FFCP PHASE1:Hg19::chr1:201333486..201333508,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:201333486..201333508,-
|short_description=p6@TNNT2
|description=CAGE_peak_6_at_TNNT2_5end
|association_with_transcript=-170bp_to_ENST00000460780,uc001gwj.1...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7139 | |EntrezGene=7139 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11949 | |HGNC=11949 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-170bp_to_ENST00000460780,uc001gwj.1_5end | |||
|cluster_id=chr1:201333486..201333508,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_6_at_TNNT2_5end | |||
|id=chr1:201333486..201333508,- | |||
|ontology_enrichment_celltype=CL:0000188!6.42e-15!9 | |||
|ontology_enrichment_celltype_v019=CL:0002575;2.57e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,2.67e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0005062;6.19e-33;4!UBERON:0007284;6.19e-33;4!UBERON:0010226;5.56e-16;1!UBERON:0010227;9.99e-16;1!UBERON:0004140;1.66e-15;1!UBERON:0000358;2.06e-15;1 | |||
|ontology_enrichment_disease=DOID:114!1.20e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.08e-29;2!DOID:178;1.34e-15;1!DOID:326;1.34e-15;1!DOID:3978;1.34e-15;1!DOID:3394;1.34e-15;1!DOID:5844;1.34e-15;1!DOID:1287;2.22e-15;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.08e-29,2;DOID:178,1.34e-15,1;DOID:326,1.34e-15,1;DOID:3978,1.34e-15,1;DOID:3394,1.34e-15,1;DOID:5844,1.34e-15,1;DOID:1287,2.22e-15,4 | |||
|ontology_enrichment_uberon=UBERON:0004151!1.11e-13!3;UBERON:0003978!1.26e-13!3;UBERON:0009751!1.26e-13!3;UBERON:0000946!1.26e-13!3;UBERON:0002523!1.26e-13!3;UBERON:0005983!1.26e-13!3;UBERON:0002165!1.26e-13!3;UBERON:0002062!1.26e-13!3;UBERON:0007280!1.26e-13!3;UBERON:0007100!3.20e-11!27;UBERON:0002133!1.10e-09!2;UBERON:0002081!1.20e-09!2;UBERON:0001630!3.20e-09!2;UBERON:0005090!3.20e-09!2;UBERON:0001872!2.04e-07!5;UBERON:0007023!5.20e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.00e-45;25!UBERON:0004151;8.03e-44;3!UBERON:0003978;1.24e-43;3!UBERON:0000946;1.24e-43;3!UBERON:0002133;8.05e-30;2!UBERON:0002081;1.08e-29;2!UBERON:0000948;2.98e-23;22!UBERON:0002084;5.56e-16;1!UBERON:0002082;5.56e-16;1!UBERON:0002135;7.46e-16;1!UBERON:0002134;8.63e-16;1!UBERON:0005208;8.63e-16;1!UBERON:0004145;8.63e-16;1!UBERON:0005946;8.63e-16;1!UBERON:0005965;8.63e-16;1!UBERON:0002078;8.63e-16;1!UBERON:0002079;9.99e-16;1!UBERON:0002146;1.16e-15;1!UBERON:0005623;1.16e-15;1!UBERON:0010313;1.35e-13;10!UBERON:0003103;2.70e-09;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,8.03e-44,3;UBERON:0003978,1.24e-43,3;UBERON:0009751,1.24e-43,3;UBERON:0000946,1.24e-43,3;UBERON:0002523,1.24e-43,3;UBERON:0005983,1.24e-43,3;UBERON:0002165,1.24e-43,3;UBERON:0002062,1.24e-43,3;UBERON:0007280,1.24e-43,3;UBERON:0007100,5.17e-42,27;UBERON:0002133,8.05e-30,2;UBERON:0002081,1.08e-29,2;UBERON:0010227,1.08e-29,2;UBERON:0000948,2.71e-21,24;UBERON:0005498,2.71e-21,24;UBERON:0004140,2.71e-21,24;UBERON:0009881,2.71e-21,24;UBERON:0004141,2.71e-21,24;UBERON:0003084,2.71e-21,24;UBERON:0007005,2.71e-21,24;UBERON:0004139,2.71e-21,24;UBERON:0004291,2.71e-21,24;UBERON:0004797,3.86e-19,7;UBERON:0003103,3.18e-16,68;UBERON:0002084,5.56e-16,1;UBERON:0002082,5.56e-16,1;UBERON:0010226,5.56e-16,1;UBERON:0002135,7.46e-16,1;UBERON:0002134,8.63e-16,1;UBERON:0005208,8.63e-16,1;UBERON:0005946,8.63e-16,1;UBERON:0005965,8.63e-16,1;UBERON:0002078,8.63e-16,1;UBERON:0002079,9.99e-16,1;UBERON:0002146,1.16e-15,1;UBERON:0005623,1.16e-15,1;UBERON:0010313,1.35e-13,10;UBERON:0002342,1.35e-13,10;UBERON:0005062,1.35e-13,10;UBERON:0001009,1.70e-09,112;UBERON:0007023,2.34e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,2.05886054286514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0.551346289938122,0,0.145016693914229,0.255679882248303,1.24644849905432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.1083328916023,9.8538982325024,12.2038414178058,7.18844401796368,22.7489805512383,6.91831518069805,6.85271419364608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0.335434687599266,0,0.0524545881349981,0,0,0,10.7204298956005,24.497402903521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80019435264208,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0.971421986118279,0,0.198950775161368,0,0.11294608203896,0,0,0,0,0,0.490296643507811,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0.342233301085281,0,0,0,0,0,0,0,4.69281884806909,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,2.05886054286514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0.551346289938122,0,0.145016693914229,0.255679882248303,1.24644849905432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.1083328916023,9.8538982325024,12.2038414178058,7.18844401796368,22.7489805512383,6.91831518069805,6.85271419364608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0.335434687599266,0,0.0524545881349981,0,0,0,10.7204298956005,24.497402903521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80019435264208,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0.971421986118279,0,0.198950775161368,0,0.11294608203896,0,0,0,0,0,0.490296643507811,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0.342233301085281,0,0,0,0,0,0,0,4.69281884806909,0,0,0,0.201273793591026,0 | ||
|short_description=p6@TNNT2 | |||
}} | }} |
Latest revision as of 17:28, 19 September 2015
Short description: | p6@TNNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TNNT2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -170bp_to_ENST00000460780, uc001gwj.1_5end |
EntrezGene: | TNNT2 |
HGNC: | 11949 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 2.67e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.08e-29 | 2 |
vascular disease | 1.34e-15 | 1 |
ischemia | 1.34e-15 | 1 |
extrinsic cardiomyopathy | 1.34e-15 | 1 |
myocardial ischemia | 1.34e-15 | 1 |
myocardial infarction | 1.34e-15 | 1 |
cardiovascular system disease | 2.22e-15 | 4 |