FFCP PHASE1:Hg19::chr2:113999397..113999413,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7849 | |EntrezGene=7849 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8622 | |HGNC=8622 | ||
|TSSclassifier=strong | |||
|UniProt=G3V463 | |UniProt=G3V463 | ||
|association_with_transcript=-41bp_to_ENST00000497038_5end | |association_with_transcript=-41bp_to_ENST00000497038_5end | ||
|cluster_id=chr2:113999397..113999413,- | |||
|coexpression_cluster_id=C67 | |coexpression_cluster_id=C67 | ||
|description=CAGE_peak_17_at_PAX8_5end | |description=CAGE_peak_17_at_PAX8_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002194!3.39e-18!63;CL:0000576!3.39e-18!63;CL:0000040!3.39e-18!63;CL:0000559!3.39e-18!63;CL:0002009!1.88e-17!65;CL:0000839!8.93e-16!70;CL:0000557!1.81e-15!71;CL:0000766!4.65e-14!76;CL:0000235!3.45e-13!10;CL:0002619!2.69e-10!3;CL:0000860!5.27e-08!45;CL:0000763!1.03e-07!112;CL:0000049!1.03e-07!112;CL:0002087!6.05e-07!119 | |ontology_enrichment_celltype=CL:0002194!3.39e-18!63;CL:0000576!3.39e-18!63;CL:0000040!3.39e-18!63;CL:0000559!3.39e-18!63;CL:0002009!1.88e-17!65;CL:0000839!8.93e-16!70;CL:0000557!1.81e-15!71;CL:0000766!4.65e-14!76;CL:0000235!3.45e-13!10;CL:0002619!2.69e-10!3;CL:0000860!5.27e-08!45;CL:0000763!1.03e-07!112;CL:0000049!1.03e-07!112;CL:0002087!6.05e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002619;2.28e-85;3!CL:0000576;2.21e-12;48!CL:0000473;8.13e-08;39!CL:0000234;8.13e-08;39!CL:0000115;1.83e-07;36!CL:0000766;2.54e-07;69!CL:0002537;6.39e-07;5 | |ontology_enrichment_celltype_v019=CL:0002619;2.28e-85;3!CL:0000576;2.21e-12;48!CL:0000473;8.13e-08;39!CL:0000234;8.13e-08;39!CL:0000115;1.83e-07;36!CL:0000766;2.54e-07;69!CL:0002537;6.39e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002619,2.28e-85,3;CL:0002194,3.02e-17,59;CL:0000576,3.02e-17,59;CL:0000040,3.02e-17,59;CL:0000559,3.02e-17,59;CL:0002009,1.06e-16,61;CL:0000839,1.77e-15,66;CL:0000557,2.96e-15,67;CL:0000766,3.14e-14,72;CL:0000763,1.33e-09,108;CL:0000049,1.33e-09,108;CL:0002087,4.92e-09,115;CL:0002031,1.15e-08,120;CL:0000115,7.59e-08,36;CL:0000738,1.14e-07,136;CL:0002537,6.77e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.05e-14!80;UBERON:0001474!5.62e-13!86;UBERON:0004765!3.77e-10!101;UBERON:0001434!3.77e-10!101;UBERON:0002390!5.41e-10!102;UBERON:0003061!5.41e-10!102;UBERON:0002193!1.40e-08!112;UBERON:0002405!3.32e-08!115;UBERON:0000062!7.49e-07!511 | |ontology_enrichment_uberon=UBERON:0002371!2.05e-14!80;UBERON:0001474!5.62e-13!86;UBERON:0004765!3.77e-10!101;UBERON:0001434!3.77e-10!101;UBERON:0002390!5.41e-10!102;UBERON:0003061!5.41e-10!102;UBERON:0002193!1.40e-08!112;UBERON:0002405!3.32e-08!115;UBERON:0000062!7.49e-07!511 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.67e-13,76;UBERON:0001474,1.51e-12,82;UBERON:0004765,1.83e-11,90;UBERON:0002405,4.18e-11,93;UBERON:0002390,1.48e-10,98;UBERON:0003061,1.48e-10,98;UBERON:0001434,2.38e-10,100;UBERON:0002193,1.33e-09,108;UBERON:0003081,5.76e-07,203 | |||
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| ||
|short_description=p17@PAX8 | |short_description=p17@PAX8 | ||
}} | }} |
Latest revision as of 13:08, 16 September 2015
Short description: | p17@PAX8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_PAX8_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | -41bp_to_ENST00000497038_5end |
EntrezGene: | PAX8 |
HGNC: | 8622 |
UniProt: | G3V463 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 2.28e-85 | 3 |
monopoietic cell | 3.02e-17 | 59 |
monocyte | 3.02e-17 | 59 |
monoblast | 3.02e-17 | 59 |
promonocyte | 3.02e-17 | 59 |
macrophage dendritic cell progenitor | 1.06e-16 | 61 |
myeloid lineage restricted progenitor cell | 1.77e-15 | 66 |
granulocyte monocyte progenitor cell | 2.96e-15 | 67 |
myeloid leukocyte | 3.14e-14 | 72 |
myeloid cell | 1.33e-09 | 108 |
common myeloid progenitor | 1.33e-09 | 108 |
nongranular leukocyte | 4.92e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.15e-08 | 120 |
endothelial cell | 7.59e-08 | 36 |
leukocyte | 1.14e-07 | 136 |
amnion mesenchymal stem cell | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.67e-13 | 76 |
bone element | 1.51e-12 | 82 |
skeletal element | 1.83e-11 | 90 |
immune system | 4.18e-11 | 93 |
hematopoietic system | 1.48e-10 | 98 |
blood island | 1.48e-10 | 98 |
skeletal system | 2.38e-10 | 100 |
hemolymphoid system | 1.33e-09 | 108 |
lateral plate mesoderm | 5.76e-07 | 203 |