FFCP PHASE1:Hg19::chr1:201334364..201334418,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:201334364..201334418,-
|short_description=p4@TNNT2
|description=CAGE_peak_4_at_TNNT2_5end
|association_with_transcript=-10bp_to_ENST00000479297_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7139 | |EntrezGene=7139 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11949 | |HGNC=11949 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_ENST00000479297_5end | |||
|cluster_id=chr1:201334364..201334418,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_4_at_TNNT2_5end | |||
|id=chr1:201334364..201334418,- | |||
|ontology_enrichment_celltype=CL:0000188!1.68e-22!9;CL:0000680!6.69e-07!57;CL:0000056!6.69e-07!57;CL:0000355!6.69e-07!57;CL:0000594!8.27e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.42e-27;4!UBERON:0007284;2.42e-27;4!UBERON:0010226;1.61e-13;1!UBERON:0010227;2.05e-13;1!UBERON:0004140;4.23e-13;1!UBERON:0000358;4.77e-13;1!UBERON:0003104;4.10e-09;31 | |||
|ontology_enrichment_disease=DOID:114!2.02e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:114;8.00e-25;2!DOID:178;3.76e-13;1!DOID:326;3.76e-13;1!DOID:3978;3.76e-13;1!DOID:3394;3.76e-13;1!DOID:5844;3.76e-13;1!DOID:1287;6.44e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.00e-25,2;DOID:178,3.76e-13,1;DOID:326,3.76e-13,1;DOID:3978,3.76e-13,1;DOID:3394,3.76e-13,1;DOID:5844,3.76e-13,1;DOID:1287,6.44e-13,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!7.61e-22!27;UBERON:0004151!7.52e-15!3;UBERON:0003978!9.87e-15!3;UBERON:0009751!9.87e-15!3;UBERON:0000946!9.87e-15!3;UBERON:0002523!9.87e-15!3;UBERON:0005983!9.87e-15!3;UBERON:0002165!9.87e-15!3;UBERON:0002062!9.87e-15!3;UBERON:0007280!9.87e-15!3;UBERON:0003103!1.06e-14!69;UBERON:0000948!9.85e-14!24;UBERON:0005498!9.85e-14!24;UBERON:0004140!9.85e-14!24;UBERON:0009881!9.85e-14!24;UBERON:0004141!9.85e-14!24;UBERON:0003084!9.85e-14!24;UBERON:0007005!9.85e-14!24;UBERON:0004139!9.85e-14!24;UBERON:0004291!9.85e-14!24;UBERON:0002081!2.02e-10!2;UBERON:0002133!2.11e-10!2;UBERON:0001134!1.18e-07!61;UBERON:0002036!1.18e-07!61;UBERON:0003082!1.18e-07!61;UBERON:0002385!2.45e-07!63;UBERON:0001015!2.45e-07!63;UBERON:0000383!2.45e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.92e-37;25!UBERON:0004151;1.64e-36;3!UBERON:0003978;3.36e-36;3!UBERON:0000946;3.36e-36;3!UBERON:0002081;8.00e-25;2!UBERON:0002133;9.02e-25;2!UBERON:0000948;3.57e-19;22!UBERON:0002084;1.61e-13;1!UBERON:0002082;1.61e-13;1!UBERON:0002079;2.05e-13;1!UBERON:0002135;2.32e-13;1!UBERON:0002146;2.95e-13;1!UBERON:0005623;2.95e-13;1!UBERON:0002134;3.33e-13;1!UBERON:0005208;3.33e-13;1!UBERON:0004145;3.33e-13;1!UBERON:0005946;3.33e-13;1!UBERON:0005965;3.33e-13;1!UBERON:0002078;3.33e-13;1!UBERON:0007029;9.17e-13;1!UBERON:0001134;9.78e-12;16!UBERON:0002036;9.78e-12;16!UBERON:0010313;2.55e-11;10!UBERON:0003103;1.45e-09;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.64e-36,3;UBERON:0003978,3.36e-36,3;UBERON:0009751,3.36e-36,3;UBERON:0000946,3.36e-36,3;UBERON:0002523,3.36e-36,3;UBERON:0005983,3.36e-36,3;UBERON:0002165,3.36e-36,3;UBERON:0002062,3.36e-36,3;UBERON:0007280,3.36e-36,3;UBERON:0007100,1.33e-34,27;UBERON:0002081,8.00e-25,2;UBERON:0010227,8.00e-25,2;UBERON:0002133,9.02e-25,2;UBERON:0000948,1.49e-17,24;UBERON:0005498,1.49e-17,24;UBERON:0004140,1.49e-17,24;UBERON:0009881,1.49e-17,24;UBERON:0004141,1.49e-17,24;UBERON:0003084,1.49e-17,24;UBERON:0007005,1.49e-17,24;UBERON:0004139,1.49e-17,24;UBERON:0004291,1.49e-17,24;UBERON:0003103,3.29e-16,68;UBERON:0004797,6.46e-16,7;UBERON:0002084,1.61e-13,1;UBERON:0002082,1.61e-13,1;UBERON:0010226,1.61e-13,1;UBERON:0002079,2.06e-13,1;UBERON:0002135,2.32e-13,1;UBERON:0002146,2.95e-13,1;UBERON:0005623,2.95e-13,1;UBERON:0002134,3.33e-13,1;UBERON:0005208,3.33e-13,1;UBERON:0005946,3.33e-13,1;UBERON:0005965,3.33e-13,1;UBERON:0002078,3.33e-13,1;UBERON:0007029,8.64e-13,1;UBERON:0010313,2.55e-11,10;UBERON:0002342,2.55e-11,10;UBERON:0005062,2.55e-11,10;UBERON:0001009,1.55e-07,112 | |||
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| ||
|short_description=p4@TNNT2 | |||
}} | }} |
Latest revision as of 17:30, 19 September 2015
Short description: | p4@TNNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TNNT2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -10bp_to_ENST00000479297_5end |
EntrezGene: | TNNT2 |
HGNC: | 11949 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 8.00e-25 | 2 |
vascular disease | 3.76e-13 | 1 |
ischemia | 3.76e-13 | 1 |
extrinsic cardiomyopathy | 3.76e-13 | 1 |
myocardial ischemia | 3.76e-13 | 1 |
myocardial infarction | 3.76e-13 | 1 |
cardiovascular system disease | 6.44e-13 | 4 |