FFCP PHASE1:Hg19::chr1:20915737..20915741,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:20915737..20915741,+
|short_description=p4@CDA
|description=CAGE_peak_4_at_CDA_5end
|association_with_transcript=158bp_to_ENST00000461985_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=978 | |EntrezGene=978 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1712 | |HGNC=1712 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=158bp_to_ENST00000461985_5end | |||
|cluster_id=chr1:20915737..20915741,+ | |||
|description=CAGE_peak_4_at_CDA_5end | |||
|id=chr1:20915737..20915741,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.81e-19!76;CL:0002194!7.31e-18!63;CL:0000576!7.31e-18!63;CL:0000040!7.31e-18!63;CL:0000559!7.31e-18!63;CL:0000860!2.06e-17!45;CL:0002009!5.49e-17!65;CL:0000839!4.99e-15!70;CL:0000557!1.13e-14!71;CL:0002057!1.93e-14!42;CL:0000763!5.93e-10!112;CL:0000049!5.93e-10!112;CL:0000738!3.15e-09!140;CL:0000235!4.83e-09!10;CL:0002087!2.47e-08!119;CL:0000063!8.26e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000771;1.19e-14;2!CL:0000235;1.34e-10;6!CL:0002541;5.86e-10;3!CL:0000094;2.40e-08;8!CL:0002379;2.70e-08;1!CL:0000244;1.75e-07;4!CL:0000731;1.75e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,1.20e-14,2;CL:0000235,2.13e-10,6;CL:0002541,4.58e-10,3;CL:0002379,2.19e-08,1;CL:0000094,2.40e-08,8;CL:0000244,1.18e-07,4;CL:0000731,1.18e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.90e-11;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;2.70e-08;1!DOID:3565;2.70e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,2.19e-08,1;DOID:3565,2.19e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.55e-16!102;UBERON:0003061!2.55e-16!102;UBERON:0001737!1.15e-14!9;UBERON:0002371!8.90e-14!80;UBERON:0002193!1.12e-13!112;UBERON:0001474!4.41e-12!86;UBERON:0004765!6.60e-12!101;UBERON:0001434!6.60e-12!101;UBERON:0001557!1.78e-09!19;UBERON:0002405!4.83e-09!115;UBERON:0000926!8.64e-09!448;UBERON:0004120!8.64e-09!448;UBERON:0006603!8.64e-09!448;UBERON:0002204!1.73e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.18e-36;9!UBERON:0001557;2.18e-36;9!UBERON:0003124;5.86e-10;3!UBERON:0000920;5.86e-10;3!UBERON:0000072;6.49e-08;37!UBERON:0000178;2.29e-07;15!UBERON:0000179;2.29e-07;15!UBERON:0000463;2.29e-07;15!UBERON:0000065;7.09e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.33e-36,9;UBERON:0001557,6.38e-17,19;UBERON:0000920,4.58e-10,3;UBERON:0003124,2.82e-09,7;UBERON:0008947,4.95e-08,38;UBERON:0003258,4.95e-08,38;UBERON:0000178,2.54e-07,15;UBERON:0000179,2.54e-07,15;UBERON:0000463,2.54e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0.6024118375565,0,0,0,0,0,0.200544447470142,0,0,0,0,0.436194716338694,0.377875943688809,0.727752183563449,0,0.411167888021826,0.309706370895104,0,0,0.709446689665756,0.344745680736619,0,0,0.188242339542605,0,0,0.918251677112708,0,1.91801137739712,0.659702600373432,0.797854630486527,0,0.290209238628584,0,0,1.00499466102697,0,0.65156653411535,0.605399502633369,0,0.632924774881769,0.633765858935825,0.425208599930087,0,0.561643155732475,0.300353785683013,0,0.285012743741249,0.59675003159727,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01392563272577,0,0,0,0,0,0,0,0,0,0,0.531831842075461,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0.121973706129595,0,0.348581828608555,0,0.252320850875628,0,0,0,0,1.39310378409594,0.721879481669586,2.36613600079688,2.86593973132773,0.723033089650446,3.97058301836618,0.871517776369625,2.13543557199987,2.56179485504312,1.56977172100277,1.92373578473195,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0,0,0,0,0.402115889646523,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,1.0404181360211,0,0.839910640994298,0.425325291727159,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,2.43247561282381,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0.749007023947182,11.966458368161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.2942852049117,0.106727557803444,0,1.66435439510497,0,0,0,0.280660094433074,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0,0.40101294060657,0,0,0.546273504020151,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.170453254832202,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0.487426979262569,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0.670302275535787,0,0,0.43050537267123,1.68471475667626,1.7737206141467,0.229723400206959,0.507447609232169,0,1.13929437434833,0,0,0,0.540031437238115,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449341755736634,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,1.5950057986596,0.183195186803725,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0.171986032471617,0.774050650312681,0.584714536689484,0.985385484638511,0.193978032976839,0,0,0.137041924646751,0.397429223405979,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0.321506296930038,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08599920350743,0.864221491201268,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82318983637806,0,0,0,0,0,0,0.50313580350515,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.530067437837643,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,0,0.432626562123789,0,0,0,0,0,0.735159196278759,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.653150243690884,0,0,0,0,0,0.106727345877715,0,0,0,0,0.813792356631477,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0.6024118375565,0,0,0,0,0,0.200544447470142,0,0,0,0,0.436194716338694,0.377875943688809,0.727752183563449,0,0.411167888021826,0.309706370895104,0,0,0.709446689665756,0.344745680736619,0,0,0.188242339542605,0,0,0.918251677112708,0,1.91801137739712,0.659702600373432,0.797854630486527,0,0.290209238628584,0,0,1.00499466102697,0,0.65156653411535,0.605399502633369,0,0.632924774881769,0.633765858935825,0.425208599930087,0,0.561643155732475,0.300353785683013,0,0.285012743741249,0.59675003159727,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01392563272577,0,0,0,0,0,0,0,0,0,0,0.531831842075461,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0.121973706129595,0,0.348581828608555,0,0.252320850875628,0,0,0,0,1.39310378409594,0.721879481669586,2.36613600079688,2.86593973132773,0.723033089650446,3.97058301836618,0.871517776369625,2.13543557199987,2.56179485504312,1.56977172100277,1.92373578473195,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0,0,0,0,0.402115889646523,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,1.0404181360211,0,0.839910640994298,0.425325291727159,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,2.43247561282381,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0.749007023947182,11.966458368161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.2942852049117,0.106727557803444,0,1.66435439510497,0,0,0,0.280660094433074,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0,0.40101294060657,0,0,0.546273504020151,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.170453254832202,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0.487426979262569,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0.670302275535787,0,0,0.43050537267123,1.68471475667626,1.7737206141467,0.229723400206959,0.507447609232169,0,1.13929437434833,0,0,0,0.540031437238115,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449341755736634,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,1.5950057986596,0.183195186803725,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0.171986032471617,0.774050650312681,0.584714536689484,0.985385484638511,0.193978032976839,0,0,0.137041924646751,0.397429223405979,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0.321506296930038,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08599920350743,0.864221491201268,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82318983637806,0,0,0,0,0,0,0.50313580350515,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.530067437837643,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,0,0.432626562123789,0,0,0,0,0,0.735159196278759,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.653150243690884,0,0,0,0,0,0.106727345877715,0,0,0,0,0.813792356631477,0,0,0 | ||
|short_description=p4@CDA | |||
}} | }} |
Latest revision as of 18:32, 24 September 2015
Short description: | p4@CDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDA_5end |
Coexpression cluster: | NA |
Association with transcript: | 158bp_to_ENST00000461985_5end |
EntrezGene: | CDA |
HGNC: | 1712 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 1.20e-14 | 2 |
macrophage | 2.13e-10 | 6 |
chorionic membrane mesenchymal stem cell | 4.58e-10 | 3 |
meningothelial cell | 2.19e-08 | 1 |
granulocyte | 2.40e-08 | 8 |
transitional epithelial cell | 1.18e-07 | 4 |
urothelial cell | 1.18e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.33e-36 | 9 |
upper respiratory tract | 6.38e-17 | 19 |
egg chorion | 4.58e-10 | 3 |
chorion | 2.82e-09 | 7 |
respiratory primordium | 4.95e-08 | 38 |
endoderm of foregut | 4.95e-08 | 38 |
blood | 2.54e-07 | 15 |
haemolymphatic fluid | 2.54e-07 | 15 |
organism substance | 2.54e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 2.19e-08 | 1 |
meningioma | 2.19e-08 | 1 |