FFCP PHASE1:Hg19::chr4:139010162..139010169,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=641364 | |EntrezGene=641364 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000510767,NR_038380_5end | |association_with_transcript=0bp_to_ENST00000510767,NR_038380_5end | ||
|cluster_id=chr4:139010162..139010169,+ | |||
|coexpression_cluster_id=C321 | |coexpression_cluster_id=C321 | ||
|description=CAGE_peak_1_at_LOC641364_5end | |description=CAGE_peak_1_at_LOC641364_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000214!4.52e-08!3 | |ontology_enrichment_celltype=CL:0000214!4.52e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000214;4.27e-34;3!CL:0000153;2.19e-12;9!CL:0000447;2.19e-12;9!CL:0000327;5.55e-08;15 | |ontology_enrichment_celltype_v019=CL:0000214;4.27e-34;3!CL:0000153;2.19e-12;9!CL:0000447;2.19e-12;9!CL:0000327;5.55e-08;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000214,4.27e-34,3;CL:0000153,2.19e-12,9;CL:0000447,2.19e-12,9;CL:0000327,5.55e-08,15 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.02e-11;10!UBERON:0005564;3.02e-11;10 | |ontology_enrichment_development_v019=UBERON:0009117;3.02e-11;10!UBERON:0005564;3.02e-11;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!5.13e-23!8;UBERON:0003135!6.02e-17!11;UBERON:0000991!3.45e-09!21;UBERON:0009196!3.45e-09!21;UBERON:0009117!3.45e-09!21;UBERON:0005564!3.45e-09!21;UBERON:0004176!8.47e-09!22;UBERON:0003101!8.47e-09!22;UBERON:0000079!8.47e-09!22;UBERON:0006915!4.52e-08!3;UBERON:0002018!4.52e-08!3;UBERON:0002217!4.52e-08!3;UBERON:0007616!4.52e-08!3;UBERON:0003133!5.93e-07!48;UBERON:0004458!7.05e-07!49 | |ontology_enrichment_uberon=UBERON:0000473!5.13e-23!8;UBERON:0003135!6.02e-17!11;UBERON:0000991!3.45e-09!21;UBERON:0009196!3.45e-09!21;UBERON:0009117!3.45e-09!21;UBERON:0005564!3.45e-09!21;UBERON:0004176!8.47e-09!22;UBERON:0003101!8.47e-09!22;UBERON:0000079!8.47e-09!22;UBERON:0006915!4.52e-08!3;UBERON:0002018!4.52e-08!3;UBERON:0002217!4.52e-08!3;UBERON:0007616!4.52e-08!3;UBERON:0003133!5.93e-07!48;UBERON:0004458!7.05e-07!49 | ||
|ontology_enrichment_uberon_v019=UBERON:0006915;4.27e-34;3!UBERON:0007616;4.27e-34;3!UBERON:0002217;4.27e-34;3!UBERON:0002018;4.27e-34;3!UBERON:0004905;9.39e-14;8!UBERON:0000982;9.39e-14;8!UBERON:0004770;9.39e-14;8!UBERON:0000473;1.07e-13;8!UBERON:0004457;2.19e-12;9!UBERON:0000042;2.19e-12;9!UBERON:0003135;2.37e-10;11!UBERON:0000486;1.22e-09;12 | |ontology_enrichment_uberon_v019=UBERON:0006915;4.27e-34;3!UBERON:0007616;4.27e-34;3!UBERON:0002217;4.27e-34;3!UBERON:0002018;4.27e-34;3!UBERON:0004905;9.39e-14;8!UBERON:0000982;9.39e-14;8!UBERON:0004770;9.39e-14;8!UBERON:0000473;1.07e-13;8!UBERON:0004457;2.19e-12;9!UBERON:0000042;2.19e-12;9!UBERON:0003135;2.37e-10;11!UBERON:0000486;1.22e-09;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,4.27e-34,3;UBERON:0007616,4.27e-34,3;UBERON:0002217,4.27e-34,3;UBERON:0002018,4.27e-34,3;UBERON:0004905,9.39e-14,8;UBERON:0000982,9.39e-14,8;UBERON:0004770,9.39e-14,8;UBERON:0000473,1.07e-13,8;UBERON:0003135,2.37e-10,11;UBERON:0004457,1.22e-09,12;UBERON:0000042,1.22e-09,12;UBERON:0004458,2.38e-09,49 | |||
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|short_description=p1@LOC641364 | |short_description=p1@LOC641364 | ||
}} | }} |
Latest revision as of 05:24, 25 September 2015
Short description: | p1@LOC641364 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC641364_5end |
Coexpression cluster: | C321_synovial_anaplastic_maxillary_glassy_keratoacanthoma_rhabdomyosarcoma_small |
Association with transcript: | 0bp_to_ENST00000510767, NR_038380_5end |
EntrezGene: | LOC641364 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 4.27e-34 | 3 |
GAG secreting cell | 2.19e-12 | 9 |
carbohydrate secreting cell | 2.19e-12 | 9 |
extracellular matrix secreting cell | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 4.27e-34 | 3 |
layer of synovial tissue | 4.27e-34 | 3 |
synovial joint | 4.27e-34 | 3 |
synovial membrane of synovial joint | 4.27e-34 | 3 |
articulation | 9.39e-14 | 8 |
skeletal joint | 9.39e-14 | 8 |
articular system | 9.39e-14 | 8 |
testis | 1.07e-13 | 8 |
male reproductive organ | 2.37e-10 | 11 |
cavity lining | 1.22e-09 | 12 |
serous membrane | 1.22e-09 | 12 |
body cavity or lining | 2.38e-09 | 49 |