FFCP PHASE1:Hg19::chr17:7761234..7761252,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84316 | |EntrezGene=84316 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28212 | |HGNC=28212 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BRA0 | |UniProt=Q9BRA0 | ||
|association_with_transcript=-62bp_to_ENST00000333775,NM_032356,uc002gja.2_5end | |association_with_transcript=-62bp_to_ENST00000333775,NM_032356,uc002gja.2_5end | ||
|cluster_id=chr17:7761234..7761252,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_6_at_LSMD1_5end | |description=CAGE_peak_6_at_LSMD1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000317;1.03e-14;2!CL:1000448;1.03e-14;2!CL:0002308;1.03e-14;2!CL:0002140;1.03e-14;2!CL:0002581;3.32e-08;1!CL:0000362;2.09e-07;9 | |ontology_enrichment_celltype_v019=CL:0000317;1.03e-14;2!CL:1000448;1.03e-14;2!CL:0002308;1.03e-14;2!CL:0002140;1.03e-14;2!CL:0002581;3.32e-08;1!CL:0000362;2.09e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000317,1.68e-14,2;CL:1000448,1.68e-14,2;CL:0002308,1.68e-14,2;CL:0002140,1.68e-14,2;CL:0002581,2.69e-08,1;CL:0000362,2.39e-07,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!3.04e-11!235;DOID:14566!4.59e-11!239;DOID:0050687!3.14e-07!143 | |ontology_enrichment_disease=DOID:162!3.04e-11!235;DOID:14566!4.59e-11!239;DOID:0050687!3.14e-07!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;1.03e-14;2!UBERON:0007771;1.03e-14;2!UBERON:0003297;1.03e-14;2!UBERON:0001821;1.03e-14;2!UBERON:0003487;1.03e-14;2!UBERON:0001820;1.03e-14;2 | |ontology_enrichment_uberon_v019=UBERON:0002419;1.03e-14;2!UBERON:0007771;1.03e-14;2!UBERON:0003297;1.03e-14;2!UBERON:0001821;1.03e-14;2!UBERON:0003487;1.03e-14;2!UBERON:0001820;1.03e-14;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.68e-14,2;UBERON:0007771,1.68e-14,2;UBERON:0003297,1.68e-14,2;UBERON:0001821,1.68e-14,2;UBERON:0003487,1.68e-14,2;UBERON:0001820,1.68e-14,2;UBERON:0005089,1.68e-14,2;UBERON:0005088,1.68e-14,2 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0.491467873003018,0.697801167972428,0,0.263766978228454,0,0,0,0,0.730310090387373,0.487932798790507,0.123121058076788,0.408001382488506,0,0,0.136874425072884,0.376627918784408,0.534893840235659,0.903106483949403,0.787107813136792,0,0,0,0,0.30120591877825,0,0.697204805222715,0.995184627411951,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0.112328631146495,0.450530678524519,0,0,0,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0.263384084775077,0,0,1.02800749499755,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0.276350017785848,0.289803085735052,0,0.267540828089713,0,0.113309342697566,0,0,0.253019692019503,0,0,0.950452044448374,0.150575119077773,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0.255725123687061,0,0,0.144846518960824,0.795285947051099,0.486634870302636,0,0.221729397462564,0,4.25681995367566,0,0.370784442784429,0,0.174129737299267,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0.419499436209906,0.550236083880135,0.417989933073621,0,0,0.33472061276467,0.805658634218294,0,0,0,1.62028389576352,0,0,0.112611480483322,0,0,0.366403487860815,0,0,0,0.496971951695318,0,0.264818361626438,0,0,0.560677600142307,0,0,0,0,0.653847612453835,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0.117434498643765,0.323745888736263,0.842704840213491,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0.309157587715317,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0.302256294682921,0,0.193260853163297,0.272746120590835,1.14721838155602,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0.473227200159376,0.337169380156203,0,0.772057809126758,0.653638332277218,0.237270619111097,0.404493924480493,0.588664395376038,0.769494313892781,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0,0.343135620597051,0,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0,0,0.462985512576611,0.380508304469197,0,0,0,0.234004265139238,0,0,0,0.425325291727159,0.0895585227028483,0.581267877027924,0,0,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0.411309970813294,0.600686115687835,0.285826432630578,0.448524337381443,0,0.1466765716419,0.129271715757778,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,1.58390374586686,0,1.74306691720059,0.099972991182057,0,0,0,0.479249710983165,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0.591092280605782,0.215627574859517,0.77005821767849,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,2.27407504055985,0,0,0.184369168541703,0,0.195801157462741,0,0,0.215714200818617,0.106727557803444,0.303127571446259,1.66435439510497,0.907170879989041,0,0,0,0.256278298511402,0,0.482561763430822,1.48418066444991,0.462629081407967,0.177561725313127,0.164254312027618,0,0.348631135379878,0.120859449591622,0.200506470303285,0.460404944679482,0.114814448164607,0.182091168006717,0,0,0,1.56869953835371,0,0,0,0,0.431831832204279,0,0,0,1.01950509218015,0.831076008928724,0.223874754722178,0.877039506583738,1.0457418040996,0,0.328014645699706,0.325378394664303,0.103041011647722,0.183138929636687,0.165018999841176,1.14853107599234,1.30012049207304,0,0.290012154876366,0.154048617114644,0,0.275673144969061,0,0,0.340906509664404,0.178064071293475,0.330569830721956,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0.286249773483982,0,0.316379424718726,0,0.511795582622668,0,0.318203247925937,0.78494864019923,0.359744915166629,0.274537029736055,0.353437207037059,0.202182481573316,0,0,0,0.243713489631284,0,0.272999822815972,0,0,0,0,0.438450885253763,0,0,0,0.6196469961995,0.281695602532241,0,0.0982490410131212,0,0,0,0,1.89736586882858,0,0.0962221127255121,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,1.71528151186722,0,0.28853842595289,0.284567373393656,0.637705090915289,0,0,0,0,0,0.456469358066384,0.783399478865116,0,0,0.481764225311099,0.201799707191048,0.425846237690326,0,0.921722292925374,0.671028323677248,0,0.390776190804081,0.556812347790485,0,0.270455678475983,0.33307196799782,1.4098700508785,0.18714054040822,0.146508179271894,0,0.334330152832435,0.568272293612826,0.23874448473769,0,0,0,0.140669416410513,0,0.494411622680279,0.844501632511974,0.19924798825107,0,0,0,0.123084805461069,0,0.0898683511473268,1.79021174675609,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0.227586896570999,0.508507300585533,0.236387681767936,0.344743373241465,0.291604613383254,0.173624994933292,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0,0.435753854075961,0.41827123283581,0.0769502585037971,0.227884111694002,0,0.179515288819544,0.325942115766024,0.31900115973192,0.183195186803725,0,2.04386596391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| 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| ||
|short_description=p6@LSMD1 | |short_description=p6@LSMD1 | ||
}} | }} |
Latest revision as of 02:16, 18 September 2015
Short description: | p6@LSMD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LSMD1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -62bp_to_ENST00000333775, NM_032356, uc002gja.2_5end |
EntrezGene: | LSMD1 |
HGNC: | 28212 |
UniProt: | Q9BRA0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 1.68e-14 | 2 |
epithelial cell of sweat gland | 1.68e-14 | 2 |
epithelial cell of skin gland | 1.68e-14 | 2 |
acinar cell of sebaceous gland | 1.68e-14 | 2 |
perirenal preadipocyte | 2.69e-08 | 1 |
epidermal cell | 2.39e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skin gland | 1.68e-14 | 2 |
epidermis gland | 1.68e-14 | 2 |
gland of integumental system | 1.68e-14 | 2 |
sebaceous gland | 1.68e-14 | 2 |
skin sebaceous gland | 1.68e-14 | 2 |
sweat gland | 1.68e-14 | 2 |
sweat gland placode | 1.68e-14 | 2 |
sebaceous gland placode | 1.68e-14 | 2 |