FFCP PHASE1:Hg19::chr16:15736953..15737025,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9665 | |EntrezGene=9665 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29562 | |HGNC=29562 | ||
|TSSclassifier=strong | |||
|UniProt=C9JKX0,Q9Y4F3,F8VV09 | |UniProt=C9JKX0,Q9Y4F3,F8VV09 | ||
|association_with_transcript=0bp_to_ENST00000321370,ENST00000344181,ENST00000396368,ENST00000548025,ENST00000548216,ENST00000551742,NM_001184998,NM_001184999,NM_014647,uc002ddr.2,uc010uzv.1,uc010uzw.1,uc010uzx.1_5end | |association_with_transcript=0bp_to_ENST00000321370,ENST00000344181,ENST00000396368,ENST00000548025,ENST00000548216,ENST00000551742,NM_001184998,NM_001184999,NM_014647,uc002ddr.2,uc010uzv.1,uc010uzw.1,uc010uzx.1_5end | ||
|cluster_id=chr16:15736953..15737025,- | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_1_at_KIAA0430_5end | |description=CAGE_peak_1_at_KIAA0430_5end | ||
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|ontology_enrichment_celltype=CL:0000738!4.32e-15!140;CL:0000037!7.71e-12!172;CL:0000566!7.71e-12!172;CL:0002031!1.68e-11!124;CL:0002087!8.39e-11!119;CL:0002032!9.93e-11!165;CL:0000837!9.93e-11!165;CL:0000766!2.17e-10!76;CL:0000988!2.58e-09!182;CL:0000839!3.51e-08!70;CL:0002057!2.75e-07!42;CL:0000763!5.86e-07!112;CL:0000049!5.86e-07!112;CL:0000557!6.76e-07!71 | |ontology_enrichment_celltype=CL:0000738!4.32e-15!140;CL:0000037!7.71e-12!172;CL:0000566!7.71e-12!172;CL:0002031!1.68e-11!124;CL:0002087!8.39e-11!119;CL:0002032!9.93e-11!165;CL:0000837!9.93e-11!165;CL:0000766!2.17e-10!76;CL:0000988!2.58e-09!182;CL:0000839!3.51e-08!70;CL:0002057!2.75e-07!42;CL:0000763!5.86e-07!112;CL:0000049!5.86e-07!112;CL:0000557!6.76e-07!71 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.39e-16,136;CL:0000037,5.77e-13,168;CL:0002031,7.63e-13,120;CL:0002087,4.02e-12,115;CL:0000766,4.17e-12,72;CL:0002032,8.23e-12,161;CL:0000837,8.23e-12,161;CL:0000988,1.19e-10,177;CL:0000839,1.04e-09,66;CL:0000557,3.11e-08,67;CL:0002194,5.61e-08,59;CL:0000576,5.61e-08,59;CL:0000040,5.61e-08,59;CL:0000559,5.61e-08,59;CL:0000763,5.71e-08,108;CL:0000049,5.71e-08,108;CL:0002009,2.56e-07,61;CL:0000860,2.75e-07,42;CL:0002057,2.75e-07,42;CL:0000473,3.93e-07,48;CL:0000234,3.93e-07,48 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.01e-07;82 | |ontology_enrichment_development_v019=UBERON:0006601;2.01e-07;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.94e-49!115;UBERON:0001049!8.63e-18!57;UBERON:0005068!8.63e-18!57;UBERON:0006241!8.63e-18!57;UBERON:0007135!8.63e-18!57;UBERON:0002616!1.12e-15!59;UBERON:0002780!1.18e-15!41;UBERON:0001890!1.18e-15!41;UBERON:0006240!1.18e-15!41;UBERON:0003080!6.10e-15!42;UBERON:0000955!5.84e-14!69;UBERON:0006238!5.84e-14!69;UBERON:0002020!8.41e-13!34;UBERON:0003528!8.41e-13!34;UBERON:0001893!9.68e-13!34;UBERON:0002791!3.65e-12!33;UBERON:0002346!6.77e-12!90;UBERON:0003075!8.01e-12!86;UBERON:0007284!8.01e-12!86;UBERON:0001017!8.38e-12!82;UBERON:0001869!8.51e-12!32;UBERON:0000073!6.21e-11!94;UBERON:0001016!6.21e-11!94;UBERON:0005743!6.90e-11!86;UBERON:0002390!2.98e-10!102;UBERON:0003061!2.98e-10!102;UBERON:0002619!5.18e-10!22;UBERON:0002193!4.23e-09!112;UBERON:0001950!4.89e-09!20;UBERON:0000956!1.90e-08!25;UBERON:0000203!1.90e-08!25;UBERON:0003056!5.72e-08!61 | |ontology_enrichment_uberon=UBERON:0007023!3.94e-49!115;UBERON:0001049!8.63e-18!57;UBERON:0005068!8.63e-18!57;UBERON:0006241!8.63e-18!57;UBERON:0007135!8.63e-18!57;UBERON:0002616!1.12e-15!59;UBERON:0002780!1.18e-15!41;UBERON:0001890!1.18e-15!41;UBERON:0006240!1.18e-15!41;UBERON:0003080!6.10e-15!42;UBERON:0000955!5.84e-14!69;UBERON:0006238!5.84e-14!69;UBERON:0002020!8.41e-13!34;UBERON:0003528!8.41e-13!34;UBERON:0001893!9.68e-13!34;UBERON:0002791!3.65e-12!33;UBERON:0002346!6.77e-12!90;UBERON:0003075!8.01e-12!86;UBERON:0007284!8.01e-12!86;UBERON:0001017!8.38e-12!82;UBERON:0001869!8.51e-12!32;UBERON:0000073!6.21e-11!94;UBERON:0001016!6.21e-11!94;UBERON:0005743!6.90e-11!86;UBERON:0002390!2.98e-10!102;UBERON:0003061!2.98e-10!102;UBERON:0002619!5.18e-10!22;UBERON:0002193!4.23e-09!112;UBERON:0001950!4.89e-09!20;UBERON:0000956!1.90e-08!25;UBERON:0000203!1.90e-08!25;UBERON:0003056!5.72e-08!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.04e-13;114!UBERON:0002780;1.61e-11;41!UBERON:0001890;1.61e-11;41!UBERON:0001893;3.38e-11;34!UBERON:0003528;8.29e-11;34!UBERON:0002020;8.29e-11;34!UBERON:0000073;9.36e-11;53!UBERON:0002616;9.36e-11;53!UBERON:0001869;1.50e-10;32!UBERON:0002791;1.87e-10;32!UBERON:0002619;4.89e-10;22!UBERON:0001950;4.77e-09;20!UBERON:0000956;1.88e-08;25!UBERON:0000203;1.88e-08;25!UBERON:0001017;2.08e-07;75!UBERON:0000955;2.87e-07;68 | |ontology_enrichment_uberon_v019=UBERON:0007023;2.04e-13;114!UBERON:0002780;1.61e-11;41!UBERON:0001890;1.61e-11;41!UBERON:0001893;3.38e-11;34!UBERON:0003528;8.29e-11;34!UBERON:0002020;8.29e-11;34!UBERON:0000073;9.36e-11;53!UBERON:0002616;9.36e-11;53!UBERON:0001869;1.50e-10;32!UBERON:0002791;1.87e-10;32!UBERON:0002619;4.89e-10;22!UBERON:0001950;4.77e-09;20!UBERON:0000956;1.88e-08;25!UBERON:0000203;1.88e-08;25!UBERON:0001017;2.08e-07;75!UBERON:0000955;2.87e-07;68 | ||
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| ||
|short_description=p1@KIAA0430 | |short_description=p1@KIAA0430 | ||
}} | }} |
Latest revision as of 18:54, 24 September 2015
Short description: | p1@KIAA0430 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KIAA0430_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000321370, ENST00000344181, ENST00000396368, ENST00000548025, ENST00000548216, ENST00000551742, NM_001184998, NM_001184999, NM_014647, uc002ddr.2, uc010uzv.1, uc010uzw.1, uc010uzx.1_5end |
EntrezGene: | KIAA0430 |
HGNC: | 29562 |
UniProt: | C9JKX0Q9Y4F3F8VV09 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.39e-16 | 136 |
hematopoietic stem cell | 5.77e-13 | 168 |
hematopoietic lineage restricted progenitor cell | 7.63e-13 | 120 |
nongranular leukocyte | 4.02e-12 | 115 |
myeloid leukocyte | 4.17e-12 | 72 |
hematopoietic oligopotent progenitor cell | 8.23e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.23e-12 | 161 |
hematopoietic cell | 1.19e-10 | 177 |
myeloid lineage restricted progenitor cell | 1.04e-09 | 66 |
granulocyte monocyte progenitor cell | 3.11e-08 | 67 |
monopoietic cell | 5.61e-08 | 59 |
monocyte | 5.61e-08 | 59 |
monoblast | 5.61e-08 | 59 |
promonocyte | 5.61e-08 | 59 |
myeloid cell | 5.71e-08 | 108 |
common myeloid progenitor | 5.71e-08 | 108 |
macrophage dendritic cell progenitor | 2.56e-07 | 61 |
classical monocyte | 2.75e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.75e-07 | 42 |
defensive cell | 3.93e-07 | 48 |
phagocyte | 3.93e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.12e-48 | 114 |
neural tube | 1.90e-18 | 56 |
neural rod | 1.90e-18 | 56 |
future spinal cord | 1.90e-18 | 56 |
neural keel | 1.90e-18 | 56 |
regional part of nervous system | 1.94e-17 | 53 |
regional part of brain | 1.94e-17 | 53 |
regional part of forebrain | 1.18e-15 | 41 |
forebrain | 1.18e-15 | 41 |
anterior neural tube | 1.18e-15 | 41 |
future forebrain | 1.18e-15 | 41 |
brain | 1.96e-14 | 68 |
future brain | 1.96e-14 | 68 |
brain grey matter | 8.41e-13 | 34 |
gray matter | 8.41e-13 | 34 |
telencephalon | 9.68e-13 | 34 |
central nervous system | 3.54e-12 | 81 |
nervous system | 3.90e-12 | 89 |
cerebral hemisphere | 8.51e-12 | 32 |
neurectoderm | 1.10e-11 | 86 |
regional part of telencephalon | 1.11e-11 | 32 |
hematopoietic system | 1.18e-11 | 98 |
blood island | 1.18e-11 | 98 |
neural plate | 1.28e-11 | 82 |
presumptive neural plate | 1.28e-11 | 82 |
hemolymphoid system | 2.57e-10 | 108 |
regional part of cerebral cortex | 5.18e-10 | 22 |
neocortex | 4.89e-09 | 20 |
pre-chordal neural plate | 1.06e-08 | 61 |
cerebral cortex | 1.90e-08 | 25 |
pallium | 1.90e-08 | 25 |
immune system | 6.34e-07 | 93 |
bone marrow | 6.34e-07 | 76 |