FFCP PHASE1:Hg19::chr12:7060615..7060624,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5777 | |EntrezGene=5777 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9658 | |HGNC=9658 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000539365_5end | |association_with_transcript=11bp_to_ENST00000539365_5end | ||
|cluster_id=chr12:7060615..7060624,+ | |||
|coexpression_cluster_id=C2236 | |coexpression_cluster_id=C2236 | ||
|description=CAGE_peak_8_at_PTPN6_5end | |description=CAGE_peak_8_at_PTPN6_5end | ||
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|ontology_enrichment_celltype=CL:0000738!5.17e-85!140;CL:0000037!2.52e-84!172;CL:0000566!2.52e-84!172;CL:0002032!5.11e-80!165;CL:0000837!5.11e-80!165;CL:0000988!8.97e-78!182;CL:0002031!5.72e-73!124;CL:0002087!2.33e-70!119;CL:0000766!2.77e-56!76;CL:0000763!6.89e-52!112;CL:0000049!6.89e-52!112;CL:0000557!2.61e-49!71;CL:0000839!3.71e-46!70;CL:0002009!2.19e-44!65;CL:0002057!8.30e-43!42;CL:0002194!3.31e-42!63;CL:0000576!3.31e-42!63;CL:0000040!3.31e-42!63;CL:0000559!3.31e-42!63;CL:0000860!5.31e-39!45;CL:0000134!1.74e-23!358;CL:0000542!3.18e-23!53;CL:0000051!3.18e-23!53;CL:0000838!2.09e-22!52;CL:0002320!2.10e-22!365;CL:0000219!1.27e-18!390;CL:0000945!5.73e-18!24;CL:0000826!5.73e-18!24;CL:0000048!3.46e-14!430;CL:0000034!6.58e-14!444;CL:0002393!1.37e-13!9;CL:0002397!1.37e-13!9;CL:0000723!1.44e-13!436;CL:0000236!6.84e-13!14;CL:0000094!3.05e-09!8;CL:0000084!1.19e-07!25;CL:0000827!1.19e-07!25;CL:0000840!1.44e-07!5;CL:0001029!1.44e-07!5;CL:0002274!2.04e-07!5;CL:0000457!2.04e-07!5;CL:0002191!2.04e-07!5;CL:0000097!2.04e-07!5;CL:0000831!2.04e-07!5;CL:0002028!2.04e-07!5 | |ontology_enrichment_celltype=CL:0000738!5.17e-85!140;CL:0000037!2.52e-84!172;CL:0000566!2.52e-84!172;CL:0002032!5.11e-80!165;CL:0000837!5.11e-80!165;CL:0000988!8.97e-78!182;CL:0002031!5.72e-73!124;CL:0002087!2.33e-70!119;CL:0000766!2.77e-56!76;CL:0000763!6.89e-52!112;CL:0000049!6.89e-52!112;CL:0000557!2.61e-49!71;CL:0000839!3.71e-46!70;CL:0002009!2.19e-44!65;CL:0002057!8.30e-43!42;CL:0002194!3.31e-42!63;CL:0000576!3.31e-42!63;CL:0000040!3.31e-42!63;CL:0000559!3.31e-42!63;CL:0000860!5.31e-39!45;CL:0000134!1.74e-23!358;CL:0000542!3.18e-23!53;CL:0000051!3.18e-23!53;CL:0000838!2.09e-22!52;CL:0002320!2.10e-22!365;CL:0000219!1.27e-18!390;CL:0000945!5.73e-18!24;CL:0000826!5.73e-18!24;CL:0000048!3.46e-14!430;CL:0000034!6.58e-14!444;CL:0002393!1.37e-13!9;CL:0002397!1.37e-13!9;CL:0000723!1.44e-13!436;CL:0000236!6.84e-13!14;CL:0000094!3.05e-09!8;CL:0000084!1.19e-07!25;CL:0000827!1.19e-07!25;CL:0000840!1.44e-07!5;CL:0001029!1.44e-07!5;CL:0002274!2.04e-07!5;CL:0000457!2.04e-07!5;CL:0002191!2.04e-07!5;CL:0000097!2.04e-07!5;CL:0000831!2.04e-07!5;CL:0002028!2.04e-07!5 | ||
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|ontology_enrichment_development_v019=CL:0002057;2.74e-43;42!CL:0000049;2.54e-12;108 | |ontology_enrichment_development_v019=CL:0002057;2.74e-43;42!CL:0000049;2.54e-12;108 | ||
|ontology_enrichment_disease=DOID:2531!9.42e-10!51;DOID:0060083!9.42e-10!51;DOID:1240!3.40e-08!39 | |ontology_enrichment_disease=DOID:2531!9.42e-10!51;DOID:0060083!9.42e-10!51;DOID:1240!3.40e-08!39 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.50e-59!102;UBERON:0003061!6.50e-59!102;UBERON:0002193!7.03e-55!112;UBERON:0002371!8.04e-45!80;UBERON:0001474!2.51e-40!86;UBERON:0002405!4.74e-35!115;UBERON:0004765!1.81e-31!101;UBERON:0001434!1.81e-31!101;UBERON:0002384!6.19e-21!375;UBERON:0003081!3.46e-18!216;UBERON:0002204!1.23e-12!167;UBERON:0000178!1.85e-09!15;UBERON:0000179!1.85e-09!15;UBERON:0000463!1.85e-09!15 | |ontology_enrichment_uberon=UBERON:0002390!6.50e-59!102;UBERON:0003061!6.50e-59!102;UBERON:0002193!7.03e-55!112;UBERON:0002371!8.04e-45!80;UBERON:0001474!2.51e-40!86;UBERON:0002405!4.74e-35!115;UBERON:0004765!1.81e-31!101;UBERON:0001434!1.81e-31!101;UBERON:0002384!6.19e-21!375;UBERON:0003081!3.46e-18!216;UBERON:0002204!1.23e-12!167;UBERON:0000178!1.85e-09!15;UBERON:0000179!1.85e-09!15;UBERON:0000463!1.85e-09!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.01e-09;15!UBERON:0000179;3.01e-09;15!UBERON:0000463;3.01e-09;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;3.01e-09;15!UBERON:0000179;3.01e-09;15!UBERON:0000463;3.01e-09;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.62e-49,98;UBERON:0003061,7.62e-49,98;UBERON:0002193,2.34e-43,108;UBERON:0002371,3.79e-42,76;UBERON:0001474,2.01e-38,82;UBERON:0002405,6.41e-35,93;UBERON:0004765,3.18e-34,90;UBERON:0001434,6.45e-30,100;UBERON:0003081,3.81e-18,203;UBERON:0002384,1.79e-14,371;UBERON:0002204,2.16e-14,167;UBERON:0000178,4.99e-09,15;UBERON:0000179,4.99e-09,15;UBERON:0000463,4.99e-09,15;UBERON:0000926,4.19e-08,315;UBERON:0004120,4.19e-08,315;UBERON:0006603,4.19e-08,315 | |||
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|short_description=p8@PTPN6 | |short_description=p8@PTPN6 | ||
}} | }} |
Latest revision as of 08:17, 20 September 2015
Short description: | p8@PTPN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PTPN6_5end |
Coexpression cluster: | C2236_Eosinophils_Neutrophils_CD14CD16_CD14_Mast_Whole_CD19 |
Association with transcript: | 11bp_to_ENST00000539365_5end |
EntrezGene: | PTPN6 |
HGNC: | 9658 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.62e-49 | 98 |
blood island | 7.62e-49 | 98 |
hemolymphoid system | 2.34e-43 | 108 |
bone marrow | 3.79e-42 | 76 |
bone element | 2.01e-38 | 82 |
immune system | 6.41e-35 | 93 |
skeletal element | 3.18e-34 | 90 |
skeletal system | 6.45e-30 | 100 |
lateral plate mesoderm | 3.81e-18 | 203 |
connective tissue | 1.79e-14 | 371 |
musculoskeletal system | 2.16e-14 | 167 |
blood | 4.99e-09 | 15 |
haemolymphatic fluid | 4.99e-09 | 15 |
organism substance | 4.99e-09 | 15 |
mesoderm | 4.19e-08 | 315 |
mesoderm-derived structure | 4.19e-08 | 315 |
presumptive mesoderm | 4.19e-08 | 315 |