FFCP PHASE1:Hg19::chr3:58477616..58477641,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200845 | |EntrezGene=200845 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22235 | |HGNC=22235 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NC69 | |UniProt=Q8NC69 | ||
|association_with_transcript=-181bp_to_NM_001128214,uc003dki.3,uc003dkj.3_5end | |association_with_transcript=-181bp_to_NM_001128214,uc003dki.3,uc003dkj.3_5end | ||
|cluster_id=chr3:58477616..58477641,+ | |||
|coexpression_cluster_id=C54 | |coexpression_cluster_id=C54 | ||
|description=CAGE_peak_2_at_KCTD6_5end | |description=CAGE_peak_2_at_KCTD6_5end | ||
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|ontology_enrichment_celltype=CL:0002194!3.02e-10!63;CL:0000576!3.02e-10!63;CL:0000040!3.02e-10!63;CL:0000559!3.02e-10!63;CL:0000839!1.72e-09!70;CL:0002009!2.31e-09!65;CL:0002057!7.59e-09!42;CL:0000557!1.29e-08!71;CL:0000860!2.12e-08!45;CL:0000766!1.71e-07!76;CL:0000047!5.91e-07!8 | |ontology_enrichment_celltype=CL:0002194!3.02e-10!63;CL:0000576!3.02e-10!63;CL:0000040!3.02e-10!63;CL:0000559!3.02e-10!63;CL:0000839!1.72e-09!70;CL:0002009!2.31e-09!65;CL:0002057!7.59e-09!42;CL:0000557!1.29e-08!71;CL:0000860!2.12e-08!45;CL:0000766!1.71e-07!76;CL:0000047!5.91e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000540;4.59e-14;6!CL:0000404;4.59e-14;6!CL:0000473;2.21e-09;39!CL:0000234;2.21e-09;39!CL:0000860;9.45e-09;33!CL:0002057;9.45e-09;33!CL:0000047;7.13e-08;2!CL:0000576;4.53e-07;48 | |ontology_enrichment_celltype_v019=CL:0000540;4.59e-14;6!CL:0000404;4.59e-14;6!CL:0000473;2.21e-09;39!CL:0000234;2.21e-09;39!CL:0000860;9.45e-09;33!CL:0002057;9.45e-09;33!CL:0000047;7.13e-08;2!CL:0000576;4.53e-07;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.55e-20,8;CL:0000540,3.70e-14,6;CL:0000031,3.70e-14,6;CL:0000404,3.70e-14,6;CL:0002194,1.09e-13,59;CL:0000576,1.09e-13,59;CL:0000040,1.09e-13,59;CL:0000559,1.09e-13,59;CL:0002009,4.20e-13,61;CL:0000839,8.51e-12,66;CL:0000557,1.47e-11,67;CL:0000766,1.80e-10,72;CL:0000473,2.86e-10,48;CL:0000234,2.86e-10,48;CL:0000860,6.59e-09,42;CL:0002057,6.59e-09,42 | |||
|ontology_enrichment_development_v019=CL:0000031;4.59e-14;6!CL:0002057;2.01e-07;42 | |ontology_enrichment_development_v019=CL:0000031;4.59e-14;6!CL:0002057;2.01e-07;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.80e-13!82;UBERON:0005743!6.04e-13!86;UBERON:0000073!5.70e-12!94;UBERON:0001016!5.70e-12!94;UBERON:0000468!8.08e-10!659;UBERON:0000922!3.78e-09!612;UBERON:0002616!1.33e-08!59;UBERON:0000480!1.71e-08!626;UBERON:0001049!1.85e-08!57;UBERON:0005068!1.85e-08!57;UBERON:0006241!1.85e-08!57;UBERON:0007135!1.85e-08!57;UBERON:0000467!2.08e-08!625;UBERON:0000955!2.52e-08!69;UBERON:0006238!2.52e-08!69;UBERON:0000062!3.87e-08!511;UBERON:0002371!5.21e-08!80;UBERON:0002050!5.56e-08!605;UBERON:0005423!5.56e-08!605;UBERON:0003075!8.36e-08!86;UBERON:0007284!8.36e-08!86;UBERON:0000923!1.09e-07!604;UBERON:0005291!1.09e-07!604;UBERON:0006598!1.09e-07!604;UBERON:0002532!1.09e-07!604;UBERON:0002020!1.74e-07!34;UBERON:0003528!1.74e-07!34;UBERON:0002346!3.63e-07!90;UBERON:0002390!7.21e-07!102;UBERON:0003061!7.21e-07!102;UBERON:0001893!7.35e-07!34;UBERON:0001474!7.56e-07!86;UBERON:0002193!9.24e-07!112;UBERON:0001869!9.97e-07!32 | |ontology_enrichment_uberon=UBERON:0001017!2.80e-13!82;UBERON:0005743!6.04e-13!86;UBERON:0000073!5.70e-12!94;UBERON:0001016!5.70e-12!94;UBERON:0000468!8.08e-10!659;UBERON:0000922!3.78e-09!612;UBERON:0002616!1.33e-08!59;UBERON:0000480!1.71e-08!626;UBERON:0001049!1.85e-08!57;UBERON:0005068!1.85e-08!57;UBERON:0006241!1.85e-08!57;UBERON:0007135!1.85e-08!57;UBERON:0000467!2.08e-08!625;UBERON:0000955!2.52e-08!69;UBERON:0006238!2.52e-08!69;UBERON:0000062!3.87e-08!511;UBERON:0002371!5.21e-08!80;UBERON:0002050!5.56e-08!605;UBERON:0005423!5.56e-08!605;UBERON:0003075!8.36e-08!86;UBERON:0007284!8.36e-08!86;UBERON:0000923!1.09e-07!604;UBERON:0005291!1.09e-07!604;UBERON:0006598!1.09e-07!604;UBERON:0002532!1.09e-07!604;UBERON:0002020!1.74e-07!34;UBERON:0003528!1.74e-07!34;UBERON:0002346!3.63e-07!90;UBERON:0002390!7.21e-07!102;UBERON:0003061!7.21e-07!102;UBERON:0001893!7.35e-07!34;UBERON:0001474!7.56e-07!86;UBERON:0002193!9.24e-07!112;UBERON:0001869!9.97e-07!32 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,7.33e-10,82;UBERON:0004765,9.23e-10,90;UBERON:0002371,1.05e-09,76;UBERON:0002390,1.56e-08,98;UBERON:0003061,1.56e-08,98;UBERON:0001017,2.22e-08,81;UBERON:0001434,2.48e-08,100;UBERON:0002193,2.47e-07,108;UBERON:0002405,3.31e-07,93;UBERON:0001016,3.59e-07,89 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0.369363174230364,0.408001382488506,0.313454721478088,0.572471974262113,0.684372125364421,0.251085279189606,0.0764134057479513,0.164201178899891,0,0,0,0.619264493264304,0,0,0,0.232401601740905,0,0,0.553995408531877,0.200544447470142,0,1.34349284543955,0.647787332037959,0.515151135268373,3.19876125315042,2.64513160582167,1.94067248950253,0.929716147622738,1.23350366406548,0.929119112685311,0,0.768482119587302,0.709446689665756,0.689491361473237,0,2.70852973188684,1.12945403725563,0.818718450173537,0,0,0,1.27867425159808,1.64925650093358,0.398927315243264,0.426224750532694,0.290209238628584,0,0,0.75374599577023,1.5644487552606,0.868755378820466,1.81619850790011,0,1.58231193720442,1.26753171787165,0.212604299965044,0.628975936525128,0.786300418025466,0.300353785683013,0.32145117339416,0.570025487482497,0.39783335439818,0.547992461293902,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0.473554504088034,0,0,0,0,0,0.670700859703636,0.383587685530591,0.722878304769133,0.50133791063589,0,0,0,0.661743720148475,0.665188192387692,0.790513071238134,0.392937226493138,0,0,13.306443139842,17.9353629418245,6.64789802594326,0.238490624305342,0,0,0,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0,0.258416759169329,0.71153252537342,0,0,0,0,0,0.81014194788176,0,0.44905874525234,0.112611480483322,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0,0,0.560677600142307,0,0.49333509683432,0.311211035399766,0.269421344139376,0.326923806226917,1.05950199351452,0,0.234321431833797,0,0.570471821544449,0,0,0,0.421352420106746,0.204154171254893,0.245668634623536,0.309977343527296,0,1.23633464639278,0,0,0.168336113954066,0,0.277064115484183,0.438977620880838,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0.423863802319124,0.600182192168805,0.206105058476878,0.257640540045629,0,0.675105328965065,0.292311015483596,0.252433774244115,0.460249493211497,0,0,0,0,0,0,0.286804595389004,0.243947412259191,0.662648841607426,0.69716365721711,1.0366105501537,0.504641701751257,0.72995471815166,0,0.643240938192885,0,0.464367928031979,0,0.354920400119532,0.505754070234305,0.964044119533928,0.330881918197182,0.217879444092406,0.71181185733329,0.134831308160164,0,0.769494313892781,0,0,0.8231480226628,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,1.507095264676,0.117408694235822,0.288732895522148,0.462985512576611,0,0,0,0.738651018262192,0.936017060556951,1.0404181360211,0.93733833986777,0,0,0,0,0,0,0,0.621984346622316,0.144119953416961,0.37872730027914,0.126995788584338,0,0,0,0,0,0,0.560655421726804,0,0,0.129271715757778,0,0,0,0,0.514414748524284,0,0.266422179016099,0.285955987316295,0,0.823240336780769,0.325736184293735,0,0,0.602878754119172,1.74306691720059,0.299918973546171,1.2162378064119,0,0,0.239624855491583,0,1.42636905040718,0.289562613335158,0,0.179060963239896,0,0,0,0,4.06551398755941,1.30139853857622,1.54657762555539,1.34013012267479,3.82763250991898,0,0,0,0.736148950314839,2.00068208423871,0,0,0.178428988797162,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0.664225598535437,0.553107505625109,0.0868836144680828,0.783204629850962,0.686286847621712,0,0.215714200818617,0.106727557803444,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0,0.511707249066704,0.321707842287215,0,0.462629081407967,0,0.164254312027618,0,0.581051892299796,0.241718899183244,0,0.0920809889358963,0.229628896329213,0,0.262248829918848,0.451199612907412,0.231046011313244,0,0,0,0,0,0,0,0,0,0.764628819135115,0,0.223874754722178,0,0.261435451024901,0.256450125116389,0,0,0.412164046590889,0,0,0,0,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0.107420244868274,0.435050081742686,0,0.267096106940212,0,0,0,0,0.464845549297286,0,0,0.616067160352178,0.532306030317022,0,0.18532421910392,0.286249773483982,0.744316738719335,0.632758849437452,1.14378116354295,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0.235624804691373,0.202182481573316,0,0.421258456238981,0.48763373908959,0.731140468893853,1.05650146756755,0.272999822815972,0.707027159768564,0,0,0.66343897524122,0,0.578775534266688,0,0.202910376962704,0,0,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,1.52234282769651,0,0,0.476463550915578,0,0.648473311192717,0.540031437238115,0,2.02965735142199,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0.222886768554957,0,0.95497793895076,0,0.921482106297696,0.994147647766298,0.844016498463076,0,0.824019371133798,1.47787785689595,0,0,1.0077309914171,0.102268682502155,0.369254416383208,0.933118762985422,0,0.179021174675609,0,0,0,0,1.93866549219044,0.278304294485554,0,0.520855522170466,0.174919999992391,0.7249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| ||
|short_description=p2@KCTD6 | |short_description=p2@KCTD6 | ||
}} | }} |
Latest revision as of 05:39, 19 September 2015
Short description: | p2@KCTD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KCTD6_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | -181bp_to_NM_001128214, uc003dki.3, uc003dkj.3_5end |
EntrezGene: | KCTD6 |
HGNC: | 22235 |
UniProt: | Q8NC69 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.55e-20 | 8 |
neuron | 3.70e-14 | 6 |
neuroblast | 3.70e-14 | 6 |
electrically signaling cell | 3.70e-14 | 6 |
monopoietic cell | 1.09e-13 | 59 |
monocyte | 1.09e-13 | 59 |
monoblast | 1.09e-13 | 59 |
promonocyte | 1.09e-13 | 59 |
macrophage dendritic cell progenitor | 4.20e-13 | 61 |
myeloid lineage restricted progenitor cell | 8.51e-12 | 66 |
granulocyte monocyte progenitor cell | 1.47e-11 | 67 |
myeloid leukocyte | 1.80e-10 | 72 |
defensive cell | 2.86e-10 | 48 |
phagocyte | 2.86e-10 | 48 |
classical monocyte | 6.59e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.59e-09 | 42 |
Ontology term | p-value | n |
---|---|---|
bone element | 7.33e-10 | 82 |
skeletal element | 9.23e-10 | 90 |
bone marrow | 1.05e-09 | 76 |
hematopoietic system | 1.56e-08 | 98 |
blood island | 1.56e-08 | 98 |
central nervous system | 2.22e-08 | 81 |
skeletal system | 2.48e-08 | 100 |
hemolymphoid system | 2.47e-07 | 108 |
immune system | 3.31e-07 | 93 |
nervous system | 3.59e-07 | 89 |