FFCP PHASE1:Hg19::chr1:203734634..203734648,+: Difference between revisions
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|id=chr1:203734634..203734648,+
|short_description=p4@LAX1
|description=CAGE_peak_4_at_LAX1_5end
|association_with_transcript=330bp_to_ENST00000442561_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54900 | |EntrezGene=54900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26005 | |HGNC=26005 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=330bp_to_ENST00000442561_5end | |||
|cluster_id=chr1:203734634..203734648,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_4_at_LAX1_5end | |||
|id=chr1:203734634..203734648,+ | |||
|ontology_enrichment_celltype=CL:0002274!1.69e-28!5;CL:0000457!1.69e-28!5;CL:0002191!1.69e-28!5;CL:0000097!1.69e-28!5;CL:0000831!1.69e-28!5;CL:0002028!1.69e-28!5;CL:0000738!1.82e-18!140;CL:0000767!1.37e-16!3;CL:0000623!2.10e-16!3;CL:0000825!2.10e-16!3;CL:0000842!4.88e-16!3;CL:0000163!9.89e-16!9;CL:0000037!1.75e-15!172;CL:0000566!1.75e-15!172;CL:0000988!2.50e-14!182;CL:0000224!3.64e-12!4;CL:0002032!5.88e-11!165;CL:0000837!5.88e-11!165;CL:0002031!3.98e-10!124;CL:0000838!1.88e-08!52;CL:0000080!2.85e-08!6;CL:0000542!2.93e-08!53;CL:0000051!2.93e-08!53;CL:0002087!6.92e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.77e-163;5!CL:0000163;3.71e-91;9!CL:0000151;2.64e-21;36!CL:0000766;6.66e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.34e-163,5;CL:0002028,2.34e-163,5;CL:0000163,3.38e-91,9;CL:0000151,2.31e-23,36;CL:0000839,8.32e-13,66;CL:0000557,1.26e-12,67;CL:0000766,8.59e-12,72;CL:0000763,4.95e-08,108;CL:0000049,4.95e-08,108;CL:0002031,2.87e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8552!7.60e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.34e-11,76;UBERON:0001474,2.00e-10,82;UBERON:0004765,1.52e-09,90;UBERON:0002405,2.97e-09,93;UBERON:0002390,8.34e-09,98;UBERON:0003061,8.34e-09,98;UBERON:0001434,1.22e-08,100;UBERON:0002193,4.95e-08,108 | |||
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|short_description=p4@LAX1 | |||
}} | }} |
Latest revision as of 23:54, 19 September 2015
Short description: | p4@LAX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LAX1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 330bp_to_ENST00000442561_5end |
EntrezGene: | LAX1 |
HGNC: | 26005 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.34e-163 | 5 |
basophil mast progenitor cell | 2.34e-163 | 5 |
endocrine cell | 3.38e-91 | 9 |
secretory cell | 2.31e-23 | 36 |
myeloid lineage restricted progenitor cell | 8.32e-13 | 66 |
granulocyte monocyte progenitor cell | 1.26e-12 | 67 |
myeloid leukocyte | 8.59e-12 | 72 |
myeloid cell | 4.95e-08 | 108 |
common myeloid progenitor | 4.95e-08 | 108 |
hematopoietic lineage restricted progenitor cell | 2.87e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.34e-11 | 76 |
bone element | 2.00e-10 | 82 |
skeletal element | 1.52e-09 | 90 |
immune system | 2.97e-09 | 93 |
hematopoietic system | 8.34e-09 | 98 |
blood island | 8.34e-09 | 98 |
skeletal system | 1.22e-08 | 100 |
hemolymphoid system | 4.95e-08 | 108 |