FFCP PHASE1:Hg19::chr12:47226206..47226232,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55089 | |EntrezGene=55089 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14679 | |HGNC=14679 | ||
|TSSclassifier=strong | |||
|UniProt=F8VRD9 | |UniProt=F8VRD9 | ||
|association_with_transcript=-15bp_to_ENST00000546940_5end | |association_with_transcript=-15bp_to_ENST00000546940_5end | ||
|cluster_id=chr12:47226206..47226232,- | |||
|description=CAGE_peak_5_at_SLC38A4_5end | |description=CAGE_peak_5_at_SLC38A4_5end | ||
|id=chr12:47226206..47226232,- | |id=chr12:47226206..47226232,- | ||
|ontology_enrichment_celltype=CL:0002322!6.57e-13!5 | |ontology_enrichment_celltype=CL:0002322!6.57e-13!5 | ||
|ontology_enrichment_celltype_v019=CL:0002563;2.21e-12;4!CL:0000182;1.34e-09;12!CL:0002253;5.13e-07;2 | |ontology_enrichment_celltype_v019=CL:0002563;2.21e-12;4!CL:0000182;1.34e-09;12!CL:0002253;5.13e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.97e-12,4;CL:0000182,1.34e-09,12;CL:0002253,4.69e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.04e-08;31 | |ontology_enrichment_development_v019=UBERON:0003104;1.04e-08;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.01e-15;19!UBERON:0006925;1.01e-15;19!UBERON:0002426;6.06e-13;1!UBERON:0003831;6.06e-13;1!UBERON:0003898;6.06e-13;1!UBERON:0004830;6.06e-13;1!UBERON:0003830;6.06e-13;1!UBERON:0005175;6.06e-13;1!UBERON:0001774;6.06e-13;1!UBERON:0001103;6.06e-13;1!UBERON:0001242;2.21e-12;4!UBERON:0001262;2.21e-12;4!UBERON:0004786;2.21e-12;4!UBERON:0004808;2.21e-12;4!UBERON:0001277;2.21e-12;4!UBERON:0002423;6.19e-12;25!UBERON:0002365;1.34e-09;31!UBERON:0002330;1.34e-09;31!UBERON:0002368;2.35e-08;33!UBERON:0001007;9.83e-08;81!UBERON:0000485;1.86e-07;7!UBERON:0003929;1.86e-07;7!UBERON:0005090;4.17e-07;2!UBERON:0001630;4.17e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002107;1.01e-15;19!UBERON:0006925;1.01e-15;19!UBERON:0002426;6.06e-13;1!UBERON:0003831;6.06e-13;1!UBERON:0003898;6.06e-13;1!UBERON:0004830;6.06e-13;1!UBERON:0003830;6.06e-13;1!UBERON:0005175;6.06e-13;1!UBERON:0001774;6.06e-13;1!UBERON:0001103;6.06e-13;1!UBERON:0001242;2.21e-12;4!UBERON:0001262;2.21e-12;4!UBERON:0004786;2.21e-12;4!UBERON:0004808;2.21e-12;4!UBERON:0001277;2.21e-12;4!UBERON:0002423;6.19e-12;25!UBERON:0002365;1.34e-09;31!UBERON:0002330;1.34e-09;31!UBERON:0002368;2.35e-08;33!UBERON:0001007;9.83e-08;81!UBERON:0000485;1.86e-07;7!UBERON:0003929;1.86e-07;7!UBERON:0005090;4.17e-07;2!UBERON:0001630;4.17e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.01e-15,19;UBERON:0006925,1.01e-15,19;UBERON:0008836,1.01e-15,19;UBERON:0008835,1.43e-13,22;UBERON:0003894,1.43e-13,22;UBERON:0009854,5.60e-13,23;UBERON:0002426,6.06e-13,1;UBERON:0003831,6.06e-13,1;UBERON:0003898,6.06e-13,1;UBERON:0004830,6.06e-13,1;UBERON:0003830,6.06e-13,1;UBERON:0005175,6.06e-13,1;UBERON:0001774,6.06e-13,1;UBERON:0001103,6.06e-13,1;UBERON:0010084,6.06e-13,1;UBERON:0001242,1.97e-12,4;UBERON:0001262,1.97e-12,4;UBERON:0004786,1.97e-12,4;UBERON:0004808,1.97e-12,4;UBERON:0001277,1.97e-12,4;UBERON:0007499,6.19e-12,25;UBERON:0009497,6.19e-12,25;UBERON:0000015,6.19e-12,25;UBERON:0002423,6.19e-12,25;UBERON:0006235,6.19e-12,25;UBERON:0004161,6.19e-12,25;UBERON:0009856,1.79e-11,26;UBERON:0003929,3.99e-10,54;UBERON:0002365,1.32e-09,31;UBERON:0002330,1.32e-09,31;UBERON:0002368,1.70e-08,35;UBERON:0005911,2.31e-08,82;UBERON:0005172,1.40e-07,54;UBERON:0005173,1.40e-07,54;UBERON:0005090,4.17e-07,2;UBERON:0001630,4.17e-07,2;UBERON:0004921,5.87e-07,118;UBERON:0002417,8.81e-07,60;UBERON:0000916,8.81e-07,60 | |||
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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.132529768321485,0.348581828608555,0.518305275076852,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,18.6737171168749,23.0408063605748,0,1.47586126251736,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,2.57602529119306,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,3.29503302718727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,1.97894300007517,0,0,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,7.55017990592644,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0.643012593860077,1.10031549277787,0.83088067605837,0,0,0,0,0.157611414598396,0.524545881349981,0,0,0,0.714695326373367,0,2.034148301238,0,0,0,0,0,0,0.453248366080503,8.79313402068495,15.9008266694666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,21.47006693027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02662806856247,0,0.485710993059139,0,0,4.63788354032517,0,0,0,0,0,0,0.735444965261716,0,0,0,0.4226557275834,0,0.187967835959707,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0.714193294391221,0,0.496597714366863,0,0.12729431655633,0.606351566874658,0,7.87136592496146,0.0673520530145875,0.0717222053926763,0.665320713092027,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p5@SLC38A4 | |short_description=p5@SLC38A4 | ||
}} | }} |
Latest revision as of 12:00, 18 September 2015
Short description: | p5@SLC38A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC38A4_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000546940_5end |
EntrezGene: | SLC38A4 |
HGNC: | 14679 |
UniProt: | F8VRD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.97e-12 | 4 |
hepatocyte | 1.34e-09 | 12 |
epithelial cell of large intestine | 4.69e-07 | 2 |