FFCP PHASE1:Hg19::chr3:23958632..23958651,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6138 | |EntrezGene=6138 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10306 | |HGNC=10306 | ||
|TSSclassifier=strong | |||
|UniProt=E7ENU7,P61313,Q642I1 | |UniProt=E7ENU7,P61313,Q642I1 | ||
|association_with_transcript=0bp_to_ENST00000412097,ENST00000415719,ENST00000435882,ENST00000465786,ENST00000490223,ENST00000510788,uc003ccn.2,uc003cco.2,uc003ccp.2,uc011awi.1,uc011awj.1_5end | |association_with_transcript=0bp_to_ENST00000412097,ENST00000415719,ENST00000435882,ENST00000465786,ENST00000490223,ENST00000510788,uc003ccn.2,uc003cco.2,uc003ccp.2,uc011awi.1,uc011awj.1_5end | ||
|cluster_id=chr3:23958632..23958651,+ | |||
|coexpression_cluster_id=C527 | |coexpression_cluster_id=C527 | ||
|description=CAGE_peak_2_at_RPL15_5end | |description=CAGE_peak_2_at_RPL15_5end | ||
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|ontology_enrichment_celltype=CL:0000542!2.23e-20!53;CL:0000051!2.23e-20!53;CL:0000838!5.38e-20!52;CL:0002087!5.41e-15!119;CL:0000738!2.55e-13!140;CL:0002031!6.40e-13!124;CL:0000945!1.31e-10!24;CL:0000826!1.31e-10!24;CL:0000791!7.38e-10!18;CL:0000789!7.38e-10!18;CL:0002420!7.38e-10!18;CL:0002419!7.38e-10!18;CL:0000790!7.38e-10!18;CL:0000988!1.58e-09!182;CL:0000037!2.88e-09!172;CL:0000566!2.88e-09!172;CL:0000084!3.34e-09!25;CL:0000827!3.34e-09!25;CL:0000012!5.44e-09!682;CL:0000144!2.15e-08!625;CL:0000548!5.74e-08!679;CL:0000004!5.74e-08!679;CL:0000255!5.74e-08!679;CL:0000236!7.55e-08!14;CL:0002032!8.49e-08!165;CL:0000837!8.49e-08!165;CL:0000003!9.14e-08!722;CL:0000625!3.03e-07!11;CL:0002371!9.63e-07!591 | |ontology_enrichment_celltype=CL:0000542!2.23e-20!53;CL:0000051!2.23e-20!53;CL:0000838!5.38e-20!52;CL:0002087!5.41e-15!119;CL:0000738!2.55e-13!140;CL:0002031!6.40e-13!124;CL:0000945!1.31e-10!24;CL:0000826!1.31e-10!24;CL:0000791!7.38e-10!18;CL:0000789!7.38e-10!18;CL:0002420!7.38e-10!18;CL:0002419!7.38e-10!18;CL:0000790!7.38e-10!18;CL:0000988!1.58e-09!182;CL:0000037!2.88e-09!172;CL:0000566!2.88e-09!172;CL:0000084!3.34e-09!25;CL:0000827!3.34e-09!25;CL:0000012!5.44e-09!682;CL:0000144!2.15e-08!625;CL:0000548!5.74e-08!679;CL:0000004!5.74e-08!679;CL:0000255!5.74e-08!679;CL:0000236!7.55e-08!14;CL:0002032!8.49e-08!165;CL:0000837!8.49e-08!165;CL:0000003!9.14e-08!722;CL:0000625!3.03e-07!11;CL:0002371!9.63e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000542;7.49e-13;53!CL:0000945;1.19e-10;24!CL:0000791;7.32e-10;18!CL:0000789;7.32e-10;18!CL:0002419;7.32e-10;18!CL:0000084;3.28e-09;25!CL:0000236;5.14e-09;13!CL:0000625;3.04e-07;11!CL:0002087;7.80e-07;104 | |ontology_enrichment_celltype_v019=CL:0000542;7.49e-13;53!CL:0000945;1.19e-10;24!CL:0000791;7.32e-10;18!CL:0000789;7.32e-10;18!CL:0002419;7.32e-10;18!CL:0000084;3.28e-09;25!CL:0000236;5.14e-09;13!CL:0000625;3.04e-07;11!CL:0002087;7.80e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.23e-20,53;CL:0000051,2.23e-20,53;CL:0000838,5.38e-20,52;CL:0002087,2.44e-15,115;CL:0000738,1.46e-13,136;CL:0002031,3.40e-13,120;CL:0000945,1.31e-10,24;CL:0000826,1.31e-10,24;CL:0000791,7.38e-10,18;CL:0000789,7.38e-10,18;CL:0002420,7.38e-10,18;CL:0002419,7.38e-10,18;CL:0000790,7.38e-10,18;CL:0000988,9.25e-10,177;CL:0000037,2.23e-09,168;CL:0000084,3.34e-09,25;CL:0000827,3.34e-09,25;CL:0002032,6.83e-08,161;CL:0000837,6.83e-08,161;CL:0000236,7.55e-08,14;CL:0000625,3.03e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;7.49e-13;53!CL:0000790;7.32e-10;18 | |ontology_enrichment_development_v019=CL:0000051;7.49e-13;53!CL:0000790;7.32e-10;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p2@RPL15 | |short_description=p2@RPL15 | ||
}} | }} |
Latest revision as of 19:48, 17 September 2015
Short description: | p2@RPL15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPL15_5end |
Coexpression cluster: | C527_CD4_CD8_CD19_CD34_CD133_skeletal_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000412097, ENST00000415719, ENST00000435882, ENST00000465786, ENST00000490223, ENST00000510788, uc003ccn.2, uc003cco.2, uc003ccp.2, uc011awi.1, uc011awj.1_5end |
EntrezGene: | RPL15 |
HGNC: | 10306 |
UniProt: | E7ENU7P61313Q642I1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.23e-20 | 53 |
common lymphoid progenitor | 2.23e-20 | 53 |
lymphoid lineage restricted progenitor cell | 5.38e-20 | 52 |
nongranular leukocyte | 2.44e-15 | 115 |
leukocyte | 1.46e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 3.40e-13 | 120 |
lymphocyte of B lineage | 1.31e-10 | 24 |
pro-B cell | 1.31e-10 | 24 |
mature alpha-beta T cell | 7.38e-10 | 18 |
alpha-beta T cell | 7.38e-10 | 18 |
immature T cell | 7.38e-10 | 18 |
mature T cell | 7.38e-10 | 18 |
immature alpha-beta T cell | 7.38e-10 | 18 |
hematopoietic cell | 9.25e-10 | 177 |
hematopoietic stem cell | 2.23e-09 | 168 |
T cell | 3.34e-09 | 25 |
pro-T cell | 3.34e-09 | 25 |
hematopoietic oligopotent progenitor cell | 6.83e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.83e-08 | 161 |
B cell | 7.55e-08 | 14 |
CD8-positive, alpha-beta T cell | 3.03e-07 | 11 |