FFCP PHASE1:Hg19::chr1:207504446..207504457,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:207504446..207504457,+
|short_description=p@chr1:207504446..207504457,+
|description=CAGE_peak_at_chr1:207504446..207504457,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:207504446..207504457,+ | |||
|coexpression_cluster_id=C531 | |||
|description=CAGE_peak_at_chr1:207504446..207504457,+ | |||
|id=chr1:207504446..207504457,+ | |||
|ontology_enrichment_celltype=CL:0000860!9.56e-27!45;CL:0002057!2.12e-24!42;CL:0000766!1.85e-18!76;CL:0002009!7.12e-18!65;CL:0000557!1.51e-17!71;CL:0000839!1.26e-16!70;CL:0002194!1.26e-16!63;CL:0000576!1.26e-16!63;CL:0000040!1.26e-16!63;CL:0000559!1.26e-16!63;CL:0000763!1.54e-16!112;CL:0000049!1.54e-16!112;CL:0000738!1.50e-13!140;CL:0002032!3.92e-13!165;CL:0000837!3.92e-13!165;CL:0000037!5.07e-13!172;CL:0000566!5.07e-13!172;CL:0000988!1.53e-12!182;CL:0002031!3.81e-12!124;CL:0002087!5.98e-12!119;CL:0000063!1.15e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.22e-43;33!CL:0002057;9.22e-43;33!CL:0000473;6.03e-30;39!CL:0000234;6.03e-30;39!CL:0000576;2.36e-19;48!CL:0000766;4.08e-13;69!CL:0002087;7.46e-09;104!CL:0000771;6.79e-08;2!CL:0000763;1.06e-07;100!CL:0000738;2.53e-07;136!CL:0000094;2.66e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.88e-39,42;CL:0002057,1.88e-39,42;CL:0000473,1.03e-33,48;CL:0000234,1.03e-33,48;CL:0000766,8.62e-29,72;CL:0002009,4.84e-27,61;CL:0002194,1.09e-25,59;CL:0000576,1.09e-25,59;CL:0000040,1.09e-25,59;CL:0000559,1.09e-25,59;CL:0000557,4.51e-24,67;CL:0000839,2.41e-22,66;CL:0000738,1.72e-19,136;CL:0000763,2.24e-18,108;CL:0000049,2.24e-18,108;CL:0002031,7.21e-17,120;CL:0002087,1.79e-16,115;CL:0002032,3.62e-15,161;CL:0000837,3.62e-15,161;CL:0000037,3.42e-14,168;CL:0000988,4.70e-13,177;CL:0000771,7.44e-08,2;CL:0000094,2.72e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;6.92e-28;42!UBERON:0008947;6.12e-12;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.53e-14!80;UBERON:0001474!5.30e-13!86;UBERON:0002390!2.01e-12!102;UBERON:0003061!2.01e-12!102;UBERON:0002193!2.73e-11!112;UBERON:0004765!1.33e-10!101;UBERON:0001434!1.33e-10!101;UBERON:0001737!5.45e-09!9;UBERON:0002405!7.38e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.06e-29;9!UBERON:0001557;6.06e-29;9!UBERON:0000065;5.28e-07;44!UBERON:0000072;7.49e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.82e-29,9;UBERON:0002371,1.71e-20,76;UBERON:0001474,1.52e-18,82;UBERON:0004765,2.38e-16,90;UBERON:0002405,1.26e-15,93;UBERON:0002390,1.61e-14,98;UBERON:0003061,1.61e-14,98;UBERON:0001434,4.16e-14,100;UBERON:0001557,6.31e-13,19;UBERON:0002193,1.29e-12,108;UBERON:0008947,1.25e-08,38;UBERON:0003258,1.25e-08,38 | |||
|phase1_expression=0.726713517082227,0,0,1.0007329835313,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0.553995408531877,1.60435557976113,0.651032612147555,0,0,0,1.16318591023652,1.13362783106643,0.727752183563449,1.62700325833979,0.411167888021826,2.16794459626573,1.1507695692886,0.768482119587302,0.945928919554341,3.44745680736619,2.5819387343353,1.35426486594342,1.69418105588344,0.545812300115692,1.12361742222542,1.53041946185451,1.92557416245656,5.75403413219137,0.659702600373432,0.398927315243264,1.70489900213078,8.41606792022894,3.97169657283798,3.11411124497787,2.00998932205395,1.0429658368404,1.3031330682307,1.81619850790011,1.47311054395026,1.58231193720442,0,0.425208599930087,0.209658645508376,0.336985893439485,0,0.32145117339416,0.285012743741249,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,3.41527781465669,1.17447437874188,1.52909291250092,0,0,0,0.786839080455332,0,0.616804496998528,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0.289803085735052,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,1.15859523106239,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0.825354125820202,0.208994966536811,0,0.71153252537342,0,0,0.760272105718513,0.24406205754817,0.367663080345869,0,0.17859945656816,0,0.112611480483322,0,0,0,1.31780417436063,7.75560528296651,0,0,0.12663051166458,0,0.860509862246441,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0.245668634623536,0.206651562351531,0,0.247266929278557,0,0,0,0,0,0,0,0.45071417671979,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0.464367928031979,0,1.53798840051797,2.02301628093722,2.16909926895134,2.20587945464788,1.74303555273925,1.18635309555548,2.56179485504312,1.56977172100277,2.69323009862473,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0.352226082707465,0,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0,0.0895585227028483,0.290633938513962,0,0,0.176096868026452,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,1.06375246633948,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0.502257091432126,0,0,0,0,0,0,0.179060963239896,0,0.197030760201927,0,1.41177339907723,0,0,0,0,0,3.74503511973591,8.97484377612075,0.414415513436035,0.12269149171914,0.500170521059677,0,0.207970861530807,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0.82707210449155,0.215714200818617,0.213455115606889,0,0,0,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0.64341568457443,0,0,0,0.0821271560138091,0,0,0,0,1.10497186723076,0,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0.328014645699706,0,0.206082023295445,0,0,0,0.650060246036521,0,0.193341436584244,0,0,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.0982490410131212,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0.822724546172388,0,0,0,0,0,0.490080431962063,0.185803175125719,0,0.0711418433484141,0.159426272728822,0.199579371432817,0,0.211673582723883,0,0.280797178113459,0,0.156679895773023,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0,0,0,0.19538809540204,0.278406173895242,0,0.270455678475983,0,0,0.18714054040822,0,0,0,0,1.90995587790152,0,1.84296421259539,0,0,0,0,0,0.398495976502139,0,0,0,0.123084805461069,0.311039587661807,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0.227586896570999,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0,0,0.435753854075961,0,0.153900517007594,0.113942055847001,0.23056390438806,0.987334088507493,2.49888955420619,0.31900115973192,0.366390373607449,1.06606955203727,0,0.156980256395025,0.332423363800313,0.451191321234361,0,0,0.189753732724185,0,0.210998064528027,0,0,0,0,0.176915129006678,0,0.296521128680622,0.247127877893006,0.208843899010911,0,0,0,0,0,0.242780379534093,0,1.20990716048664,0.30607276163049,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0.694238953340524,0,0.174118413160805,0.34945333648406,0,1.9351266257817,1.09633975629278,1.56019368401098,0.290967049465258,0,0.677942222341597,0,0,0,0.391102765469606,0,0,0,0.576361668616424,0,0,0.576219191952599,0,0.942776138467182,0,0.313808538937,0,0,0,0,0,0,0.262887354279314,0.558564802544508,0,0,0.798716001995964,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,1.799791132412,0.77380195455795,0.0607495566580247,0,0.0788057072991982,0,0.105600336519406,7.70935559131233,0,0,0,0,0,0,0,0,0.08209252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| ||
|short_description=p@chr1:207504446..207504457,+ | |||
}} | }} |
Latest revision as of 03:07, 28 July 2015
Short description: | p@chr1:207504446..207504457, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:207504446..207504457, + |
Coexpression cluster: | C531_Neutrophils_Eosinophils_large_CD14_rectal_epitheloid_Hep2 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.88e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.88e-39 | 42 |
defensive cell | 1.03e-33 | 48 |
phagocyte | 1.03e-33 | 48 |
myeloid leukocyte | 8.62e-29 | 72 |
macrophage dendritic cell progenitor | 4.84e-27 | 61 |
monopoietic cell | 1.09e-25 | 59 |
monocyte | 1.09e-25 | 59 |
monoblast | 1.09e-25 | 59 |
promonocyte | 1.09e-25 | 59 |
granulocyte monocyte progenitor cell | 4.51e-24 | 67 |
myeloid lineage restricted progenitor cell | 2.41e-22 | 66 |
leukocyte | 1.72e-19 | 136 |
myeloid cell | 2.24e-18 | 108 |
common myeloid progenitor | 2.24e-18 | 108 |
hematopoietic lineage restricted progenitor cell | 7.21e-17 | 120 |
nongranular leukocyte | 1.79e-16 | 115 |
hematopoietic oligopotent progenitor cell | 3.62e-15 | 161 |
hematopoietic multipotent progenitor cell | 3.62e-15 | 161 |
hematopoietic stem cell | 3.42e-14 | 168 |
hematopoietic cell | 4.70e-13 | 177 |
eosinophil | 7.44e-08 | 2 |
granulocyte | 2.72e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.82e-29 | 9 |
bone marrow | 1.71e-20 | 76 |
bone element | 1.52e-18 | 82 |
skeletal element | 2.38e-16 | 90 |
immune system | 1.26e-15 | 93 |
hematopoietic system | 1.61e-14 | 98 |
blood island | 1.61e-14 | 98 |
skeletal system | 4.16e-14 | 100 |
upper respiratory tract | 6.31e-13 | 19 |
hemolymphoid system | 1.29e-12 | 108 |
respiratory primordium | 1.25e-08 | 38 |
endoderm of foregut | 1.25e-08 | 38 |