FFCP PHASE1:Hg19::chr1:157108746..157108762,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2117 | |EntrezGene=2117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3492 | |HGNC=3492 | ||
|TSSclassifier=strong | |||
|UniProt=B4E3M7,P41162 | |UniProt=B4E3M7,P41162 | ||
|association_with_transcript=-363bp_to_NM_001145312,uc001fqr.2,uc001fqt.2_5end | |association_with_transcript=-363bp_to_NM_001145312,uc001fqr.2,uc001fqt.2_5end | ||
|cluster_id=chr1:157108746..157108762,- | |||
|coexpression_cluster_id=C61 | |coexpression_cluster_id=C61 | ||
|description=CAGE_peak_4_at_ETV3_5end | |description=CAGE_peak_4_at_ETV3_5end | ||
|id=chr1:157108746..157108762,- | |id=chr1:157108746..157108762,- | ||
|ontology_enrichment_celltype=CL:0000738!5.95e-25!140;CL:0000037!1.74e-19!172;CL:0000566!1.74e-19!172;CL:0000451!1.93e-18!10;CL:0000988!1.43e-17!182;CL:0002031!1.18e-16!124;CL:0002032!1.32e-16!165;CL:0000837!1.32e-16!165;CL:0002087!1.10e-15!119;CL:0000557!1.51e-15!71;CL:0000990!1.39e-14!8;CL:0002057!3.45e-14!42;CL:0000766!9.84e-14!76;CL:0002009!1.24e-13!65;CL:0000763!4.43e-13!112;CL:0000049!4.43e-13!112;CL:0000860!7.47e-13!45;CL:0000839!7.64e-12!70;CL:0000453!1.11e-11!5;CL:0002194!1.46e-11!63;CL:0000576!1.46e-11!63;CL:0000040!1.46e-11!63;CL:0000559!1.46e-11!63;CL:0000219!2.61e-09!390;CL:0000134!3.58e-09!358;CL:0000840!9.01e-09!5;CL:0001029!9.01e-09!5;CL:0002320!1.14e-08!365;CL:0000784!1.41e-07!3;CL:0000034!1.75e-07!444;CL:0000623!2.66e-07!3;CL:0000825!2.66e-07!3;CL:0000723!5.92e-07!436;CL:0000048!6.77e-07!430 | |ontology_enrichment_celltype=CL:0000738!5.95e-25!140;CL:0000037!1.74e-19!172;CL:0000566!1.74e-19!172;CL:0000451!1.93e-18!10;CL:0000988!1.43e-17!182;CL:0002031!1.18e-16!124;CL:0002032!1.32e-16!165;CL:0000837!1.32e-16!165;CL:0002087!1.10e-15!119;CL:0000557!1.51e-15!71;CL:0000990!1.39e-14!8;CL:0002057!3.45e-14!42;CL:0000766!9.84e-14!76;CL:0002009!1.24e-13!65;CL:0000763!4.43e-13!112;CL:0000049!4.43e-13!112;CL:0000860!7.47e-13!45;CL:0000839!7.64e-12!70;CL:0000453!1.11e-11!5;CL:0002194!1.46e-11!63;CL:0000576!1.46e-11!63;CL:0000040!1.46e-11!63;CL:0000559!1.46e-11!63;CL:0000219!2.61e-09!390;CL:0000134!3.58e-09!358;CL:0000840!9.01e-09!5;CL:0001029!9.01e-09!5;CL:0002320!1.14e-08!365;CL:0000784!1.41e-07!3;CL:0000034!1.75e-07!444;CL:0000623!2.66e-07!3;CL:0000825!2.66e-07!3;CL:0000723!5.92e-07!436;CL:0000048!6.77e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000451;1.27e-64;10!CL:0000453;1.24e-56;5!CL:0000990;5.87e-45;8!CL:0000784;3.64e-34;3!CL:0001014;1.06e-23;2!CL:0001016;1.06e-23;2!CL:0000840;1.28e-17;5!CL:0002032;1.86e-12;1!CL:0000557;1.86e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000451,1.27e-64,10;CL:0000453,1.32e-56,5;CL:0000990,5.88e-45,8;CL:0000784,3.44e-34,3;CL:0001014,1.13e-23,2;CL:0001016,1.13e-23,2;CL:0000840,1.29e-17,5;CL:0001029,1.29e-17,5;CL:0000738,6.31e-12,136;CL:0000037,5.73e-11,168;CL:0000988,2.61e-10,177;CL:0002032,8.13e-07,161;CL:0000837,8.13e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.94e-14!102;UBERON:0003061!3.94e-14!102;UBERON:0002371!4.69e-14!80;UBERON:0001474!1.37e-13!86;UBERON:0002193!8.04e-13!112;UBERON:0002405!9.64e-13!115;UBERON:0004765!2.57e-10!101;UBERON:0001434!2.57e-10!101;UBERON:0002384!5.45e-08!375 | |ontology_enrichment_uberon=UBERON:0002390!3.94e-14!102;UBERON:0003061!3.94e-14!102;UBERON:0002371!4.69e-14!80;UBERON:0001474!1.37e-13!86;UBERON:0002193!8.04e-13!112;UBERON:0002405!9.64e-13!115;UBERON:0004765!2.57e-10!101;UBERON:0001434!2.57e-10!101;UBERON:0002384!5.45e-08!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,1.35426486594342,0.188242339542605,0.272906150057846,0.449446968890169,0.612167784741805,0.320929027076094,0,0,0.199463657621632,0,0.580418477257168,0,0.622822248995575,0,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0,0,0,0.22465726229299,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,1.12101712596307,0,0.590129310341499,0,0.616804496998528,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,1.04535523804977,0,0.766440987203842,0.34362744548263,0,0,0,0,0,0,0,0,0,1.61285394579786,1.33720097891754,0.868946423296794,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0.324547393654683,0,0.26591592103773,6.67773748054957,4.0039643754609,3.34311751196608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.37872730027914,0.063497894292169,0.381988425558278,0,0,0.205654985406647,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1673383622212,0.862510299438069,0.898401253958239,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0.62962469366128,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0.288950589901519,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,23.6222586129075,6.1904156364636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,0.285465333544967,0,0,0,0,0.233713309847224,0.554805861502613,0.568209015825267,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0.363697318405119,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,11.4967582215239,11.692105947576,46.6161373629156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,1.59905849479886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0,0,0.101988829741982,0.534434810531121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,1.35426486594342,0.188242339542605,0.272906150057846,0.449446968890169,0.612167784741805,0.320929027076094,0,0,0.199463657621632,0,0.580418477257168,0,0.622822248995575,0,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0,0,0,0.22465726229299,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,1.12101712596307,0,0.590129310341499,0,0.616804496998528,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,1.04535523804977,0,0.766440987203842,0.34362744548263,0,0,0,0,0,0,0,0,0,1.61285394579786,1.33720097891754,0.868946423296794,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0.324547393654683,0,0.26591592103773,6.67773748054957,4.0039643754609,3.34311751196608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.37872730027914,0.063497894292169,0.381988425558278,0,0,0.205654985406647,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1673383622212,0.862510299438069,0.898401253958239,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0.62962469366128,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0.288950589901519,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,23.6222586129075,6.1904156364636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,0.285465333544967,0,0,0,0,0.233713309847224,0.554805861502613,0.568209015825267,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0.363697318405119,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,11.4967582215239,11.692105947576,46.6161373629156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,1.59905849479886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0,0,0.101988829741982,0.534434810531121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p4@ETV3 | |short_description=p4@ETV3 | ||
}} | }} |
Latest revision as of 18:56, 17 September 2015
Short description: | p4@ETV3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ETV3_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | -363bp_to_NM_001145312, uc001fqr.2, uc001fqt.2_5end |
EntrezGene: | ETV3 |
HGNC: | 3492 |
UniProt: | B4E3M7P41162 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dendritic cell | 1.27e-64 | 10 |
Langerhans cell | 1.32e-56 | 5 |
conventional dendritic cell | 5.88e-45 | 8 |
plasmacytoid dendritic cell | 3.44e-34 | 3 |
CD1a-positive Langerhans cell | 1.13e-23 | 2 |
immature CD1a-positive Langerhans cell | 1.13e-23 | 2 |
immature conventional dendritic cell | 1.29e-17 | 5 |
common dendritic progenitor | 1.29e-17 | 5 |
leukocyte | 6.31e-12 | 136 |
hematopoietic stem cell | 5.73e-11 | 168 |
hematopoietic cell | 2.61e-10 | 177 |
hematopoietic oligopotent progenitor cell | 8.13e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.13e-07 | 161 |