematopoietic lineage restricted progenitor cell | 4.16e-16 | 120 |
hematopoietic cell | 7.57e-16 | 177 |
T cell | 8.71e-16 | 25 |
pro-T cell | 8.71e-16 | 25 |
neutrophil | 1.91e-15 | 3 |
granulocyte | 7.93e-13 | 8 |
intermediate monocyte | 7.29e-12 | 9 |
CD14-positive, CD16-positive monocyte | 7.29e-12 | 9 |
CD8-positive, alpha-beta T cell | 7.86e-10 | 11 |
blood cell | 1.75e-09 | 11 |
mesenchymal cell | 7.48e-08 | 354 |
B cell | 1.14e-07 | 14 |
connective tissue cell | 1.18e-07 | 361 |
motile cell | 5.99e-07 | 386 |
myeloid leukocyte | 9.35e-07 | 72 |
eosinophil | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.22e-07 | 371 |