FFCP PHASE1:Hg19::chr1:20355975..20355980,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:20355975..20355980,-
|short_description=p@chr1:20355975..20355980,-
|description=CAGE_peak_at_chr1:20355975..20355980,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:20355975..20355980,- | |||
|description=CAGE_peak_at_chr1:20355975..20355980,- | |||
|id=chr1:20355975..20355980,- | |||
|ontology_enrichment_celltype=CL:0000746!9.89e-24!3;CL:0000513!9.89e-24!3;CL:0000737!5.94e-18!4;CL:0002494!1.16e-16!16;CL:0002548!6.83e-12!6;CL:0002557!4.52e-09!1 | |||
|ontology_enrichment_celltype_v019=CL:0000746;1.22e-14;3!CL:0000737;2.53e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.22e-14,3;CL:0000513,1.22e-14,3;CL:0000737,2.53e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.21e-88;4!UBERON:0007284;1.21e-88;4!CL:0000513;1.22e-14;3!UBERON:0003104;4.76e-12;31 | |||
|ontology_enrichment_disease=DOID:114!3.18e-16!2;DOID:178!7.75e-09!1;DOID:326!7.75e-09!1;DOID:3978!7.75e-09!1;DOID:3394!7.75e-09!1;DOID:5844!7.75e-09!1;DOID:0060085!1.42e-08!1;DOID:3165!1.42e-08!1;DOID:0060121!1.42e-08!1;DOID:2438!1.42e-08!1;DOID:4418!1.42e-08!1;DOID:1287!1.48e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:114;6.30e-21;2!DOID:1287;3.60e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,6.96e-21,2;DOID:1287,3.79e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.09e-52!27;UBERON:0000948!1.25e-36!24;UBERON:0005498!1.25e-36!24;UBERON:0004140!1.25e-36!24;UBERON:0009881!1.25e-36!24;UBERON:0004141!1.25e-36!24;UBERON:0003084!1.25e-36!24;UBERON:0007005!1.25e-36!24;UBERON:0004139!1.25e-36!24;UBERON:0004291!1.25e-36!24;UBERON:0003103!4.36e-25!69;UBERON:0003978!4.97e-24!3;UBERON:0009751!4.97e-24!3;UBERON:0000946!4.97e-24!3;UBERON:0002523!4.97e-24!3;UBERON:0005983!4.97e-24!3;UBERON:0002165!4.97e-24!3;UBERON:0002062!4.97e-24!3;UBERON:0007280!4.97e-24!3;UBERON:0002133!1.18e-16!2;UBERON:0004872!7.32e-13!84;UBERON:0001009!2.71e-12!113;UBERON:0004145!2.54e-11!3;UBERON:0003914!6.70e-10!118;UBERON:0002135!3.31e-09!1;UBERON:0002134!3.58e-09!1;UBERON:0005208!3.58e-09!1;UBERON:0005946!3.58e-09!1;UBERON:0005965!3.58e-09!1;UBERON:0002078!3.58e-09!1;UBERON:0002146!3.87e-09!1;UBERON:0005623!3.87e-09!1;UBERON:0002342!4.44e-09!14;UBERON:0005062!4.44e-09!14;UBERON:0007023!1.52e-08!115;UBERON:0001301!1.65e-08!1;UBERON:0004535!8.42e-08!110;UBERON:0001048!2.84e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;9.50e-118;3!UBERON:0000946;9.50e-118;3!UBERON:0002133;2.34e-79;2!UBERON:0002135;1.21e-40;1!UBERON:0002134;1.21e-40;1!UBERON:0005208;1.21e-40;1!UBERON:0004145;1.21e-40;1!UBERON:0005946;1.21e-40;1!UBERON:0005965;1.21e-40;1!UBERON:0002078;1.21e-40;1!UBERON:0002146;2.70e-40;1!UBERON:0005623;2.70e-40;1!UBERON:0007100;6.36e-40;25!UBERON:0010313;3.65e-36;10!UBERON:0000948;2.28e-29;22!UBERON:0002081;4.21e-21;2!UBERON:0004151;1.50e-14;3!UBERON:0003103;2.69e-07;61 | |||
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|short_description=p@chr1:20355975..20355980,- | |||
}} | }} |
Latest revision as of 02:30, 28 July 2015
Short description: | p@chr1:20355975..20355980, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:20355975..20355980, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.22e-14 | 3 |
cardiac muscle myoblast | 1.22e-14 | 3 |
striated muscle cell | 2.53e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
heart disease | 6.96e-21 | 2 |
cardiovascular system disease | 3.79e-11 | 4 |