FFCP PHASE1:Hg19::chr1:27992774..27992780,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:27992774..27992780,- | |||
|coexpression_cluster_id=C296 | |coexpression_cluster_id=C296 | ||
|description=CAGE_peak_at_chr1:27992774..27992780,- | |description=CAGE_peak_at_chr1:27992774..27992780,- | ||
|id=chr1:27992774..27992780,- | |id=chr1:27992774..27992780,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000222;8.20e-11;1!CL:0002379;8.20e-11;1!CL:0002595;1.66e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,1.61e-10,1;CL:0002595,1.79e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.79e-11;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;8.20e-11;1!DOID:10165;8.20e-11;1!DOID:3620;8.20e-11;1!DOID:3565;8.20e-11;1!DOID:1798;8.20e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,8.22e-11,1;DOID:10165,8.22e-11,1;DOID:1798,8.22e-11,1;DOID:3620,1.61e-10,1;DOID:3565,1.61e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.23e-21!115;UBERON:0001049!1.99e-11!57;UBERON:0005068!1.99e-11!57;UBERON:0006241!1.99e-11!57;UBERON:0007135!1.99e-11!57;UBERON:0003075!1.51e-10!86;UBERON:0007284!1.51e-10!86;UBERON:0002020!2.08e-10!34;UBERON:0003528!2.08e-10!34;UBERON:0002346!1.20e-09!90;UBERON:0002616!1.15e-08!59;UBERON:0001869!1.40e-08!32;UBERON:0002780!1.54e-08!41;UBERON:0001890!1.54e-08!41;UBERON:0006240!1.54e-08!41;UBERON:0003080!3.28e-08!42;UBERON:0002791!3.46e-08!33;UBERON:0001893!8.08e-08!34;UBERON:0005743!3.78e-07!86;UBERON:0002308!4.36e-07!9;UBERON:0000125!4.36e-07!9;UBERON:0002619!6.31e-07!22;UBERON:0000955!7.39e-07!69;UBERON:0006238!7.39e-07!69 | |ontology_enrichment_uberon=UBERON:0007023!9.23e-21!115;UBERON:0001049!1.99e-11!57;UBERON:0005068!1.99e-11!57;UBERON:0006241!1.99e-11!57;UBERON:0007135!1.99e-11!57;UBERON:0003075!1.51e-10!86;UBERON:0007284!1.51e-10!86;UBERON:0002020!2.08e-10!34;UBERON:0003528!2.08e-10!34;UBERON:0002346!1.20e-09!90;UBERON:0002616!1.15e-08!59;UBERON:0001869!1.40e-08!32;UBERON:0002780!1.54e-08!41;UBERON:0001890!1.54e-08!41;UBERON:0006240!1.54e-08!41;UBERON:0003080!3.28e-08!42;UBERON:0002791!3.46e-08!33;UBERON:0001893!8.08e-08!34;UBERON:0005743!3.78e-07!86;UBERON:0002308!4.36e-07!9;UBERON:0000125!4.36e-07!9;UBERON:0002619!6.31e-07!22;UBERON:0000955!7.39e-07!69;UBERON:0006238!7.39e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.79e-11;1!UBERON:0001785;2.79e-11;1!UBERON:0002464;2.79e-11;1!UBERON:0004904;2.79e-11;1!UBERON:0001021;2.79e-11;1!UBERON:0002171;3.23e-11;1!UBERON:0006518;3.23e-11;1!UBERON:0008949;3.23e-11;1!UBERON:0000101;3.23e-11;1!UBERON:0002167;3.23e-11;1!UBERON:0002135;8.20e-11;1!UBERON:0002426;8.20e-11;1!UBERON:0003831;8.20e-11;1!UBERON:0003898;8.20e-11;1!UBERON:0004830;8.20e-11;1!UBERON:0003830;8.20e-11;1!UBERON:0005175;8.20e-11;1!UBERON:0001774;8.20e-11;1!UBERON:0001103;8.20e-11;1!UBERON:0003834;1.66e-08;5!UBERON:0001533;1.66e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.79e-11,1;UBERON:0001785,2.79e-11,1;UBERON:0002464,2.79e-11,1;UBERON:0004904,2.79e-11,1;UBERON:0001021,2.79e-11,1;UBERON:0003902,2.79e-11,1;UBERON:0005425,2.79e-11,1;UBERON:0002171,3.41e-11,1;UBERON:0006518,3.41e-11,1;UBERON:0008949,3.41e-11,1;UBERON:0000101,3.41e-11,1;UBERON:0002167,3.41e-11,1;UBERON:0002135,3.76e-11,1;UBERON:0002426,4.15e-11,1;UBERON:0003831,4.15e-11,1;UBERON:0003898,4.15e-11,1;UBERON:0004830,4.15e-11,1;UBERON:0003830,4.15e-11,1;UBERON:0005175,4.15e-11,1;UBERON:0001774,4.15e-11,1;UBERON:0001103,4.15e-11,1;UBERON:0010084,4.15e-11,1;UBERON:0003834,1.79e-08,5;UBERON:0001533,1.79e-08,5 | |||
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|short_description=p@chr1:27992774..27992780,- | |short_description=p@chr1:27992774..27992780,- | ||
}} | }} |
Latest revision as of 06:51, 28 July 2015
Short description: | p@chr1:27992774..27992780, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:27992774..27992780, - |
Coexpression cluster: | C296_gall_small_mesothelioma_acute_bronchioalveolar_epidermoid_mixed |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 1.61e-10 | 1 |
smooth muscle cell of the subclavian artery | 1.79e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.79e-11 | 1 |
cranial nerve | 2.79e-11 | 1 |
nerve trunk | 2.79e-11 | 1 |
nerve connecting eye with brain | 2.79e-11 | 1 |
nerve | 2.79e-11 | 1 |
retinal neural layer | 2.79e-11 | 1 |
presumptive neural retina | 2.79e-11 | 1 |
lower lobe of right lung | 3.41e-11 | 1 |
right lung lobe | 3.41e-11 | 1 |
lower lobe of lung | 3.41e-11 | 1 |
lobe of lung | 3.41e-11 | 1 |
right lung | 3.41e-11 | 1 |
mitral valve | 3.76e-11 | 1 |
chest muscle | 4.15e-11 | 1 |
respiratory system muscle | 4.15e-11 | 1 |
skeletal muscle of trunk | 4.15e-11 | 1 |
respiratory system skeletal muscle | 4.15e-11 | 1 |
thoracic segment muscle | 4.15e-11 | 1 |
chest organ | 4.15e-11 | 1 |
muscle of trunk | 4.15e-11 | 1 |
diaphragm | 4.15e-11 | 1 |
future diaphragm | 4.15e-11 | 1 |
thoracic segment blood vessel | 1.79e-08 | 5 |
subclavian artery | 1.79e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 8.22e-11 | 1 |
endocrine pancreas cancer | 8.22e-11 | 1 |
pancreatic endocrine carcinoma | 8.22e-11 | 1 |
central nervous system cancer | 1.61e-10 | 1 |
meningioma | 1.61e-10 | 1 |