FFCP PHASE1:Hg19::chr20:35176459..35176471,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:35176459..35176471,+ | |||
|coexpression_cluster_id=C384 | |coexpression_cluster_id=C384 | ||
|description=CAGE_peak_at_chr20:35176459..35176471,+ | |description=CAGE_peak_at_chr20:35176459..35176471,+ | ||
|id=chr20:35176459..35176471,+ | |id=chr20:35176459..35176471,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.69e-10!180;CL:0000136!1.84e-08!15;CL:0000057!4.17e-08!75 | |ontology_enrichment_celltype=CL:0000055!8.69e-10!180;CL:0000136!1.84e-08!15;CL:0000057!4.17e-08!75 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.28e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.42e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.88e-08!143;UBERON:0002100!1.10e-07!216;UBERON:0005156!4.36e-07!59;UBERON:0000990!4.36e-07!59;UBERON:0000468!7.20e-07!659;UBERON:0003104!8.10e-07!238;UBERON:0009142!8.10e-07!238 | |ontology_enrichment_uberon=UBERON:0005256!1.88e-08!143;UBERON:0002100!1.10e-07!216;UBERON:0005156!4.36e-07!59;UBERON:0000990!4.36e-07!59;UBERON:0000468!7.20e-07!659;UBERON:0003104!8.10e-07!238;UBERON:0009142!8.10e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0005904;3.65e-08;4!UBERON:0003688;4.68e-08;6!UBERON:0002358;4.68e-08;6!UBERON:0003684;4.68e-08;6!UBERON:0001178;4.68e-08;6!UBERON:0003101;7.53e-07;22!UBERON:0000079;7.53e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005904,1.31e-08,4;UBERON:0005156,9.61e-08,59;UBERON:0000990,9.61e-08,59;UBERON:0003688,1.19e-07,6;UBERON:0002358,1.19e-07,6;UBERON:0003684,1.19e-07,6;UBERON:0001178,1.19e-07,6;UBERON:0003064,1.39e-07,28;UBERON:0000926,1.47e-07,315;UBERON:0004120,1.47e-07,315;UBERON:0006603,1.47e-07,315;UBERON:0003101,5.74e-07,22;UBERON:0000079,5.74e-07,22 | |||
|phase1_expression=1.81678379270557,4.71021152560163,2.11431606143957,1.0007329835313,2.68176656656373,0.872338524100369,2.53299878168311,1.26343974685366,0.261185628199839,0.491467873003018,0,0,0.527533956456907,0.123766352960047,0,0,2.41077811209591,1.46062018077475,1.46379839637152,0,0,0,0,0,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0.722878304769133,0,0.434539556882471,0,0,0.189069634328136,0.443458794925128,0.351339142772504,0.851363990735132,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.01304409331664,0.132409180813219,0.286836620748814,1.06400514659507,2.24271040056923,0,4.19334832309172,0,0.67355336034844,0,0.151357427644931,0,0,0,0,0.448346041655403,0,0,0,0,0.122834317311768,0.103325781175765,3.56400857184616,2.96720315134268,0,1.43723628363248,0.168336113954066,0.125118519871964,0,0.877955241761676,4.29082914118628,3.45547535485173,0.680593098960126,0.358779271377724,0.640672166455702,0.635795703478686,0,0.618315175430633,0,0.930584281657949,0.337552664482532,0.487185025805993,0,0.0920498986422993,0.484938170456436,0,1.20902517873168,0.508681776931463,0,0,0,0,0.265059536642971,0.348581828608555,0.414644220061482,0.504641701751257,0,0,3.21620469096443,1.38134921352481,0.928735856063958,0,0.236613600079688,0.168584690078102,0,0.330881918197182,0.435758888184812,0.237270619111097,0.134831308160164,0.196221465125346,0,0,1.40241773803446,0.8231480226628,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0.115930404975077,1.05667824812239,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,1.17217447210047,0,0,0.300343057843917,0,0,0.87192013766656,0.07333828582095,0.775630294546667,0,0,2.39344304926383,4.16029747645464,0,0,0.266422179016099,0.285955987316295,0,0,0,1.06617584622764,0.791951872933429,0,0,1.99945982364114,0,0,0,0.239624855491583,1.14861935834114,0,0.579125226670317,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0.736148950314839,1.50051156317903,0,2.9115920614313,5.35286966391485,2.20783381047509,1.52283839490527,0,2.27407504055985,2.0694614258501,0,0.553107505625109,1.47702144595741,0.391602314925481,0,0,0,0,0,1.66435439510497,0,0.248107807818777,0.920771839728375,1.68396056659844,1.02511319404561,0.511707249066704,3.69964018630297,0,0.462629081407967,1.24293207719189,0.328508624055237,1.03850885836724,0.464841513839837,0.241718899183244,0.40101294060657,0,1.49258782613989,1.0925470080403,3.93373244878272,0,0,0.784349769176855,0,0.105551628892876,0,0,0.431831832204279,1.54227252690289,0.270946437543853,1.00337954770971,0.254876273045038,0,0.223874754722178,0,0,0,0,0.650756789328606,0,0,0,0,0,6.42735719376638,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0,0.445160178233687,0,0,0,0.10115778085555,0.929691098594572,0,0,0,1.06461206063404,0,0.18532421910392,0.286249773483982,0,0.316379424718726,1.14378116354295,0,0,0.318203247925937,0,0.179872457583315,0.54907405947211,0.589062011728432,0.202182481573316,0,0,0.48763373908959,0.974853958525138,0,0,0.707027159768564,0,0,1.32687795048244,1.31535265576129,0.578775534266688,0,2.02910376962704,2.16876448669825,0.845086807596724,0.286822704408103,1.3754865741837,1.426684205925,0.354761064070598,0.211107635297664,0.329294892959902,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58625035258854,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0.485442086998054,0,0.284136146806413,0,0,0,0,0,0,0,0,5.57894367102995,1.38141957765574,0,0,0,3.42143546427988,0,0,0,8.08875926222856,0,1.11136990144637,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0.139423744278603,2.6932590476329,0.113942055847001,0,0.0897576444097721,0,0,2.47313502185028,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,5.97157158647103,1.32686346755009,5.49927130440263,0,0,0,0,0.802577647298789,0,0,0,0.242780379534093,2.36750641709634,0,0,0.442306057399416,0,0,0,0.330991955875499,0,0,0,0,0,0,0,1.7472666824203,0.171986032471617,0,0,0,4.84945082442097,0,0.677942222341597,0,0,0,0,0.0801588202515337,3.20179492109029,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,1.11712960508902,1.14580212005842,0,0.599037001496973,3.43380838509257,1.33902874465124,1.14211903227435,1.08089965062721,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0.236417121897595,0.104909176269996,0,0,0,7.14695326373367,0.662091970365432,0.5085370753095,1.08599920350743,1.72844298240254,0.979762080328227,0,0,1.02232813071253,0,0,0,0,0,0,0,0.320362237703084,0,0.414239055347196,0.496166021811951,0,0,0,1.08803560673895,0.5013797880454,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0.470531639396343,0,0,0.149254802886874,0.233713309847224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| ||
|short_description=p@chr20:35176459..35176471,+ | |short_description=p@chr20:35176459..35176471,+ | ||
}} | }} |
Latest revision as of 13:35, 28 July 2015
Short description: | p@chr20:35176459..35176471, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:35176459..35176471, + |
Coexpression cluster: | C384_Adipocyte_smooth_bladder_left_aorta_Osteoblast_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.42e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
duct of male reproductive system | 1.31e-08 | 4 |
reproductive structure | 9.61e-08 | 59 |
reproductive system | 9.61e-08 | 59 |
omentum | 1.19e-07 | 6 |
peritoneum | 1.19e-07 | 6 |
abdominal cavity | 1.19e-07 | 6 |
visceral peritoneum | 1.19e-07 | 6 |
intermediate mesoderm | 1.39e-07 | 28 |
mesoderm | 1.47e-07 | 315 |
mesoderm-derived structure | 1.47e-07 | 315 |
presumptive mesoderm | 1.47e-07 | 315 |
male organism | 5.74e-07 | 22 |
male reproductive system | 5.74e-07 | 22 |