FFCP PHASE1:Hg19::chr17:2206619..2206647,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23293 | |EntrezGene=23293 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17809 | |HGNC=17809 | ||
|TSSclassifier=strong | |||
|UniProt=Q86US8,Q9H7Y8 | |UniProt=Q86US8,Q9H7Y8 | ||
|association_with_transcript=165bp_to_ENST00000544865,NM_001170957,uc002fud.1_5end | |association_with_transcript=165bp_to_ENST00000544865,NM_001170957,uc002fud.1_5end | ||
|cluster_id=chr17:2206619..2206647,- | |||
|description=CAGE_peak_4_at_SMG6_5end | |description=CAGE_peak_4_at_SMG6_5end | ||
|id=chr17:2206619..2206647,- | |id=chr17:2206619..2206647,- | ||
|ontology_enrichment_celltype=CL:0000057!4.37e-08!75;CL:0000055!5.24e-08!180;CL:0000220!1.10e-07!246;CL:0002321!1.92e-07!248 | |ontology_enrichment_celltype=CL:0000057!4.37e-08!75;CL:0000055!5.24e-08!180;CL:0000220!1.10e-07!246;CL:0002321!1.92e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000154;4.30e-11;6!CL:0000150;2.15e-09;9!CL:0000622;3.46e-09;5!CL:0000077;6.71e-08;19 | |ontology_enrichment_celltype_v019=CL:0000154;4.30e-11;6!CL:0000150;2.15e-09;9!CL:0000622;3.46e-09;5!CL:0000077;6.71e-08;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000154,3.06e-11,6;CL:0000150,9.47e-10,9;CL:0000622,2.52e-09,5;CL:0000077,5.78e-08,19 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.94e-12!365;UBERON:0000467!2.65e-12!625;UBERON:0000480!4.33e-12!626;UBERON:0000468!8.43e-12!659;UBERON:0004573!5.07e-09!33;UBERON:0004571!5.07e-09!33;UBERON:0001637!1.15e-08!42;UBERON:0003509!1.15e-08!42;UBERON:0004572!1.15e-08!42;UBERON:0000119!1.89e-07!312;UBERON:0004872!1.96e-07!84;UBERON:0000481!2.45e-07!347;UBERON:0000483!2.50e-07!309;UBERON:0001981!4.11e-07!60;UBERON:0007500!4.11e-07!60;UBERON:0004537!4.11e-07!60;UBERON:0006965!4.11e-07!60;UBERON:0000055!5.12e-07!69;UBERON:0003102!6.45e-07!95;UBERON:0002049!8.84e-07!79;UBERON:0007798!8.84e-07!79 | |ontology_enrichment_uberon=UBERON:0000475!1.94e-12!365;UBERON:0000467!2.65e-12!625;UBERON:0000480!4.33e-12!626;UBERON:0000468!8.43e-12!659;UBERON:0004573!5.07e-09!33;UBERON:0004571!5.07e-09!33;UBERON:0001637!1.15e-08!42;UBERON:0003509!1.15e-08!42;UBERON:0004572!1.15e-08!42;UBERON:0000119!1.89e-07!312;UBERON:0004872!1.96e-07!84;UBERON:0000481!2.45e-07!347;UBERON:0000483!2.50e-07!309;UBERON:0001981!4.11e-07!60;UBERON:0007500!4.11e-07!60;UBERON:0004537!4.11e-07!60;UBERON:0006965!4.11e-07!60;UBERON:0000055!5.12e-07!69;UBERON:0003102!6.45e-07!95;UBERON:0002049!8.84e-07!79;UBERON:0007798!8.84e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.44e-07;6!UBERON:0003293;1.44e-07;6!UBERON:0003294;1.44e-07;6!UBERON:0010047;1.44e-07;6!UBERON:0003408;1.44e-07;6!UBERON:0000167;1.44e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0001044;1.44e-07;6!UBERON:0003293;1.44e-07;6!UBERON:0003294;1.44e-07;6!UBERON:0010047;1.44e-07;6!UBERON:0003408;1.44e-07;6!UBERON:0000167;1.44e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,7.49e-09,99;UBERON:0001044,4.39e-08,6;UBERON:0003293,4.39e-08,6;UBERON:0003294,4.39e-08,6;UBERON:0010047,4.39e-08,6;UBERON:0000167,4.39e-08,6 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.563817616383885,0,0.446961094427288,1.74467704820074,0,1.26343974685366,0.261185628199839,0,0,1.09220686065086,1.58260186937072,0.123766352960047,1.32558950291166,0,0.602694528023977,0.730310090387373,0.975865597581014,0.738726348460727,0.408001382488506,0,0.286235987131057,0,0.502170558379211,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0.223915474239924,0,0,0.436194716338694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0.383587685530591,0.361439152384566,1.00267582127178,0.434539556882471,0.795285947051099,0.486634870302636,0.283604451492204,0.443458794925128,0.527008714158756,0.851363990735132,0,0.741568885568859,0.97364218096405,0.870648686496336,0.26591592103773,0,0,0,0.198762407366705,0.860234595106124,0,0,1.67799774483962,0.550236083880135,0.417989933073621,0,1.06729878806013,1.00416183829401,0.402829317109147,0,0,1.10298924103761,0.81014194788176,0.0892997282840798,0.22452937262617,0.225222960966644,3.06633274931766,0,0.549605231791222,0,0,1.74437620857014,0.496971951695318,0.506522046658319,2.38336525463794,0.860509862246441,0.709336764396714,0,1.06748995729705,0.74000264525148,1.24484414159907,0.269421344139376,0.817309515567294,0.908144565869588,0,0.234321431833797,0.624320153660641,0,0.298897361103602,0,0,0,1.02077085627447,0.245668634623536,0.309977343527296,0,0.741800787835671,1.82032272387605,0.718618141816238,0.505008341862199,0,1.10825646193673,0.438977620880838,0.30648779579902,0.600952235626387,0.226864366320042,1.61450672119976,0,0.847727604638247,1.50045548042201,0.515262646192195,1.8034837803194,1.11670113798954,1.35021065793013,0.68205903612839,1.26216887122057,0.644349290496095,1.45481451136931,3.19508633264953,0.906768884048762,0.169560592310488,1.35282597214308,1.09098448236334,1.72082757233402,0,0.132529768321485,0,0.207322110030741,0,0,1.56449532329816,0.643240938192885,0,1.39310378409594,0.721879481669586,0.118306800039844,0.337169380156203,0.241011029883482,0.330881918197182,0,0,0.404493924480493,0,0,0,0,0,1.47008711385542,1.26755034821831,0,0,0,0.122988438543114,0.686271241194102,0.98775256867763,0,0.402115889646523,0.555530670951178,0,2.07986957055916,1.44331342025273,0.231860809950154,0.587043471179108,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0,0.148631162288728,1.87467667973554,1.00789276919316,0.567100388969546,1.52249488594842,0.581267877027924,1.53353071666084,0,0.088048434013226,0.414656231081544,0.576479813667846,0.88369703398466,0,0.763976851116555,0,0,0.308482478109971,0,0,0.448524337381443,0.43596006883328,0.07333828582095,1.16344544182,0,0.845302752556,0.531876233169741,0,0,0,0.266422179016099,0,0.542621605391443,0.823240336780769,0,0.355391948742546,0,2.71295439353627,1.74306691720059,1.59956785891291,0,0,0,0.479249710983165,0,0,0.434343920002738,0.410952645100767,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.415941723061614,1.07057393278297,0.788512075169673,0.585707074963566,0.601892199455438,0,0,0,0,0.955719759148911,0.391602314925481,0,0.206768026122887,0.215714200818617,0.106727557803444,0.909382714338778,0,0.907170879989041,2.23297027036899,0.61384789315225,0.841980283299221,0.768834895534206,1.02341449813341,0.965123526861645,0,0.154209693802656,0.887808626565635,0.657017248110473,0,0.232420756919918,0,1.60405176242628,0.368323955743585,0.68888668898764,0.546273504020151,1.04899531967539,0.902399225814824,0.308061348417659,0,1.46139224653261,0.316654886678627,1.13733384070897,0.680374821106063,0.215915916102139,0,0.541892875087706,0,0.509752546090077,0,0.223874754722178,0,0,0.769350375349168,0.328014645699706,0,0.309123034943167,0,0,1.14853107599234,1.30012049207304,3.21367859688319,0.193341436584244,0.154048617114644,0.15350367472613,0,0.322260734604821,0.725083469571143,0.426133137080504,0.712256285173899,1.4875642382488,1.34533047155574,3.1903178123646,1.0115778085555,0.464845549297286,1.88887408098384,1.3940745403212,1.54016790088044,0.532306030317022,0.869932992075073,1.29726953372744,1.14499909393593,0,0,0.38126038784765,1.02359116524534,0,1.27281299170375,0.78494864019923,0.179872457583315,0,0.353437207037059,0.808729926293264,1.58510321173008,1.26377536871694,0.975267478179181,0.974853958525138,1.05650146756755,0.272999822815972,0.424216295861138,0,0.551365343546124,1.32687795048244,0.438450885253763,1.15755106853338,0,1.01455188481352,0.30982349809975,0,0.143411352204052,0,0.35667105148125,0,0.844430541190656,1.64647446479951,0,0.349934720244983,0.769776901804097,0,1.08890984861323,0.564862804660675,1.72202149068492,0,0.886860307073351,0.918893600827838,0,0,0,0,0,0.648473311192717,0,0,0.320472213382419,0,0.490080431962063,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0.5568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| ||
|short_description=p4@SMG6 | |short_description=p4@SMG6 | ||
}} | }} |
Latest revision as of 02:53, 19 September 2015
Short description: | p4@SMG6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SMG6_5end |
Coexpression cluster: | NA |
Association with transcript: | 165bp_to_ENST00000544865, NM_001170957, uc002fud.1_5end |
EntrezGene: | SMG6 |
HGNC: | 17809 |
UniProt: | Q86US8Q9H7Y8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
protein secreting cell | 3.06e-11 | 6 |
glandular epithelial cell | 9.47e-10 | 9 |
acinar cell | 2.52e-09 | 5 |
mesothelial cell | 5.78e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
surface structure | 7.49e-09 | 99 |
saliva-secreting gland | 4.39e-08 | 6 |
gland of oral region | 4.39e-08 | 6 |
gland of foregut | 4.39e-08 | 6 |
oral gland | 4.39e-08 | 6 |
oral cavity | 4.39e-08 | 6 |