FFCP PHASE1:Hg19::chr6:56112323..56112385,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81578 | |EntrezGene=81578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17025 | |HGNC=17025 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZK2,Q96P44 | |UniProt=F5GZK2,Q96P44 | ||
|association_with_transcript=0bp_to_ENST00000370811,ENST00000535941,NM_030820,uc003pcs.2,uc003pct.1,uc011dxi.1_5end | |association_with_transcript=0bp_to_ENST00000370811,ENST00000535941,NM_030820,uc003pcs.2,uc003pct.1,uc011dxi.1_5end | ||
|cluster_id=chr6:56112323..56112385,- | |||
|coexpression_cluster_id=C4618 | |coexpression_cluster_id=C4618 | ||
|description=CAGE_peak_1_at_COL21A1_5end | |description=CAGE_peak_1_at_COL21A1_5end | ||
|id=chr6:56112323..56112385,- | |id=chr6:56112323..56112385,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.75e-09;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.17e-36!115;UBERON:0002616!1.92e-28!59;UBERON:0001049!3.95e-27!57;UBERON:0005068!3.95e-27!57;UBERON:0006241!3.95e-27!57;UBERON:0007135!3.95e-27!57;UBERON:0002346!3.57e-25!90;UBERON:0003075!1.93e-24!86;UBERON:0007284!1.93e-24!86;UBERON:0001017!4.90e-24!82;UBERON:0005743!2.38e-23!86;UBERON:0000955!9.11e-23!69;UBERON:0006238!9.11e-23!69;UBERON:0000073!1.77e-22!94;UBERON:0001016!1.77e-22!94;UBERON:0000153!1.89e-21!129;UBERON:0007811!1.89e-21!129;UBERON:0000033!7.16e-21!123;UBERON:0003080!3.88e-20!42;UBERON:0002780!1.40e-19!41;UBERON:0001890!1.40e-19!41;UBERON:0006240!1.40e-19!41;UBERON:0000924!1.30e-18!173;UBERON:0006601!1.30e-18!173;UBERON:0004121!7.70e-18!169;UBERON:0003056!1.42e-17!61;UBERON:0000475!1.32e-16!365;UBERON:0001893!4.40e-16!34;UBERON:0000481!6.67e-16!347;UBERON:0002020!7.23e-16!34;UBERON:0003528!7.23e-16!34;UBERON:0002791!1.13e-15!33;UBERON:0001869!5.54e-15!32;UBERON:0000468!2.10e-12!659;UBERON:0000956!5.72e-12!25;UBERON:0000203!5.72e-12!25;UBERON:0002619!7.76e-12!22;UBERON:0000119!1.09e-11!312;UBERON:0000483!2.73e-11!309;UBERON:0000477!3.55e-11!286;UBERON:0001950!1.39e-10!20;UBERON:0000922!2.48e-10!612;UBERON:0000062!3.18e-09!511;UBERON:0002050!3.28e-09!605;UBERON:0005423!3.28e-09!605;UBERON:0000923!7.58e-09!604;UBERON:0005291!7.58e-09!604;UBERON:0006598!7.58e-09!604;UBERON:0002532!7.58e-09!604;UBERON:0004111!2.26e-08!241;UBERON:0003076!3.84e-08!15;UBERON:0003057!3.84e-08!15;UBERON:0000064!8.92e-08!219;UBERON:0000467!2.36e-07!625;UBERON:0000480!3.14e-07!626;UBERON:0000025!9.17e-07!194 | |ontology_enrichment_uberon=UBERON:0007023!1.17e-36!115;UBERON:0002616!1.92e-28!59;UBERON:0001049!3.95e-27!57;UBERON:0005068!3.95e-27!57;UBERON:0006241!3.95e-27!57;UBERON:0007135!3.95e-27!57;UBERON:0002346!3.57e-25!90;UBERON:0003075!1.93e-24!86;UBERON:0007284!1.93e-24!86;UBERON:0001017!4.90e-24!82;UBERON:0005743!2.38e-23!86;UBERON:0000955!9.11e-23!69;UBERON:0006238!9.11e-23!69;UBERON:0000073!1.77e-22!94;UBERON:0001016!1.77e-22!94;UBERON:0000153!1.89e-21!129;UBERON:0007811!1.89e-21!129;UBERON:0000033!7.16e-21!123;UBERON:0003080!3.88e-20!42;UBERON:0002780!1.40e-19!41;UBERON:0001890!1.40e-19!41;UBERON:0006240!1.40e-19!41;UBERON:0000924!1.30e-18!173;UBERON:0006601!1.30e-18!173;UBERON:0004121!7.70e-18!169;UBERON:0003056!1.42e-17!61;UBERON:0000475!1.32e-16!365;UBERON:0001893!4.40e-16!34;UBERON:0000481!6.67e-16!347;UBERON:0002020!7.23e-16!34;UBERON:0003528!7.23e-16!34;UBERON:0002791!1.13e-15!33;UBERON:0001869!5.54e-15!32;UBERON:0000468!2.10e-12!659;UBERON:0000956!5.72e-12!25;UBERON:0000203!5.72e-12!25;UBERON:0002619!7.76e-12!22;UBERON:0000119!1.09e-11!312;UBERON:0000483!2.73e-11!309;UBERON:0000477!3.55e-11!286;UBERON:0001950!1.39e-10!20;UBERON:0000922!2.48e-10!612;UBERON:0000062!3.18e-09!511;UBERON:0002050!3.28e-09!605;UBERON:0005423!3.28e-09!605;UBERON:0000923!7.58e-09!604;UBERON:0005291!7.58e-09!604;UBERON:0006598!7.58e-09!604;UBERON:0002532!7.58e-09!604;UBERON:0004111!2.26e-08!241;UBERON:0003076!3.84e-08!15;UBERON:0003057!3.84e-08!15;UBERON:0000064!8.92e-08!219;UBERON:0000467!2.36e-07!625;UBERON:0000480!3.14e-07!626;UBERON:0000025!9.17e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.06e-16;41!UBERON:0001890;1.06e-16;41!UBERON:0000073;2.86e-16;53!UBERON:0002616;2.86e-16;53!UBERON:0001893;1.98e-15;34!UBERON:0003528;2.03e-15;34!UBERON:0002020;2.03e-15;34!UBERON:0002791;2.20e-15;32!UBERON:0001869;3.05e-15;32!UBERON:0002619;1.35e-14;22!UBERON:0001950;5.15e-13;20!UBERON:0000956;5.18e-13;25!UBERON:0000203;5.18e-13;25!UBERON:0001017;2.08e-12;75!UBERON:0000955;8.85e-12;68!UBERON:0007023;5.56e-11;114!UBERON:0001016;3.72e-10;83!UBERON:0011216;2.33e-08;132!UBERON:0000922;1.24e-07;49!UBERON:0004733;1.80e-07;12!UBERON:0002028;1.80e-07;12!UBERON:0004905;3.50e-07;8!UBERON:0000982;3.50e-07;8!UBERON:0004770;3.50e-07;8!UBERON:0002420;5.53e-07;9!UBERON:0007245;5.53e-07;9!UBERON:0010009;5.53e-07;9!UBERON:0010011;5.53e-07;9!UBERON:0000454;5.53e-07;9 | |||
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| ||
|short_description=p1@COL21A1 | |short_description=p1@COL21A1 | ||
}} | }} |
Latest revision as of 08:43, 19 September 2015
Short description: | p1@COL21A1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COL21A1_5end |
Coexpression cluster: | C4618_rectum_skeletal_Fibroblast_aorta_skin_throat_pleomorphic |
Association with transcript: | 0bp_to_ENST00000370811, ENST00000535941, NM_030820, uc003pcs.2, uc003pct.1, uc011dxi.1_5end |
EntrezGene: | COL21A1 |
HGNC: | 17025 |
UniProt: | F5GZK2Q96P44 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data