FFCP PHASE1:Hg19::chr11:71781096..71781147,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4926 | |EntrezGene=4926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8059 | |HGNC=8059 | ||
|TSSclassifier=strong | |||
|UniProt=F5H1L0,F5H4Y4,Q86XH4 | |UniProt=F5H1L0,F5H4Y4,Q86XH4 | ||
|association_with_transcript=0bp_to_ENST00000534987,ENST00000535087,ENST00000535838,uc001orp.2_5end | |association_with_transcript=0bp_to_ENST00000534987,ENST00000535087,ENST00000535838,uc001orp.2_5end | ||
|cluster_id=chr11:71781096..71781147,- | |||
|description=CAGE_peak_3_at_NUMA1_5end | |description=CAGE_peak_3_at_NUMA1_5end | ||
|id=chr11:71781096..71781147,- | |id=chr11:71781096..71781147,- | ||
|ontology_enrichment_celltype=CL:0000766!9.58e-31!76;CL:0000839!8.49e-29!70;CL:0000557!1.16e-28!71;CL:0002194!1.05e-27!63;CL:0000576!1.05e-27!63;CL:0000040!1.05e-27!63;CL:0000559!1.05e-27!63;CL:0002009!7.44e-27!65;CL:0002057!1.76e-23!42;CL:0000860!3.23e-21!45;CL:0000763!2.33e-19!112;CL:0000049!2.33e-19!112;CL:0002371!1.00e-18!591;CL:0000144!3.37e-13!625;CL:0000048!4.04e-11!430;CL:0000723!2.77e-10!436;CL:0000548!2.94e-10!679;CL:0000004!2.94e-10!679;CL:0000255!2.94e-10!679;CL:0000012!9.23e-10!682;CL:0002320!1.47e-09!365;CL:0000134!6.97e-09!358;CL:0000738!9.17e-09!140;CL:0000034!1.41e-08!444;CL:0000219!9.15e-08!390;CL:0002031!2.73e-07!124;CL:0000063!6.59e-07!578 | |ontology_enrichment_celltype=CL:0000766!9.58e-31!76;CL:0000839!8.49e-29!70;CL:0000557!1.16e-28!71;CL:0002194!1.05e-27!63;CL:0000576!1.05e-27!63;CL:0000040!1.05e-27!63;CL:0000559!1.05e-27!63;CL:0002009!7.44e-27!65;CL:0002057!1.76e-23!42;CL:0000860!3.23e-21!45;CL:0000763!2.33e-19!112;CL:0000049!2.33e-19!112;CL:0002371!1.00e-18!591;CL:0000144!3.37e-13!625;CL:0000048!4.04e-11!430;CL:0000723!2.77e-10!436;CL:0000548!2.94e-10!679;CL:0000004!2.94e-10!679;CL:0000255!2.94e-10!679;CL:0000012!9.23e-10!682;CL:0002320!1.47e-09!365;CL:0000134!6.97e-09!358;CL:0000738!9.17e-09!140;CL:0000034!1.41e-08!444;CL:0000219!9.15e-08!390;CL:0002031!2.73e-07!124;CL:0000063!6.59e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000473;8.24e-19;39!CL:0000234;8.24e-19;39!CL:0000860;1.18e-18;33!CL:0002057;1.18e-18;33!CL:0000576;6.49e-17;48!CL:0000766;7.71e-15;69!CL:0000763;6.85e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.30e-33,72;CL:0000839,3.54e-31,66;CL:0000557,4.21e-31,67;CL:0002194,3.15e-30,59;CL:0000576,3.15e-30,59;CL:0000040,3.15e-30,59;CL:0000559,3.15e-30,59;CL:0002009,3.05e-29,61;CL:0000473,2.70e-27,48;CL:0000234,2.70e-27,48;CL:0000860,1.37e-23,42;CL:0002057,1.37e-23,42;CL:0000763,1.76e-20,108;CL:0000049,1.76e-20,108;CL:0000048,2.65e-11,427;CL:0000723,1.71e-10,433;CL:0002320,1.00e-09,361;CL:0000738,2.58e-09,136;CL:0000134,4.84e-09,354;CL:0000034,9.63e-09,441;CL:0000219,5.58e-08,386;CL:0002031,7.94e-08,120;CL:0002087,3.72e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.53e-17;42!CL:0000049;5.92e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.66e-30!216;UBERON:0002193!1.18e-29!112;UBERON:0002390!1.10e-28!102;UBERON:0003061!1.10e-28!102;UBERON:0002371!1.68e-27!80;UBERON:0004765!4.45e-24!101;UBERON:0001434!4.45e-24!101;UBERON:0001474!6.11e-24!86;UBERON:0002204!4.83e-23!167;UBERON:0002405!5.49e-18!115;UBERON:0000926!5.82e-16!448;UBERON:0004120!5.82e-16!448;UBERON:0006603!5.82e-16!448;UBERON:0000480!1.01e-12!626;UBERON:0000467!2.24e-12!625;UBERON:0000468!8.26e-10!659;UBERON:0004535!1.16e-09!110;UBERON:0001009!2.63e-09!113;UBERON:0002384!1.06e-08!375;UBERON:0000055!1.03e-07!69;UBERON:0000479!1.29e-07!787;UBERON:0002050!1.51e-07!605;UBERON:0005423!1.51e-07!605;UBERON:0000923!1.51e-07!604;UBERON:0005291!1.51e-07!604;UBERON:0006598!1.51e-07!604;UBERON:0002532!1.51e-07!604;UBERON:0002049!4.03e-07!79;UBERON:0007798!4.03e-07!79 | |ontology_enrichment_uberon=UBERON:0003081!2.66e-30!216;UBERON:0002193!1.18e-29!112;UBERON:0002390!1.10e-28!102;UBERON:0003061!1.10e-28!102;UBERON:0002371!1.68e-27!80;UBERON:0004765!4.45e-24!101;UBERON:0001434!4.45e-24!101;UBERON:0001474!6.11e-24!86;UBERON:0002204!4.83e-23!167;UBERON:0002405!5.49e-18!115;UBERON:0000926!5.82e-16!448;UBERON:0004120!5.82e-16!448;UBERON:0006603!5.82e-16!448;UBERON:0000480!1.01e-12!626;UBERON:0000467!2.24e-12!625;UBERON:0000468!8.26e-10!659;UBERON:0004535!1.16e-09!110;UBERON:0001009!2.63e-09!113;UBERON:0002384!1.06e-08!375;UBERON:0000055!1.03e-07!69;UBERON:0000479!1.29e-07!787;UBERON:0002050!1.51e-07!605;UBERON:0005423!1.51e-07!605;UBERON:0000923!1.51e-07!604;UBERON:0005291!1.51e-07!604;UBERON:0006598!1.51e-07!604;UBERON:0002532!1.51e-07!604;UBERON:0002049!4.03e-07!79;UBERON:0007798!4.03e-07!79 | ||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p3@NUMA1 | |short_description=p3@NUMA1 | ||
}} | }} |
Latest revision as of 00:24, 20 September 2015
Short description: | p3@NUMA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NUMA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000534987, ENST00000535087, ENST00000535838, uc001orp.2_5end |
EntrezGene: | NUMA1 |
HGNC: | 8059 |
UniProt: | F5H1L0F5H4Y4Q86XH4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.30e-33 | 72 |
myeloid lineage restricted progenitor cell | 3.54e-31 | 66 |
granulocyte monocyte progenitor cell | 4.21e-31 | 67 |
monopoietic cell | 3.15e-30 | 59 |
monocyte | 3.15e-30 | 59 |
monoblast | 3.15e-30 | 59 |
promonocyte | 3.15e-30 | 59 |
macrophage dendritic cell progenitor | 3.05e-29 | 61 |
defensive cell | 2.70e-27 | 48 |
phagocyte | 2.70e-27 | 48 |
classical monocyte | 1.37e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.37e-23 | 42 |
myeloid cell | 1.76e-20 | 108 |
common myeloid progenitor | 1.76e-20 | 108 |
multi fate stem cell | 2.65e-11 | 427 |
somatic stem cell | 1.71e-10 | 433 |
connective tissue cell | 1.00e-09 | 361 |
leukocyte | 2.58e-09 | 136 |
mesenchymal cell | 4.84e-09 | 354 |
stem cell | 9.63e-09 | 441 |
motile cell | 5.58e-08 | 386 |
hematopoietic lineage restricted progenitor cell | 7.94e-08 | 120 |
nongranular leukocyte | 3.72e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 6.82e-33 | 203 |
hemolymphoid system | 2.59e-31 | 108 |
hematopoietic system | 2.00e-30 | 98 |
blood island | 2.00e-30 | 98 |
bone marrow | 1.80e-29 | 76 |
skeletal element | 3.93e-26 | 90 |
immune system | 4.62e-26 | 93 |
skeletal system | 4.63e-26 | 100 |
bone element | 9.72e-26 | 82 |
mesoderm | 9.19e-25 | 315 |
mesoderm-derived structure | 9.19e-25 | 315 |
presumptive mesoderm | 9.19e-25 | 315 |
musculoskeletal system | 3.18e-24 | 167 |
cardiovascular system | 1.03e-09 | 109 |
circulatory system | 2.37e-09 | 112 |
embryonic structure | 4.50e-09 | 564 |
germ layer | 6.22e-09 | 560 |
germ layer / neural crest | 6.22e-09 | 560 |
embryonic tissue | 6.22e-09 | 560 |
presumptive structure | 6.22e-09 | 560 |
germ layer / neural crest derived structure | 6.22e-09 | 560 |
epiblast (generic) | 6.22e-09 | 560 |
connective tissue | 6.96e-09 | 371 |
developing anatomical structure | 7.06e-08 | 581 |
vessel | 9.10e-08 | 68 |
tissue | 1.08e-07 | 773 |
vasculature | 3.68e-07 | 78 |
vascular system | 3.68e-07 | 78 |