FFCP PHASE1:Hg19::chr19:36443560..36443561,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:36443560..36443561,+ | |||
|coexpression_cluster_id=C358 | |coexpression_cluster_id=C358 | ||
|description=CAGE_peak_at_chr19:36443560..36443561,+ | |description=CAGE_peak_at_chr19:36443560..36443561,+ | ||
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|ontology_enrichment_celltype=CL:0002127!1.54e-07!1;CL:0000914!1.54e-07!1;CL:0000911!1.54e-07!1;CL:0000814!1.54e-07!1;CL:0002042!1.54e-07!1;CL:0002039!1.54e-07!1;CL:0002040!1.54e-07!1;CL:0002041!1.54e-07!1 | |ontology_enrichment_celltype=CL:0002127!1.54e-07!1;CL:0000914!1.54e-07!1;CL:0000911!1.54e-07!1;CL:0000814!1.54e-07!1;CL:0002042!1.54e-07!1;CL:0002039!1.54e-07!1;CL:0002040!1.54e-07!1;CL:0002041!1.54e-07!1 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.27e-23;3 | |ontology_enrichment_development_v019=UBERON:0006215;3.27e-23;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr19:36443560..36443561,+ | |short_description=p@chr19:36443560..36443561,+ | ||
}} | }} |
Latest revision as of 06:57, 26 July 2015
Short description: | p@chr19:36443560..36443561, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:36443560..36443561, + |
Coexpression cluster: | C358_cerebellum_middle_occipital_parietal_pineal_medial_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.83e-14 | 5 |
cerebellum | 2.19e-12 | 6 |
rhombic lip | 2.19e-12 | 6 |
regional part of metencephalon | 1.04e-08 | 9 |
metencephalon | 1.04e-08 | 9 |
future metencephalon | 1.04e-08 | 9 |
pancreas | 6.13e-08 | 10 |
segmental subdivision of hindbrain | 7.48e-07 | 12 |
hindbrain | 7.48e-07 | 12 |
presumptive hindbrain | 7.48e-07 | 12 |