FFCP PHASE1:Hg19::chr8:74827261..74827267,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=39712 | |HGNC=39712 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_ENST00000460864_5end | |association_with_transcript=-16bp_to_ENST00000460864_5end | ||
|cluster_id=chr8:74827261..74827267,- | |||
|description=CAGE_peak_1_at_GYG1P1_5end | |description=CAGE_peak_1_at_GYG1P1_5end | ||
|id=chr8:74827261..74827267,- | |id=chr8:74827261..74827267,- | ||
|ontology_enrichment_celltype=CL:0000220!4.65e-07!246;CL:0002321!8.69e-07!248 | |ontology_enrichment_celltype=CL:0000220!4.65e-07!246;CL:0002321!8.69e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002591;2.71e-19;1!CL:0002589;2.48e-10;2!CL:0000359;3.78e-09;32!CL:0002573;2.63e-07;2!CL:0002328;2.63e-07;3!CL:0002590;2.63e-07;3 | |ontology_enrichment_celltype_v019=CL:0002591;2.71e-19;1!CL:0002589;2.48e-10;2!CL:0000359;3.78e-09;32!CL:0002573;2.63e-07;2!CL:0002328;2.63e-07;3!CL:0002590;2.63e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002591,2.25e-19,1;CL:0002589,2.72e-10,2;CL:0000359,2.68e-09,32;CL:0002590,2.63e-07,3;CL:0002328,2.97e-07,3;CL:0002573,3.16e-07,2;CL:0000192,5.46e-07,43;CL:0000514,5.46e-07,43 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!1.38e-08!625;UBERON:0000480!1.82e-08!626;UBERON:0000468!3.79e-08!659;UBERON:0002049!2.47e-07!79;UBERON:0007798!2.47e-07!79;UBERON:0000477!2.58e-07!286;UBERON:0000055!7.06e-07!69;UBERON:0000483!7.14e-07!309;UBERON:0000119!7.32e-07!312 | |ontology_enrichment_uberon=UBERON:0000467!1.38e-08!625;UBERON:0000480!1.82e-08!626;UBERON:0000468!3.79e-08!659;UBERON:0002049!2.47e-07!79;UBERON:0007798!2.47e-07!79;UBERON:0000477!2.58e-07!286;UBERON:0000055!7.06e-07!69;UBERON:0000483!7.14e-07!309;UBERON:0000119!7.32e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0000078;2.48e-10;2!UBERON:0002012;2.48e-10;2!UBERON:0001529;2.48e-10;2!UBERON:0007204;2.48e-10;2!UBERON:0008886;2.48e-10;2!UBERON:0004815;2.63e-07;3!UBERON:0002031;2.63e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000078;2.48e-10;2!UBERON:0002012;2.48e-10;2!UBERON:0001529;2.48e-10;2!UBERON:0007204;2.48e-10;2!UBERON:0008886;2.48e-10;2!UBERON:0004815;2.63e-07;3!UBERON:0002031;2.63e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,2.27e-10,2;UBERON:0007497,2.27e-10,2;UBERON:0003643,2.27e-10,2;UBERON:0003504,2.27e-10,2;UBERON:0003469,2.27e-10,2;UBERON:0003496,2.27e-10,2;UBERON:0002012,2.27e-10,2;UBERON:0008886,2.27e-10,2;UBERON:0007303,2.27e-10,2;UBERON:0002061,2.27e-10,2;UBERON:0005432,2.27e-10,2;UBERON:0004363,2.27e-10,2;UBERON:0001529,2.72e-10,2;UBERON:0007204,2.72e-10,2;UBERON:0000485,6.11e-09,9;UBERON:0004145,2.47e-07,3;UBERON:0004815,2.97e-07,3;UBERON:0002031,2.97e-07,3 | |||
|phase1_expression=0.908391896352783,0,0,0,0,0,0,0,0,0,0,0,0.527533956456907,0.37129905888014,0,0,0.602694528023977,0,0,0.123121058076788,0,0.313454721478088,0,0.547497700291537,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0.30120591877825,1.10926203050036,0,0,0,0,0,0,0,0,0,0.581592955118259,0.377875943688809,0,0,0,0,0.28769239232215,0.512321413058201,0.47296445977717,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0.521482918420201,0,0,0,0.316462387440884,0,0,0,0.336985893439485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.434539556882471,0,0,0.661743720148475,0,0.43917392846563,0.0654895377488563,0,0,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0.347140501607594,0,0.419499436209906,0,0,0.775250277507987,0.35576626268671,0.33472061276467,0.805658634218294,0,0.24406205754817,0,0.81014194788176,0.446498641420399,0,0.112611480483322,1.53316637465883,0.949265659568129,0.366403487860815,0,0,0,0,0.25326102332916,0.132409180813219,0,0.354668382198357,1.68203280042692,0,0.24666754841716,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0,0,0.204154171254893,0.368502951935304,0.103325781175765,1.18800285728205,0,0.910161361938026,0,0.336672227908132,0.125118519871964,0,0,0,0,0.226864366320042,0,0,0.423863802319124,0,0.309157587715317,0,0,0.506328996723799,0.0974370051611986,0.252433774244115,0.276149695926898,0,0,0.403008392910561,0.169560592310488,0.193260853163297,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0.464367928031979,0,0.118306800039844,0.337169380156203,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0.109750285408626,2.24803506515239,0.402115889646523,0.0925884451585296,0.651616610620649,0,0,0.811512834825538,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0.141775097242386,0.358234090811393,0,0.383382679165211,0.492663237895943,0.176096868026452,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.4400297149257,0.517086863031111,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0.399891964728228,0,0,0,0.239624855491583,0,0,0.434343920002738,0.205476322550383,0,0.224170287987055,0,0.215627574859517,0.256686072559497,0,0,0,0.335032530668698,0,0,0,0.414415513436035,0,0,0,0.415941723061614,0.356857977594324,0.473107245101804,0.234282829985426,0,0,0,0,0.368738337083406,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0.604780586659361,0,0.306923946576125,0,0.128139149255701,0,0,0,0.154209693802656,0.355123450626254,0.410635780069046,0,0.116210378459959,0,0.200506470303285,0.184161977871793,0.34444334449382,0,0.131124414959424,0.451199612907412,0.385076685522074,0,0,0.73886140225013,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0,0.769350375349168,0,0,0,0.0915694648183434,0,0,0.650060246036521,0,0.193341436584244,0,0.15350367472613,0.551346289938122,0.214840489736547,0,0.340906509664404,0.267096106940212,0.165284915360978,0,0,0.10115778085555,0,0,0,0.924100740528266,0,0.869932992075073,1.11194531462352,0.715624433709956,1.116475108079,0.316379424718726,0,0.255897791311334,0,0.318203247925937,0,0,0.274537029736055,0.117812402345686,0.606547444719948,0,0.421258456238981,0.48763373908959,0,0,0,0,1.13008116620243,0,0.66343897524122,0.438450885253763,0,0,0.405820753925408,0.30982349809975,0,0.573645408816206,0.491245205065606,1.07001315444375,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0.384888450902048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.185803175125719,0,0,0.159426272728822,0,0,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.47748896947538,0,0.921482106297696,0,0.140669416410513,0.445234820091624,0.16480387422676,0,0.398495976502139,0,0,0.409074730008619,0,0,0.449341755736634,0,0,0.394573622547734,0,0,0,0.371072392647405,0,0,0.0874599999961957,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0.241192877250816,0,0,0.295547618953547,0,0,0.557694977114413,0.0769502585037971,0.569710279235006,0,0,0,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0.468528891450678,0,0,0,0,0,0,0.189559738885464,0.450970258243478,0.103688191397247,0,0.661983911750998,0,0,0,0.138674673013139,0,0.0979923974143777,0.34823682632161,0,0.171986032471617,0.290268993867255,0.0730893170861856,0.0821154570532092,0.678923115418936,0.264768380074501,0,0.137041924646751,0.19871461170299,0.316553979779393,0,0.160317640503067,0,0.19980960958213,0.144090417154106,0,0,3.31326035372744,0,0,0,0.209205692624666,0,0.577901179803038,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0.858452096273142,0.669514372325618,0.0671834724867263,0.360299883542404,0,0.0787831823072236,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.364497339948148,0,0.0788057072991982,0.104909176269996,0.422401346077626,0.179287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| ||
|short_description=p1@GYG1P1 | |short_description=p1@GYG1P1 | ||
}} | }} |
Latest revision as of 02:17, 19 September 2015
Short description: | p1@GYG1P1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GYG1P1_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_ENST00000460864_5end |
EntrezGene: | NA |
HGNC: | 39712 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 2.25e-19 | 1 |
smooth muscle cell of the brachiocephalic vasculature | 2.72e-10 | 2 |
vascular associated smooth muscle cell | 2.68e-09 | 32 |
smooth muscle cell of the brain vasculature | 2.63e-07 | 3 |
bronchial epithelial cell | 2.97e-07 | 3 |
Schwann cell | 3.16e-07 | 2 |
smooth muscle cell | 5.46e-07 | 43 |
smooth muscle myoblast | 5.46e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 2.27e-10 | 2 |
developing epithelial placode | 2.27e-10 | 2 |
respiratory system arterial blood vessel | 2.27e-10 | 2 |
respiratory system blood vessel | 2.27e-10 | 2 |
respiratory system artery | 2.27e-10 | 2 |
head blood vessel | 2.27e-10 | 2 |
pulmonary artery | 2.27e-10 | 2 |
pulmonary vascular system | 2.27e-10 | 2 |
pharyngeal vasculature | 2.27e-10 | 2 |
truncus arteriosus | 2.27e-10 | 2 |
aortic sac | 2.27e-10 | 2 |
pharyngeal arch artery | 2.27e-10 | 2 |
brachiocephalic artery | 2.72e-10 | 2 |
brachiocephalic vasculature | 2.72e-10 | 2 |
simple columnar epithelium | 6.11e-09 | 9 |
outflow tract | 2.47e-07 | 3 |
lower respiratory tract epithelium | 2.97e-07 | 3 |
epithelium of bronchus | 2.97e-07 | 3 |