FFCP PHASE1:Hg19::chr1:22215192..22215216,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:22215192..22215216,-
|short_description=p11@HSPG2
|description=CAGE_peak_11_at_HSPG2_5end
|association_with_transcript=0bp_to_ENST00000374673_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3339 | |EntrezGene=3339 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5273 | |HGNC=5273 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000374673_5end | |||
|cluster_id=chr1:22215192..22215216,- | |||
|description=CAGE_peak_11_at_HSPG2_5end | |||
|id=chr1:22215192..22215216,- | |||
|ontology_enrichment_celltype=CL:0000071!2.80e-09!18;CL:0002546!2.80e-09!18 | |||
|ontology_enrichment_celltype_v019=CL:0002595;1.25e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,1.01e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.57e-11;1!UBERON:0009143;9.96e-11;1!UBERON:0004874;9.96e-11;1!UBERON:0006603;1.11e-08;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001981!2.56e-14!60;UBERON:0007500!2.56e-14!60;UBERON:0004537!2.56e-14!60;UBERON:0006965!2.56e-14!60;UBERON:0004872!3.71e-14!84;UBERON:0001637!4.29e-12!42;UBERON:0003509!4.29e-12!42;UBERON:0004572!4.29e-12!42;UBERON:0000055!2.19e-11!69;UBERON:0002049!1.02e-09!79;UBERON:0007798!1.02e-09!79;UBERON:0003914!1.76e-09!118;UBERON:0001986!2.80e-09!18;UBERON:0004638!2.80e-09!18;UBERON:0004852!2.80e-09!18;UBERON:0001009!3.21e-08!113;UBERON:0004573!5.36e-08!33;UBERON:0004571!5.36e-08!33;UBERON:0004535!5.77e-08!110;UBERON:0006914!3.51e-07!25;UBERON:0000487!4.21e-07!22;UBERON:0000490!7.16e-07!138;UBERON:0002385!9.82e-07!63;UBERON:0001015!9.82e-07!63;UBERON:0000383!9.82e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;3.24e-11;1!UBERON:0000989;9.96e-11;1!UBERON:0002146;9.96e-11;1!UBERON:0008811;9.96e-11;1!UBERON:0005623;9.96e-11;1!UBERON:0003834;1.25e-08;5!UBERON:0001533;1.25e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,3.08e-11,1;UBERON:0000989,6.14e-11,1;UBERON:0008811,6.14e-11,1;UBERON:0006258,6.14e-11,1;UBERON:0005876,6.14e-11,1;UBERON:0004874,6.14e-11,1;UBERON:0002146,1.33e-10,1;UBERON:0005623,1.33e-10,1;UBERON:0003834,1.01e-08,5;UBERON:0001533,1.01e-08,5;UBERON:0007500,3.76e-07,59;UBERON:0001981,3.76e-07,59;UBERON:0004537,3.76e-07,59;UBERON:0006965,3.76e-07,59;UBERON:0007023,7.30e-07,114 | |||
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| ||
|short_description=p11@HSPG2 | |||
}} | }} |
Latest revision as of 19:43, 15 September 2015
Short description: | p11@HSPG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_HSPG2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000374673_5end |
EntrezGene: | HSPG2 |
HGNC: | 5273 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
epididymis | 3.08e-11 | 1 |
penis | 6.14e-11 | 1 |
intromittent organ | 6.14e-11 | 1 |
lateral plate mesenchyme | 6.14e-11 | 1 |
undifferentiated genital tubercle | 6.14e-11 | 1 |
somatopleure | 6.14e-11 | 1 |
pulmonary valve | 1.33e-10 | 1 |
semi-lunar valve | 1.33e-10 | 1 |
thoracic segment blood vessel | 1.01e-08 | 5 |
subclavian artery | 1.01e-08 | 5 |
epithelial tube open at both ends | 3.76e-07 | 59 |
blood vessel | 3.76e-07 | 59 |
blood vasculature | 3.76e-07 | 59 |
vascular cord | 3.76e-07 | 59 |
adult organism | 7.30e-07 | 114 |