FFCP PHASE1:Hg19::chr1:201332479..201332500,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:201332479..201332500,-
|short_description=p9@TNNT2
|description=CAGE_peak_9_at_TNNT2_5end
|association_with_transcript=-1bp_to_ENST00000476888_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7139 | |EntrezGene=7139 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11949 | |HGNC=11949 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_ENST00000476888_5end | |||
|cluster_id=chr1:201332479..201332500,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_9_at_TNNT2_5end | |||
|id=chr1:201332479..201332500,- | |||
|ontology_enrichment_celltype=CL:0000188!1.51e-15!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.25e-32;4!UBERON:0007284;1.25e-32;4!UBERON:0010226;6.44e-16;1!UBERON:0010227;8.63e-16;1!UBERON:0004140;1.54e-15;1!UBERON:0000358;2.06e-15;1!UBERON:0006603;1.10e-07;65!UBERON:0003104;1.55e-07;31 | |||
|ontology_enrichment_disease=DOID:114!2.43e-13!2;DOID:178!1.86e-07!1;DOID:326!1.86e-07!1;DOID:3978!1.86e-07!1;DOID:3394!1.86e-07!1;DOID:5844!1.86e-07!1;DOID:1287!4.44e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:114;6.96e-30;2!DOID:178;9.99e-16;1!DOID:326;9.99e-16;1!DOID:3978;9.99e-16;1!DOID:3394;9.99e-16;1!DOID:5844;9.99e-16;1!DOID:1287;1.79e-15;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,6.96e-30,2;DOID:178,9.99e-16,1;DOID:326,9.99e-16,1;DOID:3978,9.99e-16,1;DOID:3394,9.99e-16,1;DOID:5844,9.99e-16,1;DOID:1287,1.79e-15,4 | |||
|ontology_enrichment_uberon=UBERON:0004151!5.70e-19!3;UBERON:0003978!7.24e-19!3;UBERON:0009751!7.24e-19!3;UBERON:0000946!7.24e-19!3;UBERON:0002523!7.24e-19!3;UBERON:0005983!7.24e-19!3;UBERON:0002165!7.24e-19!3;UBERON:0002062!7.24e-19!3;UBERON:0007280!7.24e-19!3;UBERON:0007100!9.13e-17!27;UBERON:0002081!3.70e-13!2;UBERON:0002133!4.42e-13!2;UBERON:0003103!7.49e-12!69;UBERON:0000948!1.41e-08!24;UBERON:0005498!1.41e-08!24;UBERON:0004140!1.41e-08!24;UBERON:0009881!1.41e-08!24;UBERON:0004141!1.41e-08!24;UBERON:0003084!1.41e-08!24;UBERON:0007005!1.41e-08!24;UBERON:0004139!1.41e-08!24;UBERON:0004291!1.41e-08!24;UBERON:0002084!1.55e-07!1;UBERON:0002082!1.55e-07!1;UBERON:0004706!1.55e-07!1;UBERON:0002146!1.65e-07!1;UBERON:0005623!1.65e-07!1;UBERON:0002079!1.75e-07!1;UBERON:0002135!2.10e-07!1;UBERON:0002134!2.37e-07!1;UBERON:0005208!2.37e-07!1;UBERON:0005946!2.37e-07!1;UBERON:0005965!2.37e-07!1;UBERON:0002078!2.37e-07!1;UBERON:0007029!3.82e-07!1;UBERON:0007023!4.16e-07!115;UBERON:0003112!8.67e-07!1;UBERON:0000032!8.67e-07!1;UBERON:0005253!8.67e-07!1;UBERON:0003128!8.67e-07!1;UBERON:0002241!8.67e-07!1;UBERON:0001703!8.67e-07!1;UBERON:0004761!8.67e-07!1;UBERON:0009617!8.67e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.11e-45;25!UBERON:0004151;1.91e-43;3!UBERON:0003978;3.17e-43;3!UBERON:0000946;3.17e-43;3!UBERON:0002081;2.22e-29;2!UBERON:0002133;3.18e-29;2!UBERON:0000948;3.77e-23;22!UBERON:0002084;6.44e-16;1!UBERON:0002082;6.44e-16;1!UBERON:0002146;7.46e-16;1!UBERON:0005623;7.46e-16;1!UBERON:0002079;8.63e-16;1!UBERON:0002135;1.24e-15;1!UBERON:0002134;2.06e-15;1!UBERON:0005208;2.06e-15;1!UBERON:0004145;2.06e-15;1!UBERON:0005946;2.06e-15;1!UBERON:0005965;2.06e-15;1!UBERON:0002078;2.06e-15;1!UBERON:0010313;1.79e-13;10!UBERON:0003103;2.73e-09;61 | |||
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|short_description=p9@TNNT2 | |||
}} | }} |
Latest revision as of 17:26, 19 September 2015
Short description: | p9@TNNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TNNT2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -1bp_to_ENST00000476888_5end |
EntrezGene: | TNNT2 |
HGNC: | 11949 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 6.96e-30 | 2 |
vascular disease | 9.99e-16 | 1 |
ischemia | 9.99e-16 | 1 |
extrinsic cardiomyopathy | 9.99e-16 | 1 |
myocardial ischemia | 9.99e-16 | 1 |
myocardial infarction | 9.99e-16 | 1 |
cardiovascular system disease | 1.79e-15 | 4 |