FFCP PHASE1:Hg19::chr17:8397217..8397222,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:8397217..8397222,+ | |||
|coexpression_cluster_id=C306 | |coexpression_cluster_id=C306 | ||
|description=CAGE_peak_at_chr17:8397217..8397222,+ | |description=CAGE_peak_at_chr17:8397217..8397222,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000037!3.60e-14!172;CL:0000566!3.60e-14!172;CL:0000738!1.04e-13!140;CL:0000988!2.49e-13!182;CL:0002032!4.91e-12!165;CL:0000837!4.91e-12!165;CL:0002031!8.81e-10!124;CL:0002087!4.48e-09!119;CL:0000624!7.09e-08!6;CL:0000838!7.22e-08!52;CL:0000542!1.43e-07!53;CL:0000051!1.43e-07!53;CL:0000163!7.07e-07!9 | |ontology_enrichment_celltype=CL:0000037!3.60e-14!172;CL:0000566!3.60e-14!172;CL:0000738!1.04e-13!140;CL:0000988!2.49e-13!182;CL:0002032!4.91e-12!165;CL:0000837!4.91e-12!165;CL:0002031!8.81e-10!124;CL:0002087!4.48e-09!119;CL:0000624!7.09e-08!6;CL:0000838!7.22e-08!52;CL:0000542!1.43e-07!53;CL:0000051!1.43e-07!53;CL:0000163!7.07e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000775;5.53e-27;3!CL:0000623;1.12e-26;3!CL:0000094;6.27e-18;8!CL:0000624;4.71e-14;6!CL:0000081;4.22e-13;11!CL:0000791;2.31e-12;18!CL:0000789;2.31e-12;18!CL:0002419;2.31e-12;18!CL:0000226;2.67e-12;3!CL:0000842;2.67e-12;3!CL:0000084;7.51e-09;25!CL:0000542;1.43e-08;53 | |ontology_enrichment_celltype_v019=CL:0000775;5.53e-27;3!CL:0000623;1.12e-26;3!CL:0000094;6.27e-18;8!CL:0000624;4.71e-14;6!CL:0000081;4.22e-13;11!CL:0000791;2.31e-12;18!CL:0000789;2.31e-12;18!CL:0002419;2.31e-12;18!CL:0000226;2.67e-12;3!CL:0000842;2.67e-12;3!CL:0000084;7.51e-09;25!CL:0000542;1.43e-08;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000775,3.89e-27,3;CL:0000623,1.22e-26,3;CL:0000825,1.22e-26,3;CL:0000738,5.22e-20,136;CL:0000094,5.05e-18,8;CL:0000037,1.25e-15,168;CL:0000838,2.05e-15,52;CL:0000542,4.28e-15,53;CL:0000051,4.28e-15,53;CL:0000988,1.12e-14,177;CL:0000624,4.72e-14,6;CL:0000081,3.61e-13,11;CL:0002032,8.63e-13,161;CL:0000837,8.63e-13,161;CL:0000226,1.78e-12,3;CL:0000842,1.78e-12,3;CL:0000791,2.37e-12,18;CL:0000789,2.37e-12,18;CL:0002420,2.37e-12,18;CL:0002419,2.37e-12,18;CL:0000790,2.37e-12,18;CL:0002087,2.40e-12,115;CL:0002031,5.10e-10,120;CL:0000084,7.64e-09,25;CL:0000827,7.64e-09,25 | |||
|ontology_enrichment_development_v019=CL:0000790;2.31e-12;18!CL:0000051;1.43e-08;53 | |ontology_enrichment_development_v019=CL:0000790;2.31e-12;18!CL:0000051;1.43e-08;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0.328402357799783,0,0,0.767658796194425,0,0,0,0,0.232401601740905,0.142169232487422,0.293600439334847,0.553995408531877,1.20326668482085,1.08505435357926,0,0,0,0.581592955118259,0,0.242584061187816,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0.425208599930087,0.419317291016752,0,0.300353785683013,0.16072558669708,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,1.76171156811282,2.6759125968766,0,0,0,3.14735632182133,5.89516144123747,2.87842098599313,0,0.977766799900771,0.473447805734733,0,0.222820913770347,0.589211814949674,0.443067789167242,0.541607727530031,0.512365278902701,0.520237390239513,0.493313713811028,0.276350017785848,0.289803085735052,0.296573126324121,0,0,0,0.383220493601921,1.03088233644789,0.506039384039006,0,0,0,0,0,0,0,0.821127996921047,0.80642697289893,4.27904313253612,3.04131248153878,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0.351339142772504,0,0,0,0,0,0,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.088048434013226,0.207328115540772,2.88239906833923,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0,0.112085143993527,1.37921532141349,2.80315847317372,2.05348858047597,0,0,0,0,0,2.99602809578873,5.9832291840805,1.24324654030811,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0,1.6541442089831,1.72571360654893,0.853820462427555,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0.650060246036521,0,0,0,0,0,0.214840489736547,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0.79312517629427,0.106824071127473,0,0.735120647943095,0,0.144269212976445,0.0711418433484141,0,0,0,0,0,0.280797178113459,0,0.156679895773023,0,0.169291777801603,0.321176150207399,0.201799707191048,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0.242721043499027,0.891547074219827,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0.306806047506464,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.520855522170466,0,0,0,0.254253650292766,0,0,0.583209226766509,0.347249989866585,0,0.120596438625408,0,0,0,0,0.10893846351899,0.41827123283581,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0.156980256395025,0,0.225595660617181,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0.0884575645033392,0,0.593042257361244,0,0.104421949505455,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0.60129367765797,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0.146178634172371,0,0,0.264768380074501,0.225980740780532,0,0,0,0.586654148204409,0,0,0,0,0,0.343189995723929,0,0,0.235694034616795,0,0.104602846312333,0,0,1.20084057741958,0.136905378891993,0,0.429765441419957,0,0,0,0,0.399358000997982,0,0.223171457441873,0,0,0,0,0.0824158583811665,0.0674035438541849,0.196854963029498,0.0846733320657845,0,0,0,0,0,0.899895566206002,0,0,0.335434687599266,0.0788057072991982,0,0.422401346077626,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0.164185041498678,0.170388021785422,0,0,0,0.517131825446202,0,0,0,0.106787412567695,0,0,0,0.395223263795889,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0.57785949122191,0.214441591374926,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0.327609848846413,0,0,0.19998739585493,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0.212574920101683,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0.150420656698515,0,0,0,0.49131575253029,0,0,0,0,0,1.09394961803644,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.177404740325278,0.230467975111559,0,0.135939465953663,0,0,0.111231401892069,0,0,0.840816489941367,0,0.215927591218621,0.47775168788705,0.142953088353313,0,0,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0.111855431797792,0.196300467230486,0.121917924982269,0.647428837187895,0,0,0,0,0,0.118920090777569,0,0,0.603851374266694,0,0,0.470317296361523,0,0,0,0,0,0,0,0.0644578879735772,0,1.07132363163395,0.352894871715692,0.160482733378337,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0.0757786982182394,0,0,0,0,0.23806443146374,0.0645889098360061,0,0.224263725161227,0,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0,0,0.106727345877715,0,0.179650404213174,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0.328402357799783,0,0,0.767658796194425,0,0,0,0,0.232401601740905,0.142169232487422,0.293600439334847,0.553995408531877,1.20326668482085,1.08505435357926,0,0,0,0.581592955118259,0,0.242584061187816,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0.425208599930087,0.419317291016752,0,0.300353785683013,0.16072558669708,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,1.76171156811282,2.6759125968766,0,0,0,3.14735632182133,5.89516144123747,2.87842098599313,0,0.977766799900771,0.473447805734733,0,0.222820913770347,0.589211814949674,0.443067789167242,0.541607727530031,0.512365278902701,0.520237390239513,0.493313713811028,0.276350017785848,0.289803085735052,0.296573126324121,0,0,0,0.383220493601921,1.03088233644789,0.506039384039006,0,0,0,0,0,0,0,0.821127996921047,0.80642697289893,4.27904313253612,3.04131248153878,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0.351339142772504,0,0,0,0,0,0,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.088048434013226,0.207328115540772,2.88239906833923,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0,0.112085143993527,1.37921532141349,2.80315847317372,2.05348858047597,0,0,0,0,0,2.99602809578873,5.9832291840805,1.24324654030811,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0,1.6541442089831,1.72571360654893,0.853820462427555,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0.650060246036521,0,0,0,0,0,0.214840489736547,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0.79312517629427,0.106824071127473,0,0.735120647943095,0,0.144269212976445,0.0711418433484141,0,0,0,0,0,0.280797178113459,0,0.156679895773023,0,0.169291777801603,0.321176150207399,0.201799707191048,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0.242721043499027,0.891547074219827,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0.306806047506464,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.520855522170466,0,0,0,0.254253650292766,0,0,0.583209226766509,0.347249989866585,0,0.120596438625408,0,0,0,0,0.10893846351899,0.41827123283581,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0.156980256395025,0,0.225595660617181,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0.0884575645033392,0,0.593042257361244,0,0.104421949505455,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0.60129367765797,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0.146178634172371,0,0,0.264768380074501,0.225980740780532,0,0,0,0.586654148204409,0,0,0,0,0,0.343189995723929,0,0,0.235694034616795,0,0.104602846312333,0,0,1.20084057741958,0.136905378891993,0,0.429765441419957,0,0,0,0,0.399358000997982,0,0.223171457441873,0,0,0,0,0.0824158583811665,0.0674035438541849,0.196854963029498,0.0846733320657845,0,0,0,0,0,0.899895566206002,0,0,0.335434687599266,0.0788057072991982,0,0.422401346077626,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0.164185041498678,0.170388021785422,0,0,0,0.517131825446202,0,0,0,0.106787412567695,0,0,0,0.395223263795889,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0.57785949122191,0.214441591374926,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0.327609848846413,0,0,0.19998739585493,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0.212574920101683,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0.150420656698515,0,0,0,0.49131575253029,0,0,0,0,0,1.09394961803644,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.177404740325278,0.230467975111559,0,0.135939465953663,0,0,0.111231401892069,0,0,0.840816489941367,0,0.215927591218621,0.47775168788705,0.142953088353313,0,0,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0.111855431797792,0.196300467230486,0.121917924982269,0.647428837187895,0,0,0,0,0,0.118920090777569,0,0,0.603851374266694,0,0,0.470317296361523,0,0,0,0,0,0,0,0.0644578879735772,0,1.07132363163395,0.352894871715692,0.160482733378337,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0.0757786982182394,0,0,0,0,0.23806443146374,0.0645889098360061,0,0.224263725161227,0,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0,0,0.106727345877715,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p@chr17:8397217..8397222,+ | |short_description=p@chr17:8397217..8397222,+ | ||
}} | }} |
Latest revision as of 23:22, 25 July 2015
Short description: | p@chr17:8397217..8397222, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:8397217..8397222, + |
Coexpression cluster: | C306_CD4_CD8_Neutrophils_Natural_CD19_CD14_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 3.89e-27 | 3 |
natural killer cell | 1.22e-26 | 3 |
pro-NK cell | 1.22e-26 | 3 |
leukocyte | 5.22e-20 | 136 |
granulocyte | 5.05e-18 | 8 |
hematopoietic stem cell | 1.25e-15 | 168 |
lymphoid lineage restricted progenitor cell | 2.05e-15 | 52 |
lymphocyte | 4.28e-15 | 53 |
common lymphoid progenitor | 4.28e-15 | 53 |
hematopoietic cell | 1.12e-14 | 177 |
CD4-positive, alpha-beta T cell | 4.72e-14 | 6 |
blood cell | 3.61e-13 | 11 |
hematopoietic oligopotent progenitor cell | 8.63e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.63e-13 | 161 |
single nucleate cell | 1.78e-12 | 3 |
mononuclear cell | 1.78e-12 | 3 |
mature alpha-beta T cell | 2.37e-12 | 18 |
alpha-beta T cell | 2.37e-12 | 18 |
immature T cell | 2.37e-12 | 18 |
mature T cell | 2.37e-12 | 18 |
immature alpha-beta T cell | 2.37e-12 | 18 |
nongranular leukocyte | 2.40e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 5.10e-10 | 120 |
T cell | 7.64e-09 | 25 |
pro-T cell | 7.64e-09 | 25 |