FFCP PHASE1:Hg19::chr10:91007323..91007347,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3988 | |EntrezGene=3988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6617 | |HGNC=6617 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=57bp_to_CU680270,HQ447241_5end | |association_with_transcript=57bp_to_CU680270,HQ447241_5end | ||
|cluster_id=chr10:91007323..91007347,- | |||
|coexpression_cluster_id=C54 | |coexpression_cluster_id=C54 | ||
|description=CAGE_peak_11_at_LIPA_5end | |description=CAGE_peak_11_at_LIPA_5end | ||
|id=chr10:91007323..91007347,- | |id=chr10:91007323..91007347,- | ||
|ontology_enrichment_celltype=CL:0002194!8.37e-14!63;CL:0000576!8.37e-14!63;CL:0000040!8.37e-14!63;CL:0000559!8.37e-14!63;CL:0002009!6.10e-13!65;CL:0000839!2.55e-12!70;CL:0000557!6.04e-12!71;CL:0000766!3.02e-10!76;CL:0002057!1.01e-09!42;CL:0000860!1.83e-08!45 | |ontology_enrichment_celltype=CL:0002194!8.37e-14!63;CL:0000576!8.37e-14!63;CL:0000040!8.37e-14!63;CL:0000559!8.37e-14!63;CL:0002009!6.10e-13!65;CL:0000839!2.55e-12!70;CL:0000557!6.04e-12!71;CL:0000766!3.02e-10!76;CL:0002057!1.01e-09!42;CL:0000860!1.83e-08!45 | ||
|ontology_enrichment_celltype_v019=CL:0000235;1.19e-35;6!CL:0000840;1.25e-13;5!CL:0000473;1.45e-09;39!CL:0000234;1.45e-09;39!CL:0000990;2.97e-09;8!CL:0000451;1.18e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.12e-35,6;CL:0002194,2.26e-15,59;CL:0000576,2.26e-15,59;CL:0000040,2.26e-15,59;CL:0000559,2.26e-15,59;CL:0002009,8.10e-15,61;CL:0000840,1.28e-13,5;CL:0001029,1.28e-13,5;CL:0000839,1.41e-13,66;CL:0000557,2.38e-13,67;CL:0000766,2.61e-12,72;CL:0000990,3.01e-09,8;CL:0000473,6.35e-08,48;CL:0000234,6.35e-08,48;CL:0000451,1.20e-07,10;CL:0000763,1.22e-07,108;CL:0000049,1.22e-07,108;CL:0002087,4.54e-07,115 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;4.22e-12;3!DOID:127;4.22e-12;3!DOID:0060072;2.68e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.57e-12,3;DOID:127,3.57e-12,3;DOID:0060072,2.36e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.22e-11!80;UBERON:0002405!1.28e-11!115;UBERON:0001474!2.22e-10!86;UBERON:0002204!4.43e-09!167;UBERON:0004765!4.63e-08!101;UBERON:0001434!4.63e-08!101;UBERON:0002390!1.99e-07!102;UBERON:0003061!1.99e-07!102;UBERON:0002193!7.52e-07!112 | |ontology_enrichment_uberon=UBERON:0002371!1.22e-11!80;UBERON:0002405!1.28e-11!115;UBERON:0001474!2.22e-10!86;UBERON:0002204!4.43e-09!167;UBERON:0004765!4.63e-08!101;UBERON:0001434!4.63e-08!101;UBERON:0002390!1.99e-07!102;UBERON:0003061!1.99e-07!102;UBERON:0002193!7.52e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.61e-09;1!UBERON:0006518;1.61e-09;1!UBERON:0008949;1.61e-09;1!UBERON:0000101;1.61e-09;1!UBERON:0002167;1.61e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.42e-11,76;UBERON:0001474,1.32e-10,82;UBERON:0002171,1.06e-09,1;UBERON:0006518,1.06e-09,1;UBERON:0008949,1.06e-09,1;UBERON:0000101,1.06e-09,1;UBERON:0002167,1.06e-09,1;UBERON:0004765,1.64e-09,90;UBERON:0002405,3.76e-09,93;UBERON:0002390,1.35e-08,98;UBERON:0003061,1.35e-08,98;UBERON:0001434,2.17e-08,100;UBERON:0002193,1.22e-07,108;UBERON:0002204,2.28e-07,167 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,0,0,0,0,0,1.30592814099919,0,0,0.218441372130172,0,0,0,0,0.602694528023977,0,0,0,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0,0.246301768349837,0.0787107813136792,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0.293600439334847,0,0,0.434021741431704,0.223915474239924,1.94336199611388,0.257575567634187,0,0.377875943688809,0.242584061187816,0,0.411167888021826,0.619412741790207,0.28769239232215,0.512321413058201,0.709446689665756,0.344745680736619,1.29096936716765,2.70852973188684,0,0.545812300115692,0.674170453335254,0.306083892370903,0.320929027076094,0,0.329851300186716,0.199463657621632,0.426224750532694,0.580418477257168,0,0,0.502497330513487,0,0,0,0.368277635987565,0.316462387440884,0.845021145247767,0.212604299965044,0.209658645508376,0.22465726229299,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0,0,0,0.393010762749165,0,0.167186495390678,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0,0,0.276350017785848,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,1.34140171940727,0.12786256184353,0,0,0.289693037921647,0,0,0,0,0.087834785693126,0.261958150995425,0,0,7.7891374477124,7.83583817846703,14.6253756570752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.132409180813219,1.14734648299525,0,0,0,0,0,0.134710672069688,0.817309515567294,0,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0.421352420106746,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0.300091096084402,0.103052529238439,0.257640540045629,0,0,0,0,0,0.323292113637624,0,0.10075209822764,0,0.386521706326594,0.272746120590835,0,0,0,0,0,0.252320850875628,0,0,0,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0.474541238222193,0,0,0,0.738155454624648,0,0.4115740113314,0,1.26755034821831,0,1.18157981336281,0,0,0.171567810298526,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0,0.492434012174795,2.80805118167085,3.71577905721821,0,0,0,0.0895585227028483,0.290633938513962,0,0,0.176096868026452,0,0,0.12624243342638,0,0.763976851116555,0,0,0.308482478109971,0.300343057843917,0.857479297891735,0,0,0.07333828582095,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,9.72990245129524,4.01805673145701,14.7583757638122,0,0,0,0.434343920002738,0.205476322550383,0,0,0,0.431255149719035,0.128343036279748,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0.207970861530807,0.356857977594324,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0.106727557803444,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0,0,0,0,0,0.177561725313127,0,0.519254429183621,0.116210378459959,0,0.200506470303285,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0.183138929636687,0,0,0.650060246036521,0,0,0.154048617114644,0.307007349452259,0,0.107420244868274,0.435050081742686,0.0852266274161009,0,0.165284915360978,0,0,0.10115778085555,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0,0.429374660225974,1.116475108079,0.316379424718726,0,0,0,0,0,0,0,0.235624804691373,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0.655894752046633,0,0,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0.199579371432817,0,0.211673582723883,0.324621940274555,0.842391534340376,0,0,0,0,0.1605880751037,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0.23874448473769,0,0,0,0,0,0,0.422250816255987,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0.485560759068186,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.520679215005393,0.0979923974143777,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0.213452994739353,0.19980960958213,0,0,0,0.14405479798815,0,0,0,0.209205692624666,0,0,0,0.273810757783986,0,0,0,0,0,0,0.399358000997982,0.429226048136571,0,0.0671834724867263,0,0,0.157566364614447,0.329663433524666,0.26961417541674,0,0,0,0.272406812223151,0.160753148465019,0,0,0,0,0,0,0.157611414598396,0,0,0.179287339332845,0,0,0,0,1.62899880526114,3.45688596480507,0.326587360109409,0,0,0.340776043570843,0,0.146552233678082,3.97520666736664,0,0.13223260174269,0,0,0,0,1.65695622138878,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0.573409195690071,0.221858103073705,0,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0.302461847526478,0,0,0,0,0,0,0.53168342911599,0.521745061811734,0,0,0,0,0.107410557042488,0.464033759878494,0,0.400027764663154,0,0,0,0,0,0,0.226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| ||
|short_description=p11@LIPA | |short_description=p11@LIPA | ||
}} | }} |
Latest revision as of 21:45, 19 September 2015
Short description: | p11@LIPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_LIPA_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 57bp_to_CU680270, HQ447241_5end |
EntrezGene: | LIPA |
HGNC: | 6617 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.12e-35 | 6 |
monopoietic cell | 2.26e-15 | 59 |
monocyte | 2.26e-15 | 59 |
monoblast | 2.26e-15 | 59 |
promonocyte | 2.26e-15 | 59 |
macrophage dendritic cell progenitor | 8.10e-15 | 61 |
immature conventional dendritic cell | 1.28e-13 | 5 |
common dendritic progenitor | 1.28e-13 | 5 |
myeloid lineage restricted progenitor cell | 1.41e-13 | 66 |
granulocyte monocyte progenitor cell | 2.38e-13 | 67 |
myeloid leukocyte | 2.61e-12 | 72 |
conventional dendritic cell | 3.01e-09 | 8 |
defensive cell | 6.35e-08 | 48 |
phagocyte | 6.35e-08 | 48 |
dendritic cell | 1.20e-07 | 10 |
myeloid cell | 1.22e-07 | 108 |
common myeloid progenitor | 1.22e-07 | 108 |
nongranular leukocyte | 4.54e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.42e-11 | 76 |
bone element | 1.32e-10 | 82 |
lower lobe of right lung | 1.06e-09 | 1 |
right lung lobe | 1.06e-09 | 1 |
lower lobe of lung | 1.06e-09 | 1 |
lobe of lung | 1.06e-09 | 1 |
right lung | 1.06e-09 | 1 |
skeletal element | 1.64e-09 | 90 |
immune system | 3.76e-09 | 93 |
hematopoietic system | 1.35e-08 | 98 |
blood island | 1.35e-08 | 98 |
skeletal system | 2.17e-08 | 100 |
hemolymphoid system | 1.22e-07 | 108 |
musculoskeletal system | 2.28e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.57e-12 | 3 |
leiomyoma | 3.57e-12 | 3 |
benign neoplasm | 2.36e-09 | 4 |