FFCP PHASE1:Hg19::chr17:9955844..9955857,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:9955844..9955857,- | |||
|coexpression_cluster_id=C359 | |coexpression_cluster_id=C359 | ||
|description=CAGE_peak_at_chr17:9955844..9955857,- | |description=CAGE_peak_at_chr17:9955844..9955857,- | ||
|id=chr17:9955844..9955857,- | |id=chr17:9955844..9955857,- | ||
|ontology_enrichment_celltype=CL:0000945!2.99e-83!24;CL:0000826!2.99e-83!24;CL:0000236!1.26e-58!14;CL:0000838!2.22e-58!52;CL:0000542!3.80e-57!53;CL:0000051!3.80e-57!53;CL:0002087!4.96e-27!119;CL:0002031!1.19e-25!124;CL:0000738!6.76e-22!140;CL:0002032!1.74e-17!165;CL:0000837!1.74e-17!165;CL:0000037!1.76e-16!172;CL:0000566!1.76e-16!172;CL:0000988!2.10e-16!182;CL:0000817!4.22e-14!3;CL:0000623!4.16e-13!3;CL:0000825!4.16e-13!3;CL:0000785!7.05e-10!2;CL:0000955!7.05e-10!2;CL:0000818!7.05e-10!2;CL:0000954!7.05e-10!2;CL:0000816!7.05e-10!2 | |ontology_enrichment_celltype=CL:0000945!2.99e-83!24;CL:0000826!2.99e-83!24;CL:0000236!1.26e-58!14;CL:0000838!2.22e-58!52;CL:0000542!3.80e-57!53;CL:0000051!3.80e-57!53;CL:0002087!4.96e-27!119;CL:0002031!1.19e-25!124;CL:0000738!6.76e-22!140;CL:0002032!1.74e-17!165;CL:0000837!1.74e-17!165;CL:0000037!1.76e-16!172;CL:0000566!1.76e-16!172;CL:0000988!2.10e-16!182;CL:0000817!4.22e-14!3;CL:0000623!4.16e-13!3;CL:0000825!4.16e-13!3;CL:0000785!7.05e-10!2;CL:0000955!7.05e-10!2;CL:0000818!7.05e-10!2;CL:0000954!7.05e-10!2;CL:0000816!7.05e-10!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.32e-115;24!CL:0000236;7.73e-101;13!CL:0000542;8.52e-42;53!CL:0000817;8.85e-13;1!CL:0000785;9.92e-13;1!CL:0000819;9.92e-13;1!CL:0000946;4.07e-12;1!CL:0000786;4.07e-12;1!CL:0002087;5.25e-12;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.23e-115,24;CL:0000826,1.23e-115,24;CL:0000236,3.69e-111,14;CL:0000838,3.21e-59,52;CL:0000542,4.56e-58,53;CL:0000051,4.56e-58,53;CL:0000817,5.40e-34,3;CL:0002087,1.87e-25,115;CL:0002031,2.57e-24,120;CL:0000785,4.89e-23,2;CL:0000955,4.89e-23,2;CL:0000818,4.89e-23,2;CL:0000954,4.89e-23,2;CL:0000816,4.89e-23,2;CL:0000738,3.13e-21,136;CL:0002032,1.27e-17,161;CL:0000837,1.27e-17,161;CL:0000037,8.38e-17,168;CL:0000988,7.66e-16,177;CL:0000819,9.92e-13,1;CL:0000946,4.31e-12,1;CL:0000786,4.31e-12,1;CL:0000980,4.31e-12,1;CL:0000134,9.02e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000051;8.52e-42;53!CL:0000954;4.62e-23;2 | |||
|ontology_enrichment_disease=DOID:0060058!3.11e-07!10 | |ontology_enrichment_disease=DOID:0060058!3.11e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:630;7.03e-13;1!DOID:0050177;7.03e-13;1!DOID:0050427;7.03e-13;1!DOID:0060073;9.92e-13;1!DOID:8675;9.92e-13;1!DOID:0060058;8.79e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,7.03e-13,1;DOID:0050177,7.03e-13,1;DOID:0050427,7.03e-13,1;DOID:0060073,9.92e-13,1;DOID:8675,9.92e-13,1;DOID:0060058,8.93e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!3.56e-09!7 | |ontology_enrichment_uberon=UBERON:0004177!3.56e-09!7 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr17:9955844..9955857,- | |short_description=p@chr17:9955844..9955857,- | ||
}} | }} |
Latest revision as of 23:32, 25 July 2015
Short description: | p@chr17:9955844..9955857, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:9955844..9955857, - |
Coexpression cluster: | C359_xeroderma_tonsil_acute_colon_lymph_trachea_bladder |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.23e-115 | 24 |
pro-B cell | 1.23e-115 | 24 |
B cell | 3.69e-111 | 14 |
lymphoid lineage restricted progenitor cell | 3.21e-59 | 52 |
lymphocyte | 4.56e-58 | 53 |
common lymphoid progenitor | 4.56e-58 | 53 |
precursor B cell | 5.40e-34 | 3 |
nongranular leukocyte | 1.87e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 2.57e-24 | 120 |
mature B cell | 4.89e-23 | 2 |
pre-B-II cell | 4.89e-23 | 2 |
transitional stage B cell | 4.89e-23 | 2 |
small pre-B-II cell | 4.89e-23 | 2 |
immature B cell | 4.89e-23 | 2 |
leukocyte | 3.13e-21 | 136 |
hematopoietic oligopotent progenitor cell | 1.27e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.27e-17 | 161 |
hematopoietic stem cell | 8.38e-17 | 168 |
hematopoietic cell | 7.66e-16 | 177 |
B-1 B cell | 9.92e-13 | 1 |
antibody secreting cell | 4.31e-12 | 1 |
plasma cell | 4.31e-12 | 1 |
plasmablast | 4.31e-12 | 1 |
mesenchymal cell | 9.02e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 7.03e-13 | 1 |
monogenic disease | 7.03e-13 | 1 |
xeroderma pigmentosum | 7.03e-13 | 1 |
lymphatic system cancer | 9.92e-13 | 1 |
lymphosarcoma | 9.92e-13 | 1 |
lymphoma | 8.93e-11 | 10 |