FFCP PHASE1:Hg19::chr1:221220442..221220467,+: Difference between revisions
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|id=chr1:221220442..221220467,+
|short_description=p@chr1:221220442..221220467,+
|description=CAGE_peak_at_chr1:221220442..221220467,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:221220442..221220467,+ | |||
|coexpression_cluster_id=C651 | |||
|description=CAGE_peak_at_chr1:221220442..221220467,+ | |||
|id=chr1:221220442..221220467,+ | |||
|ontology_enrichment_celltype=CL:0000945!3.04e-72!24;CL:0000826!3.04e-72!24;CL:0000542!5.52e-43!53;CL:0000051!5.52e-43!53;CL:0000236!8.47e-42!14;CL:0000838!3.90e-40!52;CL:0000738!9.09e-28!140;CL:0002087!1.70e-25!119;CL:0002031!4.85e-24!124;CL:0002032!2.36e-22!165;CL:0000837!2.36e-22!165;CL:0000037!4.04e-21!172;CL:0000566!4.04e-21!172;CL:0000988!1.61e-19!182;CL:0000990!4.24e-16!8;CL:0000453!6.41e-14!5;CL:0000451!4.69e-13!10;CL:0000785!3.53e-09!2;CL:0000955!3.53e-09!2;CL:0000818!3.53e-09!2;CL:0000954!3.53e-09!2;CL:0000816!3.53e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.40e-85;24!CL:0000236;7.66e-63;13!CL:0000542;1.09e-28;53!CL:0000453;4.47e-16;5!CL:0000946;1.99e-09;1!CL:0000786;1.99e-09;1!CL:0000990;3.65e-09;8!CL:0000451;1.40e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.33e-85,24;CL:0000826,1.33e-85,24;CL:0000236,2.42e-70,14;CL:0000542,2.18e-42,53;CL:0000051,2.18e-42,53;CL:0000838,4.23e-38,52;CL:0000738,4.06e-21,136;CL:0002087,8.58e-18,115;CL:0002032,2.41e-17,161;CL:0000837,2.41e-17,161;CL:0000037,1.74e-16,168;CL:0000453,4.70e-16,5;CL:0000988,1.76e-15,177;CL:0002031,8.49e-15,120;CL:0000946,2.08e-09,1;CL:0000786,2.08e-09,1;CL:0000980,2.08e-09,1;CL:0000990,3.76e-09,8;CL:0000451,1.43e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000051;1.09e-28;53!UBERON:0001045;1.99e-09;1 | |||
|ontology_enrichment_disease=DOID:0060058!1.35e-24!10;DOID:2531!2.49e-07!51;DOID:0060083!2.49e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:12603;1.01e-09;1!DOID:0060058;4.11e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,7.50e-10,1;DOID:0060058,4.11e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!4.33e-14!7;UBERON:0002106!3.53e-13!3;UBERON:0004854!3.53e-13!3;UBERON:0009034!3.53e-13!3;UBERON:0002095!3.53e-13!3;UBERON:0004782!3.53e-13!3;UBERON:0003281!3.53e-13!3;UBERON:0009664!3.53e-13!3;UBERON:0002296!3.53e-13!3;UBERON:0005602!3.53e-13!3;UBERON:0001179!3.53e-13!3;UBERON:0006293!3.53e-13!3;UBERON:0002193!3.61e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;3.47e-12;3!UBERON:0002372;1.99e-09;1!UBERON:0001154;1.99e-09;1!UBERON:0001153;1.99e-09;1!UBERON:0009854;1.99e-09;1!UBERON:0001961;1.99e-09;1!UBERON:0001744;1.99e-09;1!UBERON:0001042;1.99e-09;1!UBERON:0001735;1.99e-09;1!UBERON:0004177;1.17e-07;5!UBERON:0005057;1.17e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.77e-12,3;UBERON:0004854,3.77e-12,3;UBERON:0009034,3.77e-12,3;UBERON:0002095,3.77e-12,3;UBERON:0004782,3.77e-12,3;UBERON:0003281,3.77e-12,3;UBERON:0009664,3.77e-12,3;UBERON:0002296,3.77e-12,3;UBERON:0005602,3.77e-12,3;UBERON:0001179,3.77e-12,3;UBERON:0006293,3.77e-12,3;UBERON:0002372,1.76e-09,1;UBERON:0001961,1.76e-09,1;UBERON:0001744,1.76e-09,1;UBERON:0001735,1.76e-09,1;UBERON:0001154,2.67e-09,1;UBERON:0001153,2.67e-09,1;UBERON:0001045,2.67e-09,1 | |||
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| ||
|short_description=p@chr1:221220442..221220467,+ | |||
}} | }} |
Latest revision as of 04:08, 28 July 2015
Short description: | p@chr1:221220442..221220467, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:221220442..221220467, + |
Coexpression cluster: | C651_splenic_CD19_B_xeroderma_plasma_Burkitt_lymphoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.33e-85 | 24 |
pro-B cell | 1.33e-85 | 24 |
B cell | 2.42e-70 | 14 |
lymphocyte | 2.18e-42 | 53 |
common lymphoid progenitor | 2.18e-42 | 53 |
lymphoid lineage restricted progenitor cell | 4.23e-38 | 52 |
leukocyte | 4.06e-21 | 136 |
nongranular leukocyte | 8.58e-18 | 115 |
hematopoietic oligopotent progenitor cell | 2.41e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.41e-17 | 161 |
hematopoietic stem cell | 1.74e-16 | 168 |
Langerhans cell | 4.70e-16 | 5 |
hematopoietic cell | 1.76e-15 | 177 |
hematopoietic lineage restricted progenitor cell | 8.49e-15 | 120 |
antibody secreting cell | 2.08e-09 | 1 |
plasma cell | 2.08e-09 | 1 |
plasmablast | 2.08e-09 | 1 |
conventional dendritic cell | 3.76e-09 | 8 |
dendritic cell | 1.43e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.77e-12 | 3 |
gastrointestinal system mesentery | 3.77e-12 | 3 |
stomach region | 3.77e-12 | 3 |
mesentery | 3.77e-12 | 3 |
gastrointestinal system serosa | 3.77e-12 | 3 |
mesentery of stomach | 3.77e-12 | 3 |
gut mesentery | 3.77e-12 | 3 |
dorsal mesentery | 3.77e-12 | 3 |
dorsal mesogastrium | 3.77e-12 | 3 |
peritoneal cavity | 3.77e-12 | 3 |
spleen primordium | 3.77e-12 | 3 |
tonsil | 1.76e-09 | 1 |
mucosa-associated lymphoid tissue | 1.76e-09 | 1 |
lymphoid tissue | 1.76e-09 | 1 |
tonsillar ring | 1.76e-09 | 1 |
vermiform appendix | 2.67e-09 | 1 |
caecum | 2.67e-09 | 1 |
midgut | 2.67e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 7.50e-10 | 1 |
lymphoma | 4.11e-08 | 10 |