FFCP PHASE1:Hg19::chr1:234743479..234743494,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:234743479..234743494,-
|short_description=p5@IRF2BP2
|description=CAGE_peak_5_at_IRF2BP2_5end
|association_with_transcript=70bp_to_BC020516_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=359948 | |EntrezGene=359948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=21729 | |HGNC=21729 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z5L9 | |UniProt=Q7Z5L9 | ||
|association_with_transcript=70bp_to_BC020516_5end | |||
|cluster_id=chr1:234743479..234743494,- | |||
|description=CAGE_peak_5_at_IRF2BP2_5end | |||
|id=chr1:234743479..234743494,- | |||
|ontology_enrichment_celltype=CL:0002057!2.06e-16!42;CL:0000766!1.87e-15!76;CL:0000860!2.12e-15!45;CL:0000557!3.03e-12!71;CL:0000839!7.20e-12!70;CL:0000738!9.25e-12!140;CL:0002009!4.01e-11!65;CL:0002194!8.88e-11!63;CL:0000576!8.88e-11!63;CL:0000040!8.88e-11!63;CL:0000559!8.88e-11!63;CL:0000763!2.66e-10!112;CL:0000049!2.66e-10!112;CL:0000988!1.07e-09!182;CL:0000037!1.20e-09!172;CL:0000566!1.20e-09!172;CL:0002031!7.34e-09!124;CL:0002032!1.69e-08!165;CL:0000837!1.69e-08!165;CL:0002087!4.69e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.42e-15;33!CL:0002057;4.42e-15;33!CL:0000473;7.76e-12;39!CL:0000234;7.76e-12;39!CL:0000576;2.31e-10;48!CL:0000766;9.86e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.74e-18,72;CL:0000860,2.27e-17,42;CL:0002057,2.27e-17,42;CL:0000473,5.19e-16,48;CL:0000234,5.19e-16,48;CL:0000557,1.89e-14,67;CL:0000839,5.03e-14,66;CL:0002009,5.39e-13,61;CL:0000738,5.61e-13,136;CL:0002194,1.27e-12,59;CL:0000576,1.27e-12,59;CL:0000040,1.27e-12,59;CL:0000559,1.27e-12,59;CL:0000763,6.36e-12,108;CL:0000049,6.36e-12,108;CL:0000988,2.46e-11,177;CL:0000037,5.83e-11,168;CL:0002031,2.78e-10,120;CL:0002032,8.39e-10,161;CL:0000837,8.39e-10,161;CL:0002087,4.21e-09,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.95e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.34e-11!80;UBERON:0001474!2.04e-09!86;UBERON:0002390!2.57e-09!102;UBERON:0003061!2.57e-09!102;UBERON:0002193!6.01e-08!112;UBERON:0004765!1.44e-07!101;UBERON:0001434!1.44e-07!101;UBERON:0002405!5.65e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.88e-13,76;UBERON:0001474,5.71e-11,82;UBERON:0004765,7.81e-11,90;UBERON:0002390,3.64e-10,98;UBERON:0003061,3.64e-10,98;UBERON:0001434,3.90e-09,100;UBERON:0002193,8.41e-09,108;UBERON:0002405,1.22e-08,93 | |||
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| ||
|short_description=p5@IRF2BP2 | |||
}} | }} |
Latest revision as of 10:24, 16 September 2015
Short description: | p5@IRF2BP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_IRF2BP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 70bp_to_BC020516_5end |
EntrezGene: | IRF2BP2 |
HGNC: | 21729 |
UniProt: | Q7Z5L9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.74e-18 | 72 |
classical monocyte | 2.27e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.27e-17 | 42 |
defensive cell | 5.19e-16 | 48 |
phagocyte | 5.19e-16 | 48 |
granulocyte monocyte progenitor cell | 1.89e-14 | 67 |
myeloid lineage restricted progenitor cell | 5.03e-14 | 66 |
macrophage dendritic cell progenitor | 5.39e-13 | 61 |
leukocyte | 5.61e-13 | 136 |
monopoietic cell | 1.27e-12 | 59 |
monocyte | 1.27e-12 | 59 |
monoblast | 1.27e-12 | 59 |
promonocyte | 1.27e-12 | 59 |
myeloid cell | 6.36e-12 | 108 |
common myeloid progenitor | 6.36e-12 | 108 |
hematopoietic cell | 2.46e-11 | 177 |
hematopoietic stem cell | 5.83e-11 | 168 |
hematopoietic lineage restricted progenitor cell | 2.78e-10 | 120 |
hematopoietic oligopotent progenitor cell | 8.39e-10 | 161 |
hematopoietic multipotent progenitor cell | 8.39e-10 | 161 |
nongranular leukocyte | 4.21e-09 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.88e-13 | 76 |
bone element | 5.71e-11 | 82 |
skeletal element | 7.81e-11 | 90 |
hematopoietic system | 3.64e-10 | 98 |
blood island | 3.64e-10 | 98 |
skeletal system | 3.90e-09 | 100 |
hemolymphoid system | 8.41e-09 | 108 |
immune system | 1.22e-08 | 93 |