FFCP PHASE1:Hg19::chr6:33281979..33281992,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6892 | |EntrezGene=6892 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11566 | |HGNC=11566 | ||
|TSSclassifier=strong | |||
|UniProt=C9JA35,A2AB90 | |UniProt=C9JA35,A2AB90 | ||
|association_with_transcript=0bp_to_ENST00000426633,ENST00000467025,uc003odx.1,uc003ody.2,uc003odz.2,uc010jus.1,uc010jut.1,uc011drc.1_5end | |association_with_transcript=0bp_to_ENST00000426633,ENST00000467025,uc003odx.1,uc003ody.2,uc003odz.2,uc010jus.1,uc010jut.1,uc011drc.1_5end | ||
|cluster_id=chr6:33281979..33281992,- | |||
|description=CAGE_peak_4_at_TAPBP_5end | |description=CAGE_peak_4_at_TAPBP_5end | ||
|id=chr6:33281979..33281992,- | |id=chr6:33281979..33281992,- | ||
|ontology_enrichment_celltype=CL:0000220!4.24e-28!246;CL:0002321!1.03e-27!248;CL:0000222!1.38e-21!119;CL:0000548!3.95e-17!679;CL:0000004!3.95e-17!679;CL:0000255!3.95e-17!679;CL:0000066!5.23e-17!254;CL:0000012!5.55e-16!682;CL:0000055!6.08e-16!180;CL:0000183!1.44e-15!59;CL:0000192!1.03e-14!42;CL:0000514!1.03e-14!42;CL:0002371!1.24e-14!591;CL:0000144!1.58e-14!625;CL:0000680!6.04e-14!57;CL:0000056!6.04e-14!57;CL:0000355!6.04e-14!57;CL:0000187!1.64e-13!54;CL:0000359!2.86e-12!32;CL:0000003!6.10e-11!722;CL:0000393!6.23e-10!60;CL:0000211!6.23e-10!60;CL:0000213!1.38e-08!57;CL:0000215!1.38e-08!57;CL:0000076!4.18e-08!62 | |ontology_enrichment_celltype=CL:0000220!4.24e-28!246;CL:0002321!1.03e-27!248;CL:0000222!1.38e-21!119;CL:0000548!3.95e-17!679;CL:0000004!3.95e-17!679;CL:0000255!3.95e-17!679;CL:0000066!5.23e-17!254;CL:0000012!5.55e-16!682;CL:0000055!6.08e-16!180;CL:0000183!1.44e-15!59;CL:0000192!1.03e-14!42;CL:0000514!1.03e-14!42;CL:0002371!1.24e-14!591;CL:0000144!1.58e-14!625;CL:0000680!6.04e-14!57;CL:0000056!6.04e-14!57;CL:0000355!6.04e-14!57;CL:0000187!1.64e-13!54;CL:0000359!2.86e-12!32;CL:0000003!6.10e-11!722;CL:0000393!6.23e-10!60;CL:0000211!6.23e-10!60;CL:0000213!1.38e-08!57;CL:0000215!1.38e-08!57;CL:0000076!4.18e-08!62 | ||
|ontology_enrichment_celltype_v019=CL:0000359;8.96e-12;32!CL:0000192;4.64e-10;43!CL:0000187;2.79e-07;55!CL:0000134;9.97e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.84e-28,250;CL:0000222,1.06e-21,121;CL:0000066,9.89e-18,253;CL:0000192,4.48e-14,43;CL:0000514,4.48e-14,43;CL:0000680,1.76e-13,58;CL:0000056,1.76e-13,58;CL:0000355,1.76e-13,58;CL:0000187,4.99e-13,55;CL:0000359,1.62e-12,32;CL:0000393,1.40e-09,61;CL:0000211,1.40e-09,61;CL:0000076,6.22e-09,63;CL:0000213,7.06e-09,58;CL:0000215,7.06e-09,58 | |||
|ontology_enrichment_development_v019=CL:0000514;4.64e-10;43!CL:0000355;3.51e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!3.45e-16!143;UBERON:0000486!8.60e-15!82;UBERON:0000914!6.84e-14!83;UBERON:0002329!6.84e-14!83;UBERON:0003077!6.84e-14!83;UBERON:0003059!6.84e-14!83;UBERON:0007282!6.84e-14!83;UBERON:0009618!6.84e-14!83;UBERON:0007285!6.84e-14!83;UBERON:0002049!9.46e-14!79;UBERON:0007798!9.46e-14!79;UBERON:0003914!6.91e-13!118;UBERON:0001637!1.23e-12!42;UBERON:0003509!1.23e-12!42;UBERON:0004572!1.23e-12!42;UBERON:0000467!2.44e-12!625;UBERON:0000480!4.70e-12!626;UBERON:0000119!5.82e-12!312;UBERON:0000481!7.63e-12!347;UBERON:0000483!1.00e-11!309;UBERON:0004290!1.27e-11!70;UBERON:0003104!2.05e-11!238;UBERON:0009142!2.05e-11!238;UBERON:0000468!2.18e-11!659;UBERON:0001134!8.02e-11!61;UBERON:0002036!8.02e-11!61;UBERON:0003082!8.02e-11!61;UBERON:0002100!9.34e-11!216;UBERON:0000475!1.37e-10!365;UBERON:0004872!2.43e-10!84;UBERON:0000055!2.46e-10!69;UBERON:0004573!3.50e-10!33;UBERON:0004571!3.50e-10!33;UBERON:0000490!3.72e-10!138;UBERON:0000923!4.16e-10!604;UBERON:0005291!4.16e-10!604;UBERON:0006598!4.16e-10!604;UBERON:0002532!4.16e-10!604;UBERON:0002385!5.60e-10!63;UBERON:0001015!5.60e-10!63;UBERON:0000383!5.60e-10!63;UBERON:0002050!8.23e-10!605;UBERON:0005423!8.23e-10!605;UBERON:0001981!1.45e-09!60;UBERON:0007500!1.45e-09!60;UBERON:0004537!1.45e-09!60;UBERON:0006965!1.45e-09!60;UBERON:0004535!1.53e-09!110;UBERON:0000922!2.65e-09!612;UBERON:0000477!2.88e-09!286;UBERON:0001009!5.67e-09!113;UBERON:0000926!1.93e-08!448;UBERON:0004120!1.93e-08!448;UBERON:0006603!1.93e-08!448 | |ontology_enrichment_uberon=UBERON:0005256!3.45e-16!143;UBERON:0000486!8.60e-15!82;UBERON:0000914!6.84e-14!83;UBERON:0002329!6.84e-14!83;UBERON:0003077!6.84e-14!83;UBERON:0003059!6.84e-14!83;UBERON:0007282!6.84e-14!83;UBERON:0009618!6.84e-14!83;UBERON:0007285!6.84e-14!83;UBERON:0002049!9.46e-14!79;UBERON:0007798!9.46e-14!79;UBERON:0003914!6.91e-13!118;UBERON:0001637!1.23e-12!42;UBERON:0003509!1.23e-12!42;UBERON:0004572!1.23e-12!42;UBERON:0000467!2.44e-12!625;UBERON:0000480!4.70e-12!626;UBERON:0000119!5.82e-12!312;UBERON:0000481!7.63e-12!347;UBERON:0000483!1.00e-11!309;UBERON:0004290!1.27e-11!70;UBERON:0003104!2.05e-11!238;UBERON:0009142!2.05e-11!238;UBERON:0000468!2.18e-11!659;UBERON:0001134!8.02e-11!61;UBERON:0002036!8.02e-11!61;UBERON:0003082!8.02e-11!61;UBERON:0002100!9.34e-11!216;UBERON:0000475!1.37e-10!365;UBERON:0004872!2.43e-10!84;UBERON:0000055!2.46e-10!69;UBERON:0004573!3.50e-10!33;UBERON:0004571!3.50e-10!33;UBERON:0000490!3.72e-10!138;UBERON:0000923!4.16e-10!604;UBERON:0005291!4.16e-10!604;UBERON:0006598!4.16e-10!604;UBERON:0002532!4.16e-10!604;UBERON:0002385!5.60e-10!63;UBERON:0001015!5.60e-10!63;UBERON:0000383!5.60e-10!63;UBERON:0002050!8.23e-10!605;UBERON:0005423!8.23e-10!605;UBERON:0001981!1.45e-09!60;UBERON:0007500!1.45e-09!60;UBERON:0004537!1.45e-09!60;UBERON:0006965!1.45e-09!60;UBERON:0004535!1.53e-09!110;UBERON:0000922!2.65e-09!612;UBERON:0000477!2.88e-09!286;UBERON:0001009!5.67e-09!113;UBERON:0000926!1.93e-08!448;UBERON:0004120!1.93e-08!448;UBERON:0006603!1.93e-08!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.49e-09;33!UBERON:0004571;1.49e-09;33!UBERON:0001637;2.29e-09;42!UBERON:0003509;2.29e-09;42!UBERON:0004572;2.29e-09;42 | |||
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| ||
|short_description=p4@TAPBP | |short_description=p4@TAPBP | ||
}} | }} |
Latest revision as of 07:03, 18 September 2015
Short description: | p4@TAPBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TAPBP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000426633, ENST00000467025, uc003odx.1, uc003ody.2, uc003odz.2, uc010jus.1, uc010jut.1, uc011drc.1_5end |
EntrezGene: | TAPBP |
HGNC: | 11566 |
UniProt: | C9JA35A2AB90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.84e-28 | 250 |
mesodermal cell | 1.06e-21 | 121 |
epithelial cell | 9.89e-18 | 253 |
smooth muscle cell | 4.48e-14 | 43 |
smooth muscle myoblast | 4.48e-14 | 43 |
muscle precursor cell | 1.76e-13 | 58 |
myoblast | 1.76e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.76e-13 | 58 |
muscle cell | 4.99e-13 | 55 |
vascular associated smooth muscle cell | 1.62e-12 | 32 |
electrically responsive cell | 1.40e-09 | 61 |
electrically active cell | 1.40e-09 | 61 |
squamous epithelial cell | 6.22e-09 | 63 |
lining cell | 7.06e-09 | 58 |
barrier cell | 7.06e-09 | 58 |