FFCP PHASE1:Hg19::chr5:92489155..92489169,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:92489155..92489169,- | |||
|coexpression_cluster_id=C225 | |coexpression_cluster_id=C225 | ||
|description=CAGE_peak_at_chr5:92489155..92489169,- | |description=CAGE_peak_at_chr5:92489155..92489169,- | ||
|id=chr5:92489155..92489169,- | |id=chr5:92489155..92489169,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000322;2.74e-12;3!CL:0000083;1.12e-09;4!CL:0000082;6.36e-08;19!CL:0002149;8.72e-07;6!CL:0002255;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,2.89e-12,3;CL:0000083,1.12e-09,4;CL:0000082,6.82e-08,19;CL:0002149,8.48e-07,6;CL:0002255,8.48e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1115!5.84e-07!20 | |ontology_enrichment_disease=DOID:1115!5.84e-07!20 | ||
|ontology_enrichment_disease_v019=DOID:1325;9.48e-20;7!DOID:3904;9.48e-20;7!DOID:4074;5.48e-18;2!DOID:4905;5.48e-18;2!DOID:3498;5.48e-18;2!DOID:3910;9.86e-18;2!DOID:3905;1.31e-15;9!DOID:1324;8.85e-10;15!DOID:1793;1.12e-09;4!DOID:5409;1.50e-09;4!DOID:0050615;3.14e-09;16!DOID:3908;6.78e-08;5!DOID:1115;1.42e-07;20!DOID:170;7.17e-07;6!DOID:3001;8.72e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,1.15e-19,7;DOID:3904,1.15e-19,7;DOID:4074,5.48e-18,2;DOID:4905,5.48e-18,2;DOID:3498,5.48e-18,2;DOID:3910,1.07e-17,2;DOID:3905,1.52e-15,9;DOID:1324,9.66e-10,15;DOID:1793,1.12e-09,4;DOID:5409,1.70e-09,4;DOID:0050615,3.41e-09,16;DOID:0050687,1.02e-08,143;DOID:3908,7.01e-08,5;DOID:1115,1.33e-07,20;DOID:170,7.17e-07,6;DOID:3001,8.48e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001894!2.16e-11!7;UBERON:0006222!2.16e-11!7;UBERON:0003075!1.07e-09!86;UBERON:0007284!1.07e-09!86;UBERON:0003296!2.27e-09!4;UBERON:0010133!2.27e-09!4;UBERON:0002346!3.42e-09!90;UBERON:0007023!2.94e-08!115;UBERON:0001049!4.85e-08!57;UBERON:0005068!4.85e-08!57;UBERON:0006241!4.85e-08!57;UBERON:0007135!4.85e-08!57 | |ontology_enrichment_uberon=UBERON:0001894!2.16e-11!7;UBERON:0006222!2.16e-11!7;UBERON:0003075!1.07e-09!86;UBERON:0007284!1.07e-09!86;UBERON:0003296!2.27e-09!4;UBERON:0010133!2.27e-09!4;UBERON:0002346!3.42e-09!90;UBERON:0007023!2.94e-08!115;UBERON:0001049!4.85e-08!57;UBERON:0005068!4.85e-08!57;UBERON:0006241!4.85e-08!57;UBERON:0007135!4.85e-08!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;9.86e-18;2!UBERON:0002173;9.86e-18;2!UBERON:0002186;9.86e-18;2!UBERON:0002369;2.07e-12;3!UBERON:0001235;2.07e-12;3!UBERON:0006858;2.07e-12;3!UBERON:0004821;2.74e-12;3!UBERON:0007499;2.74e-12;3!UBERON:0003215;2.74e-12;3!UBERON:0010368;2.74e-12;3!UBERON:0009911;2.74e-12;3!UBERON:0002299;2.74e-12;3!UBERON:0006524;2.74e-12;3!UBERON:0008874;2.74e-12;3!UBERON:0002169;2.74e-12;3!UBERON:0004894;2.74e-12;3!UBERON:0009856;1.50e-09;4!UBERON:0004802;6.36e-08;19!UBERON:0000115;6.36e-08;19!UBERON:0002048;5.74e-07;22!UBERON:0004807;5.74e-07;22!UBERON:0000117;5.74e-07;22!UBERON:0000171;5.74e-07;22!UBERON:0000170;5.74e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.07e-17,2;UBERON:0002173,1.07e-17,2;UBERON:0002186,1.07e-17,2;UBERON:0002369,2.07e-12,3;UBERON:0001235,2.07e-12,3;UBERON:0006858,2.07e-12,3;UBERON:0004821,2.89e-12,3;UBERON:0003215,2.89e-12,3;UBERON:0010368,2.89e-12,3;UBERON:0009911,2.89e-12,3;UBERON:0002299,2.89e-12,3;UBERON:0006524,2.89e-12,3;UBERON:0008874,2.89e-12,3;UBERON:0002169,2.89e-12,3;UBERON:0004894,2.89e-12,3;UBERON:0004802,6.82e-08,19;UBERON:0000115,6.82e-08,19;UBERON:0002048,6.09e-07,22;UBERON:0000117,6.09e-07,22;UBERON:0000171,6.09e-07,22;UBERON:0000170,6.09e-07,22;UBERON:0005597,6.09e-07,22;UBERON:0000118,6.09e-07,22 | |||
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|short_description=p@chr5:92489155..92489169,- | |short_description=p@chr5:92489155..92489169,- | ||
}} | }} |
Latest revision as of 17:16, 30 July 2015
Short description: | p@chr5:92489155..92489169, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:92489155..92489169, - |
Coexpression cluster: | C225_ductal_alveolar_giant_prostate_salivary_squamous_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 2.89e-12 | 3 |
epithelial cell of pancreas | 1.12e-09 | 4 |
epithelial cell of lung | 6.82e-08 | 19 |
epithelial cell of uterus | 8.48e-07 | 6 |
stromal cell of endometrium | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.07e-17 | 2 |
alveolar duct | 1.07e-17 | 2 |
bronchiole | 1.07e-17 | 2 |
adrenal gland | 2.07e-12 | 3 |
adrenal cortex | 2.07e-12 | 3 |
adrenal/interrenal gland | 2.07e-12 | 3 |
pulmonary alveolus epithelium | 2.89e-12 | 3 |
alveolus | 2.89e-12 | 3 |
pulmonary lobule | 2.89e-12 | 3 |
lobule | 2.89e-12 | 3 |
alveolus of lung | 2.89e-12 | 3 |
alveolar system | 2.89e-12 | 3 |
pulmonary acinus | 2.89e-12 | 3 |
alveolar sac | 2.89e-12 | 3 |
alveolar wall | 2.89e-12 | 3 |
respiratory tract epithelium | 6.82e-08 | 19 |
lung epithelium | 6.82e-08 | 19 |
lung | 6.09e-07 | 22 |
respiratory tube | 6.09e-07 | 22 |
respiration organ | 6.09e-07 | 22 |
pair of lungs | 6.09e-07 | 22 |
lung primordium | 6.09e-07 | 22 |
lung bud | 6.09e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 1.15e-19 | 7 |
bronchogenic carcinoma | 1.15e-19 | 7 |
pancreas adenocarcinoma | 5.48e-18 | 2 |
pancreatic carcinoma | 5.48e-18 | 2 |
pancreatic ductal adenocarcinoma | 5.48e-18 | 2 |
lung adenocarcinoma | 1.07e-17 | 2 |
lung carcinoma | 1.52e-15 | 9 |
lung cancer | 9.66e-10 | 15 |
pancreatic cancer | 1.12e-09 | 4 |
lung small cell carcinoma | 1.70e-09 | 4 |
respiratory system cancer | 3.41e-09 | 16 |
cell type cancer | 1.02e-08 | 143 |
non-small cell lung carcinoma | 7.01e-08 | 5 |
sarcoma | 1.33e-07 | 20 |
endocrine gland cancer | 7.17e-07 | 6 |
female reproductive endometrioid cancer | 8.48e-07 | 6 |