FFCP PHASE1:Hg19::chr8:125577064..125577081,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9788 | |EntrezGene=9788 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20443 | |HGNC=20443 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-21bp_to_ENST00000522722_5end | |association_with_transcript=-21bp_to_ENST00000522722_5end | ||
|cluster_id=chr8:125577064..125577081,- | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_5_at_MTSS1_5end | |description=CAGE_peak_5_at_MTSS1_5end | ||
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|ontology_enrichment_celltype=CL:0000542!1.69e-33!53;CL:0000051!1.69e-33!53;CL:0000838!1.46e-32!52;CL:0000084!2.86e-25!25;CL:0000827!2.86e-25!25;CL:0000791!7.22e-24!18;CL:0000789!7.22e-24!18;CL:0002420!7.22e-24!18;CL:0002419!7.22e-24!18;CL:0000790!7.22e-24!18;CL:0000738!7.29e-17!140;CL:0000625!2.39e-15!11;CL:0002087!2.89e-14!119;CL:0000037!3.13e-14!172;CL:0000566!3.13e-14!172;CL:0000988!5.64e-13!182;CL:0002032!1.20e-12!165;CL:0000837!1.20e-12!165;CL:0000236!5.53e-12!14;CL:0002031!2.82e-11!124;CL:0000624!2.96e-09!6;CL:0000945!1.00e-07!24;CL:0000826!1.00e-07!24 | |ontology_enrichment_celltype=CL:0000542!1.69e-33!53;CL:0000051!1.69e-33!53;CL:0000838!1.46e-32!52;CL:0000084!2.86e-25!25;CL:0000827!2.86e-25!25;CL:0000791!7.22e-24!18;CL:0000789!7.22e-24!18;CL:0002420!7.22e-24!18;CL:0002419!7.22e-24!18;CL:0000790!7.22e-24!18;CL:0000738!7.29e-17!140;CL:0000625!2.39e-15!11;CL:0002087!2.89e-14!119;CL:0000037!3.13e-14!172;CL:0000566!3.13e-14!172;CL:0000988!5.64e-13!182;CL:0002032!1.20e-12!165;CL:0000837!1.20e-12!165;CL:0000236!5.53e-12!14;CL:0002031!2.82e-11!124;CL:0000624!2.96e-09!6;CL:0000945!1.00e-07!24;CL:0000826!1.00e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.01e-40;18!CL:0000789;3.01e-40;18!CL:0002419;3.01e-40;18!CL:0000084;1.50e-34;25!CL:0000542;1.85e-30;53!CL:0000625;3.56e-28;11!CL:0000236;1.01e-20;13!CL:0000624;2.58e-16;6!CL:0000945;5.00e-12;24!CL:0000898;2.98e-09;3!CL:0000623;2.10e-08;3!CL:0000767;2.33e-07;3!CL:0002087;3.04e-07;104 | |ontology_enrichment_celltype_v019=CL:0000791;3.01e-40;18!CL:0000789;3.01e-40;18!CL:0002419;3.01e-40;18!CL:0000084;1.50e-34;25!CL:0000542;1.85e-30;53!CL:0000625;3.56e-28;11!CL:0000236;1.01e-20;13!CL:0000624;2.58e-16;6!CL:0000945;5.00e-12;24!CL:0000898;2.98e-09;3!CL:0000623;2.10e-08;3!CL:0000767;2.33e-07;3!CL:0002087;3.04e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.05e-49,52;CL:0000542,1.04e-47,53;CL:0000051,1.04e-47,53;CL:0000791,2.64e-40,18;CL:0000789,2.64e-40,18;CL:0002420,2.64e-40,18;CL:0002419,2.64e-40,18;CL:0000790,2.64e-40,18;CL:0000084,1.52e-34,25;CL:0000827,1.52e-34,25;CL:0000625,3.66e-28,11;CL:0002087,7.28e-22,115;CL:0000738,1.03e-21,136;CL:0000236,4.37e-19,14;CL:0002031,6.53e-18,120;CL:0000037,1.64e-17,168;CL:0000624,2.18e-16,6;CL:0000988,4.73e-16,177;CL:0002032,1.62e-15,161;CL:0000837,1.62e-15,161;CL:0000945,5.26e-12,24;CL:0000826,5.26e-12,24;CL:0000898,2.82e-09,3;CL:0000623,2.61e-08,3;CL:0000825,2.61e-08,3;CL:0000767,1.54e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.01e-40;18!CL:0000051;1.85e-30;53 | |ontology_enrichment_development_v019=CL:0000790;3.01e-40;18!CL:0000051;1.85e-30;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.71e-11!15;UBERON:0000179!1.71e-11!15;UBERON:0000463!1.71e-11!15 | |ontology_enrichment_uberon=UBERON:0000178!1.71e-11!15;UBERON:0000179!1.71e-11!15;UBERON:0000463!1.71e-11!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.15e-18;15!UBERON:0000179;1.15e-18;15!UBERON:0000463;1.15e-18;15!UBERON:0002390;3.80e-11;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.15e-18;15!UBERON:0000179;1.15e-18;15!UBERON:0000463;1.15e-18;15!UBERON:0002390;3.80e-11;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.10e-18,15;UBERON:0000179,1.10e-18,15;UBERON:0000463,1.10e-18,15 | |||
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|short_description=p5@MTSS1 | |short_description=p5@MTSS1 | ||
}} | }} |
Latest revision as of 01:53, 16 September 2015
Short description: | p5@MTSS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MTSS1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -21bp_to_ENST00000522722_5end |
EntrezGene: | MTSS1 |
HGNC: | 20443 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.05e-49 | 52 |
lymphocyte | 1.04e-47 | 53 |
common lymphoid progenitor | 1.04e-47 | 53 |
mature alpha-beta T cell | 2.64e-40 | 18 |
alpha-beta T cell | 2.64e-40 | 18 |
immature T cell | 2.64e-40 | 18 |
mature T cell | 2.64e-40 | 18 |
immature alpha-beta T cell | 2.64e-40 | 18 |
T cell | 1.52e-34 | 25 |
pro-T cell | 1.52e-34 | 25 |
CD8-positive, alpha-beta T cell | 3.66e-28 | 11 |
nongranular leukocyte | 7.28e-22 | 115 |
leukocyte | 1.03e-21 | 136 |
B cell | 4.37e-19 | 14 |
hematopoietic lineage restricted progenitor cell | 6.53e-18 | 120 |
hematopoietic stem cell | 1.64e-17 | 168 |
CD4-positive, alpha-beta T cell | 2.18e-16 | 6 |
hematopoietic cell | 4.73e-16 | 177 |
hematopoietic oligopotent progenitor cell | 1.62e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.62e-15 | 161 |
lymphocyte of B lineage | 5.26e-12 | 24 |
pro-B cell | 5.26e-12 | 24 |
naive T cell | 2.82e-09 | 3 |
natural killer cell | 2.61e-08 | 3 |
pro-NK cell | 2.61e-08 | 3 |
basophil | 1.54e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.10e-18 | 15 |
haemolymphatic fluid | 1.10e-18 | 15 |
organism substance | 1.10e-18 | 15 |