FFCP PHASE1:Hg19::chr1:201708643..201708716,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:201708643..201708716,+
|short_description=p8@NAV1
|description=CAGE_peak_8_at_NAV1_5end
|association_with_transcript=0bp_to_uc001gwv.1_5end
|EntrezGene=89...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=89796 | |EntrezGene=89796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15989 | |HGNC=15989 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001gwv.1_5end | |||
|cluster_id=chr1:201708643..201708716,+ | |||
|description=CAGE_peak_8_at_NAV1_5end | |||
|id=chr1:201708643..201708716,+ | |||
|ontology_enrichment_celltype=CL:0000359!2.70e-12!32;CL:0000055!3.30e-12!180;CL:0000680!1.01e-10!57;CL:0000056!1.01e-10!57;CL:0000355!1.01e-10!57;CL:0000183!2.62e-10!59;CL:0000187!3.65e-10!54;CL:0000136!4.17e-10!15;CL:0000192!7.23e-10!42;CL:0000514!7.23e-10!42;CL:0000222!3.09e-08!119;CL:0000393!4.29e-08!60;CL:0000211!4.29e-08!60;CL:0002494!1.53e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.40e-17;32!CL:0000136;2.47e-13;13!CL:0000192;1.16e-08;43!CL:0002494;5.99e-07;16!CL:0002548;8.16e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.31e-18,32;CL:0000136,6.52e-15,15;CL:0000192,3.25e-11,43;CL:0000514,3.25e-11,43;CL:0000187,1.81e-09,55;CL:0000680,2.87e-09,58;CL:0000056,2.87e-09,58;CL:0000355,2.87e-09,58;CL:0000393,1.03e-07,61;CL:0000211,1.03e-07,61;CL:0002494,5.02e-07,16;CL:0002548,6.58e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;1.16e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;1.38e-13;33!UBERON:0004571;1.38e-13;33!UBERON:0001637;1.29e-12;42!UBERON:0003509;1.29e-12;42!UBERON:0004572;1.29e-12;42!UBERON:0006876;3.35e-10;11!UBERON:0002049;4.06e-09;75!UBERON:0007798;4.06e-09;75!UBERON:0007500;2.61e-08;56!UBERON:0001981;2.61e-08;56!UBERON:0004537;2.61e-08;56!UBERON:0003688;2.45e-07;6!UBERON:0002358;2.45e-07;6!UBERON:0003684;2.45e-07;6!UBERON:0001178;2.45e-07;6!UBERON:0001893;2.82e-07;34!UBERON:0000948;2.90e-07;22!UBERON:0005284;9.45e-07;5 | |||
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| ||
|short_description=p8@NAV1 | |||
}} | }} |
Latest revision as of 18:52, 19 September 2015
Short description: | p8@NAV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_NAV1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001gwv.1_5end |
EntrezGene: | NAV1 |
HGNC: | 15989 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.31e-18 | 32 |
fat cell | 6.52e-15 | 15 |
smooth muscle cell | 3.25e-11 | 43 |
smooth muscle myoblast | 3.25e-11 | 43 |
muscle cell | 1.81e-09 | 55 |
muscle precursor cell | 2.87e-09 | 58 |
myoblast | 2.87e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.87e-09 | 58 |
electrically responsive cell | 1.03e-07 | 61 |
electrically active cell | 1.03e-07 | 61 |
cardiocyte | 5.02e-07 | 16 |
cardiac fibroblast | 6.58e-07 | 6 |