FFCP PHASE1:Hg19::chr1:200119992..200120017,+: Difference between revisions
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|id=chr1:200119992..200120017,+
|short_description=p@chr1:200119992..200120017,+
|description=CAGE_peak_at_chr1:200119992..200120017,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:200119992..200120017,+ | |||
|coexpression_cluster_id=C400 | |||
|description=CAGE_peak_at_chr1:200119992..200120017,+ | |||
|id=chr1:200119992..200120017,+ | |||
|ontology_enrichment_celltype=CL:0002274!2.29e-09!5;CL:0000457!2.29e-09!5;CL:0002191!2.29e-09!5;CL:0000097!2.29e-09!5;CL:0000831!2.29e-09!5;CL:0002028!2.29e-09!5;CL:0000163!4.81e-09!9;CL:0002032!1.21e-08!165;CL:0000837!1.21e-08!165;CL:0000988!2.82e-08!182;CL:0000037!8.11e-08!172;CL:0000566!8.11e-08!172 | |||
|ontology_enrichment_celltype_v019=CL:0000097;9.32e-17;5!CL:0000163;6.20e-14;9!CL:0002556;3.51e-08;6!CL:0000763;4.40e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,7.20e-17,5;CL:0002028,7.20e-17,5;CL:0002032,7.87e-15,161;CL:0000837,7.87e-15,161;CL:0000163,4.25e-14,9;CL:0000037,5.61e-14,168;CL:0000988,5.58e-13,177;CL:0000763,2.84e-12,108;CL:0000049,2.84e-12,108;CL:0002556,3.60e-08,6;CL:0000219,1.12e-07,386;CL:0000134,1.48e-07,354;CL:0002320,2.80e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!4.42e-12!31;DOID:2531!2.09e-11!51;DOID:0060083!2.09e-11!51;DOID:1240!3.19e-11!39;DOID:1036!1.87e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.14e-17;31!DOID:1240;8.89e-15;39!DOID:2531;1.22e-10;51!DOID:0060083;1.22e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,4.93e-19,39;DOID:8692,1.22e-17,31;DOID:2531,2.78e-16,51;DOID:0060083,2.78e-16,51 | |||
|ontology_enrichment_uberon=UBERON:0003102!3.15e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;8.85e-11;2!UBERON:0002757;8.85e-11;2!UBERON:0010134;8.85e-11;2!UBERON:0005408;8.85e-11;2!UBERON:0001899;8.85e-11;2!UBERON:0001758;3.51e-08;6!UBERON:0003672;3.51e-08;6!UBERON:0003129;4.55e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.35e-10,2;UBERON:0002757,1.35e-10,2;UBERON:0010134,1.35e-10,2;UBERON:0005408,1.35e-10,2;UBERON:0001899,1.35e-10,2;UBERON:0001758,3.60e-08,6;UBERON:0003672,3.60e-08,6;UBERON:0003129,4.65e-07,7;UBERON:0002384,6.65e-07,371 | |||
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| ||
|short_description=p@chr1:200119992..200120017,+ | |||
}} | }} |
Latest revision as of 02:00, 28 July 2015
Short description: | p@chr1:200119992..200120017, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:200119992..200120017, + |
Coexpression cluster: | C400_acute_leukemia_chronic_myelodysplastic_NK_pancreas_duodenum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.20e-17 | 5 |
basophil mast progenitor cell | 7.20e-17 | 5 |
hematopoietic oligopotent progenitor cell | 7.87e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.87e-15 | 161 |
endocrine cell | 4.25e-14 | 9 |
hematopoietic stem cell | 5.61e-14 | 168 |
hematopoietic cell | 5.58e-13 | 177 |
myeloid cell | 2.84e-12 | 108 |
common myeloid progenitor | 2.84e-12 | 108 |
fibroblast of periodontium | 3.60e-08 | 6 |
motile cell | 1.12e-07 | 386 |
mesenchymal cell | 1.48e-07 | 354 |
connective tissue cell | 2.80e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.35e-10 | 2 |
regional part of epithalamus | 1.35e-10 | 2 |
secretory circumventricular organ | 1.35e-10 | 2 |
circumventricular organ | 1.35e-10 | 2 |
epithalamus | 1.35e-10 | 2 |
periodontium | 3.60e-08 | 6 |
dentition | 3.60e-08 | 6 |
skull | 4.65e-07 | 7 |
connective tissue | 6.65e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
leukemia | 4.93e-19 | 39 |
myeloid leukemia | 1.22e-17 | 31 |
hematologic cancer | 2.78e-16 | 51 |
immune system cancer | 2.78e-16 | 51 |