FFCP PHASE1:Hg19::chr1:202127379..202127382,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:202127379..202127382,-
|short_description=p6@PTPN7
|description=CAGE_peak_6_at_PTPN7_5end
|association_with_transcript=314bp_to_ENST00000492977_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5778 | |EntrezGene=5778 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9659 | |HGNC=9659 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=314bp_to_ENST00000492977_5end | |||
|cluster_id=chr1:202127379..202127382,- | |||
|description=CAGE_peak_6_at_PTPN7_5end | |||
|id=chr1:202127379..202127382,- | |||
|ontology_enrichment_celltype=CL:0000037!8.56e-74!172;CL:0000566!8.56e-74!172;CL:0000988!2.98e-72!182;CL:0002032!2.50e-70!165;CL:0000837!2.50e-70!165;CL:0000738!4.16e-50!140;CL:0002087!1.86e-45!119;CL:0002031!1.68e-43!124;CL:0000763!8.20e-41!112;CL:0000049!8.20e-41!112;CL:0000542!1.73e-25!53;CL:0000051!1.73e-25!53;CL:0000838!7.78e-25!52;CL:0000766!7.10e-23!76;CL:0000839!1.95e-19!70;CL:0000557!5.56e-19!71;CL:0000134!1.39e-17!358;CL:0002194!1.63e-17!63;CL:0000576!1.63e-17!63;CL:0000040!1.63e-17!63;CL:0000559!1.63e-17!63;CL:0000084!2.27e-17!25;CL:0000827!2.27e-17!25;CL:0002320!1.22e-16!365;CL:0002009!1.26e-16!65;CL:0002057!2.76e-15!42;CL:0000860!1.07e-13!45;CL:0000219!2.27e-13!390;CL:0000791!2.18e-10!18;CL:0000789!2.18e-10!18;CL:0002420!2.18e-10!18;CL:0002419!2.18e-10!18;CL:0000790!2.18e-10!18;CL:0000048!1.30e-09!430;CL:0000723!4.28e-09!436;CL:0000945!7.66e-09!24;CL:0000826!7.66e-09!24;CL:0000034!8.27e-09!444 | |||
|ontology_enrichment_celltype_v019=CL:0000763;1.25e-12;100!CL:0000988;2.17e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,2.17e-33,161;CL:0000837,2.17e-33,161;CL:0000037,3.23e-33,168;CL:0000988,5.89e-31,177;CL:0000763,1.35e-29,108;CL:0000049,1.35e-29,108;CL:0000738,4.22e-12,136;CL:0002031,5.55e-11,120;CL:0000134,6.73e-10,354;CL:0002087,1.57e-09,115;CL:0002320,1.70e-09,361;CL:0000766,2.35e-08,72;CL:0000219,4.39e-08,386;CL:0000839,6.10e-07,66;CL:0000557,8.57e-07,67 | |||
|ontology_enrichment_development_v019=CL:0000049;4.77e-10;108 | |||
|ontology_enrichment_disease=DOID:2531!1.70e-37!51;DOID:0060083!1.70e-37!51;DOID:1240!4.66e-33!39;DOID:8692!2.36e-27!31;DOID:1036!6.50e-10!8;DOID:0060058!5.79e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.99e-45;31!DOID:1240;6.85e-36;39!DOID:2531;4.03e-24;51!DOID:0060083;4.03e-24;51!DOID:1036;2.96e-10;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,8.04e-47,39;DOID:8692,2.71e-46,31;DOID:2531,1.71e-40,51;DOID:0060083,1.71e-40,51;DOID:0050686,1.49e-10,137;DOID:1036,3.31e-10,8 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.50e-27!102;UBERON:0003061!1.50e-27!102;UBERON:0002193!2.60e-24!112;UBERON:0002371!2.99e-17!80;UBERON:0002384!2.30e-15!375;UBERON:0001474!3.83e-15!86;UBERON:0002405!1.17e-12!115;UBERON:0004765!4.58e-11!101;UBERON:0001434!4.58e-11!101;UBERON:0000178!1.70e-08!15;UBERON:0000179!1.70e-08!15;UBERON:0000463!1.70e-08!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.01e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52826811495903,0.656804715599566,1.25937250101887,0,0.383829398097213,0.154816123316076,0,0,0,0.232401601740905,0.568676929949686,0.293600439334847,0,0,0.217010870715852,0,0,0,0.581592955118259,1.13362783106643,0.727752183563449,1.16214518452842,1.23350366406548,0.619412741790207,1.1507695692886,0.768482119587302,0.709446689665756,0,1.29096936716765,0,0.564727018627814,1.09162460023138,0.449446968890169,0.306083892370903,0.641858054152187,0,0.659702600373432,0.398927315243264,0,0.870627715885752,0.56738522469114,0.622822248995575,1.00499466102697,1.0429658368404,0.868755378820466,0,0.368277635987565,0.949387162322653,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0.546138611262131,0.889509253863555,0,0.400395987036012,0,0,0,1.1384259382189,0,0,0,0,0.263384084775077,0,0.393010762749165,0.616804496998528,1.33749196312542,0.651844533267181,0.473447805734733,1.94826728407911,2.56244050835899,0.883817722424512,0.221533894583621,2.70803863765016,2.81800903396485,1.95089021339817,1.64437904603676,1.65810010671509,2.60822777161547,1.03800594213442,0.535081656179426,0,1.47302145506836,0.766440987203842,0.68725489096526,1.51811815211702,0.637130828648193,0.651083453856419,0,0,0.383959833463255,1.24930726552346,0.710331756132051,1.64225599384209,0,1.33720097891754,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.649094787309367,0.696518949197069,0.930705723632056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.594524649154913,0,0,0,0,0,0,0.492663237895943,2.0251139823042,0,0.864719720501769,1.38866676769018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0.336255431980582,0.197030760201927,0,0.128343036279748,0,0,0,0,0,2.24702107184155,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.238231775457789,0,0,0.540031437238115,0.79312517629427,0,0,0,0.185803175125719,0,0.711418433484141,1.75368900001705,2.19537308576098,0.383010740264733,2.96343015813436,1.62310970137278,2.52717460302113,0.456469358066384,2.19351854082233,0,1.52362600021443,2.24823305145179,1.00899853595524,1.70338495076131,5.839590860848,2.15068535015921,1.11838053946208,1.00109485027145,1.17232857241224,3.89768643453339,0,2.97501246323581,1.99843180798692,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,2.47205811340139,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2193298195736,2.82564461511045,1.32969345520125,1.1279783030859,1.56850027454192,0.671286347903371,0.189753732724185,0.158936578980379,0,0,0,0,0.995261931078505,0,0.611030144933625,0.296521128680622,0.741383633679017,0.313265848516366,0,0,0.234264445725339,0.364909578431332,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14929529049075,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.39997479170986,1.60037594541211,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49804183822513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.803892390468535,0,0,0,0,0.581300188524055,0.31037357147929,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0.961705476909699 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| ||
|short_description=p6@PTPN7 | |||
}} | }} |
Latest revision as of 20:01, 19 September 2015
Short description: | p6@PTPN7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PTPN7_5end |
Coexpression cluster: | NA |
Association with transcript: | 314bp_to_ENST00000492977_5end |
EntrezGene: | PTPN7 |
HGNC: | 9659 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 2.17e-33 | 161 |
hematopoietic multipotent progenitor cell | 2.17e-33 | 161 |
hematopoietic stem cell | 3.23e-33 | 168 |
hematopoietic cell | 5.89e-31 | 177 |
myeloid cell | 1.35e-29 | 108 |
common myeloid progenitor | 1.35e-29 | 108 |
leukocyte | 4.22e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 5.55e-11 | 120 |
mesenchymal cell | 6.73e-10 | 354 |
nongranular leukocyte | 1.57e-09 | 115 |
connective tissue cell | 1.70e-09 | 361 |
myeloid leukocyte | 2.35e-08 | 72 |
motile cell | 4.39e-08 | 386 |
myeloid lineage restricted progenitor cell | 6.10e-07 | 66 |
granulocyte monocyte progenitor cell | 8.57e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.01e-09 | 371 |
Ontology term | p-value | n |
---|---|---|
leukemia | 8.04e-47 | 39 |
myeloid leukemia | 2.71e-46 | 31 |
hematologic cancer | 1.71e-40 | 51 |
immune system cancer | 1.71e-40 | 51 |
organ system cancer | 1.49e-10 | 137 |
chronic leukemia | 3.31e-10 | 8 |