FFCP PHASE1:Hg19::chr1:207497905..207497939,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:207497905..207497939,+
|short_description=p3@CD55
|description=CAGE_peak_3_at_CD55_5end
|association_with_transcript=-63bp_to_ENST00000465534,ENST000004765...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1604 | |EntrezGene=1604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2665 | |HGNC=2665 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-63bp_to_ENST00000465534,ENST00000476590_5end | |||
|cluster_id=chr1:207497905..207497939,+ | |||
|coexpression_cluster_id=C531 | |||
|description=CAGE_peak_3_at_CD55_5end | |||
|id=chr1:207497905..207497939,+ | |||
|ontology_enrichment_celltype=CL:0000860!7.50e-23!45;CL:0002057!8.86e-21!42;CL:0000738!2.80e-15!140;CL:0000766!3.86e-14!76;CL:0002009!7.96e-13!65;CL:0002031!1.88e-12!124;CL:0002087!2.29e-12!119;CL:0002194!6.30e-12!63;CL:0000576!6.30e-12!63;CL:0000040!6.30e-12!63;CL:0000559!6.30e-12!63;CL:0000839!1.05e-11!70;CL:0000557!2.06e-11!71;CL:0000037!3.50e-11!172;CL:0000566!3.50e-11!172;CL:0002032!1.07e-10!165;CL:0000837!1.07e-10!165;CL:0000763!1.39e-09!112;CL:0000049!1.39e-09!112;CL:0000988!3.64e-09!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.25e-21;33!CL:0002057;1.25e-21;33!CL:0000473;1.02e-14;39!CL:0000234;1.02e-14;39!CL:0000576;1.62e-14;48!CL:0000766;4.56e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.24e-29,42;CL:0002057,1.24e-29,42;CL:0000473,4.22e-25,48;CL:0000234,4.22e-25,48;CL:0000766,2.50e-20,72;CL:0002009,2.66e-19,61;CL:0002194,7.35e-18,59;CL:0000576,7.35e-18,59;CL:0000040,7.35e-18,59;CL:0000559,7.35e-18,59;CL:0000738,3.66e-17,136;CL:0000839,3.96e-17,66;CL:0000557,4.06e-17,67;CL:0002031,8.68e-15,120;CL:0002087,1.16e-14,115;CL:0000763,6.91e-12,108;CL:0000049,6.91e-12,108;CL:0000037,1.12e-11,168;CL:0002032,4.82e-11,161;CL:0000837,4.82e-11,161;CL:0000988,5.11e-10,177;CL:0002393,7.44e-07,9;CL:0002397,7.44e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.69e-21;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.03e-11!102;UBERON:0003061!7.03e-11!102;UBERON:0002193!2.06e-09!112;UBERON:0002371!6.47e-09!80;UBERON:0001474!2.64e-08!86;UBERON:0001737!1.94e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.94e-11;9!UBERON:0001557;6.94e-11;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.06e-14,98;UBERON:0003061,1.06e-14,98;UBERON:0002371,5.50e-14,76;UBERON:0002193,5.18e-13,108;UBERON:0001474,1.50e-12,82;UBERON:0001737,7.49e-11,9;UBERON:0004765,8.10e-11,90;UBERON:0002405,9.57e-11,93;UBERON:0003081,3.47e-09,203;UBERON:0001434,5.44e-09,100;UBERON:0001557,4.33e-07,19 | |||
|phase1_expression=0.54503513781167,0.856402095563933,1.40954404095971,1.0007329835313,1.34088328328186,4.36169262050184,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0.74259811776028,1.65698687863958,0.672325146451775,1.80808358407193,0.730310090387373,0,0,0.204000691244253,0.626909442956176,0,0,0.125542639594803,0.152826811495903,0.0821005894499457,0.236132343941038,1.18009283054671,1.15148819429164,0.77408061658038,0,0,0,0.0774672005803016,0.426507697462265,0,2.76997704265939,3.81034450193269,3.25516306073778,0,0.32389366601898,0,2.32637182047304,2.64513160582167,1.4555043671269,2.32429036905685,1.6446715520873,2.47765096716083,5.75384784644301,5.89169625016932,4.25668013799453,14.1345729102014,7.10033151942209,2.70852973188684,6.02375486536335,3.0019676506363,3.14612878223118,15.3041946185451,6.09765151444578,10.2293940127847,1.9791078011203,2.79249120670285,1.70489900213078,10.447532590629,3.40431134814684,12.4564449799115,4.01997864410789,2.08593167368081,2.38907729175628,5.44859552370032,5.52416453981347,10.1267963981083,1.69004229049553,1.27562579979026,2.30624510059213,1.57260083605093,0.901061357049038,0.803627933485401,1.71007646244749,1.59133341759272,1.46131323011707,1.75996244461323,2.73069305631066,0,1.28019066769952,0.800791974072025,2.29900975981793,2.64417949113945,0.954053754535364,3.41527781465669,5.28513470433845,6.11637165000366,0,0,0.263384084775077,0.590129310341499,3.14408610199332,0,1.00311897234407,2.60737813306872,0.946895611469467,1.94826728407911,0.111410456885174,0.883817722424512,3.1014745241707,0.270803863765016,0.512365278902701,0.130059347559878,0.657751618414705,1.38175008892924,0.869409257205157,3.26230438956533,2.1403266247177,1.04535523804977,0.339928028092699,2.29932296161153,1.37450978193052,0.759059076058509,1.59282707162048,0.651083453856419,0,0.752875595388864,0.255973222308837,0,0,0.821127996921047,0.604820229674197,1.87208137048455,1.73789284659359,0,2.01210257911091,0.383587685530591,0.361439152384566,0,1.30361867064741,0.795285947051099,7.78615792484217,0.0945348171640679,0.443458794925128,0.087834785693126,0.523916301990851,0,0,0.324547393654683,0,0,0.715471872916026,1.14398982156026,0.371457501329565,0,0.860234595106124,1.38856200643038,0,1.25849830862972,2.20094433552054,0.626984899610432,0.775250277507987,1.77883131343355,0,0.402829317109147,0.760272105718513,0.732186172644509,0,0,0.892997282840798,2.02076435363553,1.0135033243499,0,0,1.64881569537367,3.9534125230819,11.6334079244498,0.436094052142534,0.496971951695318,0.25326102332916,0.132409180813219,0.286836620748814,0.354668382198357,2.24271040056923,0,1.2333377420858,0.311211035399766,2.02066008104532,1.30769522490767,0,0,0,0.312160076830321,0.570471821544449,1.49448680551801,0.117434498643765,0.323745888736263,0.140450806702248,0.204154171254893,0.737005903870608,0.516628905878827,2.37600571456411,0.989067717114227,0,0,0.168336113954066,0.375355559615893,0,0,0.30648779579902,0.600952235626387,0.794025282120147,0.358779271377724,0.640672166455702,0.211931901159562,0,0.206105058476878,0,0,0.506328996723799,0.0974370051611986,0.252433774244115,0.0920498986422993,0.484938170456436,0,0.10075209822764,0.169560592310488,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0.252320850875628,1.09493207722749,0,2.57296375277154,0,0,0.721879481669586,13.0137480043828,11.1265895451547,10.1224632551062,17.4264476917182,6.53638332277218,9.96536600266606,14.4269499731376,11.5770664423954,12.6966561792309,0.738155454624648,0,0.4115740113314,0,0,1.96565443335525,0,0.441463099414651,0.245976877086227,0.686271241194102,0.109750285408626,0,0.703702806881416,0.185176890317059,0.325808305310325,0,1.44331342025273,0.115930404975077,1.05667824812239,0.288732895522148,0.462985512576611,1.33177906564219,0,0.858486162094873,0,0,0.743155811443641,0,0.16798212819886,0,1.07470227243418,0.290633938513962,0,1.47798971368783,0,0.414656231081544,0.720599767084807,0.12624243342638,0.126995788584338,0,0,0,0.102827492703324,1.50171528921959,0.857479297891735,0,0,0,0.258543431515556,0,0,2.39344304926383,2.08014873822732,0,0,0,0.428933980974443,0,0,0.325736184293735,0.355391948742546,3.95975936466715,0,0,0.099972991182057,1.2162378064119,0,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0,0.336255431980582,1.97030760201927,1.2937654491571,1.66845947163673,0,0,0,0,1.91381625495949,16.478154526838,53.8490626567245,8.70272578215674,0.613457458595699,0.500170521059677,0.271265023699736,0.623912584592421,3.03329280955175,1.10391690523754,0,0,0,0,0,0,0.781952530212746,0,0,1.24060815673732,3.23571301227925,1.49418580924822,0.606255142892519,1.66435439510497,0.604780586659361,1.24053903909388,0.460385919864187,1.12264037773229,1.28139149255701,1.53512174720011,2.2519548960105,4.45254199334973,0.771048469013278,0.532685175939381,0.164254312027618,0,0,1.32945394550784,0.40101294060657,2.5782676902051,0.918515585316854,1.63882051206045,0.524497659837696,0,0.539107359730903,0,0,0.105551628892876,1.13733384070897,0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|phase1_expression=0.54503513781167,0.856402095563933,1.40954404095971,1.0007329835313,1.34088328328186,4.36169262050184,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0.74259811776028,1.65698687863958,0.672325146451775,1.80808358407193,0.730310090387373,0,0,0.204000691244253,0.626909442956176,0,0,0.125542639594803,0.152826811495903,0.0821005894499457,0.236132343941038,1.18009283054671,1.15148819429164,0.77408061658038,0,0,0,0.0774672005803016,0.426507697462265,0,2.76997704265939,3.81034450193269,3.25516306073778,0,0.32389366601898,0,2.32637182047304,2.64513160582167,1.4555043671269,2.32429036905685,1.6446715520873,2.47765096716083,5.75384784644301,5.89169625016932,4.25668013799453,14.1345729102014,7.10033151942209,2.70852973188684,6.02375486536335,3.0019676506363,3.14612878223118,15.3041946185451,6.09765151444578,10.2293940127847,1.9791078011203,2.79249120670285,1.70489900213078,10.447532590629,3.40431134814684,12.4564449799115,4.01997864410789,2.08593167368081,2.38907729175628,5.44859552370032,5.52416453981347,10.1267963981083,1.69004229049553,1.27562579979026,2.30624510059213,1.57260083605093,0.901061357049038,0.803627933485401,1.71007646244749,1.59133341759272,1.46131323011707,1.75996244461323,2.73069305631066,0,1.28019066769952,0.800791974072025,2.29900975981793,2.64417949113945,0.954053754535364,3.41527781465669,5.28513470433845,6.11637165000366,0,0,0.263384084775077,0.590129310341499,3.14408610199332,0,1.00311897234407,2.60737813306872,0.946895611469467,1.94826728407911,0.111410456885174,0.883817722424512,3.1014745241707,0.270803863765016,0.512365278902701,0.130059347559878,0.657751618414705,1.38175008892924,0.869409257205157,3.26230438956533,2.1403266247177,1.04535523804977,0.339928028092699,2.29932296161153,1.37450978193052,0.759059076058509,1.59282707162048,0.651083453856419,0,0.752875595388864,0.255973222308837,0,0,0.821127996921047,0.604820229674197,1.87208137048455,1.73789284659359,0,2.01210257911091,0.383587685530591,0.361439152384566,0,1.30361867064741,0.795285947051099,7.78615792484217,0.0945348171640679,0.443458794925128,0.087834785693126,0.523916301990851,0,0,0.324547393654683,0,0,0.715471872916026,1.14398982156026,0.371457501329565,0,0.860234595106124,1.38856200643038,0,1.25849830862972,2.20094433552054,0.626984899610432,0.775250277507987,1.77883131343355,0,0.402829317109147,0.760272105718513,0.732186172644509,0,0,0.892997282840798,2.02076435363553,1.0135033243499,0,0,1.64881569537367,3.9534125230819,11.6334079244498,0.436094052142534,0.496971951695318,0.25326102332916,0.132409180813219,0.286836620748814,0.354668382198357,2.24271040056923,0,1.2333377420858,0.311211035399766,2.02066008104532,1.30769522490767,0,0,0,0.312160076830321,0.570471821544449,1.49448680551801,0.117434498643765,0.323745888736263,0.140450806702248,0.204154171254893,0.737005903870608,0.516628905878827,2.37600571456411,0.989067717114227,0,0,0.168336113954066,0.375355559615893,0,0,0.30648779579902,0.600952235626387,0.794025282120147,0.358779271377724,0.640672166455702,0.211931901159562,0,0.206105058476878,0,0,0.506328996723799,0.0974370051611986,0.252433774244115,0.0920498986422993,0.484938170456436,0,0.10075209822764,0.169560592310488,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0.252320850875628,1.09493207722749,0,2.57296375277154,0,0,0.721879481669586,13.0137480043828,11.1265895451547,10.1224632551062,17.4264476917182,6.53638332277218,9.96536600266606,14.4269499731376,11.5770664423954,12.6966561792309,0.738155454624648,0,0.4115740113314,0,0,1.96565443335525,0,0.441463099414651,0.245976877086227,0.686271241194102,0.109750285408626,0,0.703702806881416,0.185176890317059,0.325808305310325,0,1.44331342025273,0.115930404975077,1.05667824812239,0.288732895522148,0.462985512576611,1.33177906564219,0,0.858486162094873,0,0,0.743155811443641,0,0.16798212819886,0,1.07470227243418,0.290633938513962,0,1.47798971368783,0,0.414656231081544,0.720599767084807,0.12624243342638,0.126995788584338,0,0,0,0.102827492703324,1.50171528921959,0.857479297891735,0,0,0,0.258543431515556,0,0,2.39344304926383,2.08014873822732,0,0,0,0.428933980974443,0,0,0.325736184293735,0.355391948742546,3.95975936466715,0,0,0.099972991182057,1.2162378064119,0,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0,0.336255431980582,1.97030760201927,1.2937654491571,1.66845947163673,0,0,0,0,1.91381625495949,16.478154526838,53.8490626567245,8.70272578215674,0.613457458595699,0.500170521059677,0.271265023699736,0.623912584592421,3.03329280955175,1.10391690523754,0,0,0,0,0,0,0.781952530212746,0,0,1.24060815673732,3.23571301227925,1.49418580924822,0.606255142892519,1.66435439510497,0.604780586659361,1.24053903909388,0.460385919864187,1.12264037773229,1.28139149255701,1.53512174720011,2.2519548960105,4.45254199334973,0.771048469013278,0.532685175939381,0.164254312027618,0,0,1.32945394550784,0.40101294060657,2.5782676902051,0.918515585316854,1.63882051206045,0.524497659837696,0,0.539107359730903,0,0,0.105551628892876,1.13733384070897,0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| ||
|short_description=p3@CD55 | |||
}} | }} |
Latest revision as of 07:44, 20 September 2015
Short description: | p3@CD55 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CD55_5end |
Coexpression cluster: | C531_Neutrophils_Eosinophils_large_CD14_rectal_epitheloid_Hep2 |
Association with transcript: | -63bp_to_ENST00000465534, ENST00000476590_5end |
EntrezGene: | CD55 |
HGNC: | 2665 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.24e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.24e-29 | 42 |
defensive cell | 4.22e-25 | 48 |
phagocyte | 4.22e-25 | 48 |
myeloid leukocyte | 2.50e-20 | 72 |
macrophage dendritic cell progenitor | 2.66e-19 | 61 |
monopoietic cell | 7.35e-18 | 59 |
monocyte | 7.35e-18 | 59 |
monoblast | 7.35e-18 | 59 |
promonocyte | 7.35e-18 | 59 |
leukocyte | 3.66e-17 | 136 |
myeloid lineage restricted progenitor cell | 3.96e-17 | 66 |
granulocyte monocyte progenitor cell | 4.06e-17 | 67 |
hematopoietic lineage restricted progenitor cell | 8.68e-15 | 120 |
nongranular leukocyte | 1.16e-14 | 115 |
myeloid cell | 6.91e-12 | 108 |
common myeloid progenitor | 6.91e-12 | 108 |
hematopoietic stem cell | 1.12e-11 | 168 |
hematopoietic oligopotent progenitor cell | 4.82e-11 | 161 |
hematopoietic multipotent progenitor cell | 4.82e-11 | 161 |
hematopoietic cell | 5.11e-10 | 177 |
intermediate monocyte | 7.44e-07 | 9 |
CD14-positive, CD16-positive monocyte | 7.44e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.06e-14 | 98 |
blood island | 1.06e-14 | 98 |
bone marrow | 5.50e-14 | 76 |
hemolymphoid system | 5.18e-13 | 108 |
bone element | 1.50e-12 | 82 |
larynx | 7.49e-11 | 9 |
skeletal element | 8.10e-11 | 90 |
immune system | 9.57e-11 | 93 |
lateral plate mesoderm | 3.47e-09 | 203 |
skeletal system | 5.44e-09 | 100 |
upper respiratory tract | 4.33e-07 | 19 |