FFCP PHASE1:Hg19::chr22:21265414..21265452,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:21265414..21265452,+ | |||
|coexpression_cluster_id=C1360 | |coexpression_cluster_id=C1360 | ||
|description=CAGE_peak_at_chr22:21265414..21265452,+ | |description=CAGE_peak_at_chr22:21265414..21265452,+ | ||
|id=chr22:21265414..21265452,+ | |id=chr22:21265414..21265452,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.69e-15!76;CL:0000557!1.22e-14!71;CL:0002057!6.76e-14!42;CL:0000839!1.42e-13!70;CL:0002009!3.86e-13!65;CL:0000860!1.07e-12!45;CL:0000763!1.44e-12!112;CL:0000049!1.44e-12!112;CL:0002194!3.54e-12!63;CL:0000576!3.54e-12!63;CL:0000040!3.54e-12!63;CL:0000559!3.54e-12!63 | |ontology_enrichment_celltype=CL:0000766!1.69e-15!76;CL:0000557!1.22e-14!71;CL:0002057!6.76e-14!42;CL:0000839!1.42e-13!70;CL:0002009!3.86e-13!65;CL:0000860!1.07e-12!45;CL:0000763!1.44e-12!112;CL:0000049!1.44e-12!112;CL:0002194!3.54e-12!63;CL:0000576!3.54e-12!63;CL:0000040!3.54e-12!63;CL:0000559!3.54e-12!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.19e-14;33!CL:0002057;2.19e-14;33!CL:0000473;2.88e-13;39!CL:0000234;2.88e-13;39!CL:0000576;8.28e-08;48!CL:0000766;1.27e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.23e-16,72;CL:0000557,1.58e-15,67;CL:0000473,1.63e-15,48;CL:0000234,1.63e-15,48;CL:0000839,2.10e-14,66;CL:0000860,4.92e-14,42;CL:0002057,4.92e-14,42;CL:0002009,5.31e-14,61;CL:0002194,5.37e-13,59;CL:0000576,5.37e-13,59;CL:0000040,5.37e-13,59;CL:0000559,5.37e-13,59;CL:0000763,5.42e-13,108;CL:0000049,5.42e-13,108 | |||
|ontology_enrichment_development_v019=CL:0002057;9.38e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.24e-13!80;UBERON:0001474!6.30e-13!86;UBERON:0002204!4.11e-10!167;UBERON:0004765!4.22e-10!101;UBERON:0001434!4.22e-10!101;UBERON:0002405!7.67e-10!115;UBERON:0002390!4.11e-09!102;UBERON:0003061!4.11e-09!102;UBERON:0002193!1.46e-08!112;UBERON:0003081!5.71e-08!216 | |ontology_enrichment_uberon=UBERON:0002371!1.24e-13!80;UBERON:0001474!6.30e-13!86;UBERON:0002204!4.11e-10!167;UBERON:0004765!4.22e-10!101;UBERON:0001434!4.22e-10!101;UBERON:0002405!7.67e-10!115;UBERON:0002390!4.11e-09!102;UBERON:0003061!4.11e-09!102;UBERON:0002193!1.46e-08!112;UBERON:0003081!5.71e-08!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.54e-14,76;UBERON:0001474,1.56e-13,82;UBERON:0002405,7.78e-11,93;UBERON:0004765,3.59e-10,90;UBERON:0003081,1.28e-09,203;UBERON:0002204,1.92e-09,167;UBERON:0002390,2.15e-09,98;UBERON:0003061,2.15e-09,98;UBERON:0001434,4.34e-09,100;UBERON:0002193,9.79e-09,108 | |||
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| ||
|short_description=p@chr22:21265414..21265452,+ | |short_description=p@chr22:21265414..21265452,+ | ||
}} | }} |
Latest revision as of 19:17, 28 July 2015
Short description: | p@chr22:21265414..21265452, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:21265414..21265452, + |
Coexpression cluster: | C1360_skeletal_Monocytederived_Smooth_optic_Myoblast_acute_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.23e-16 | 72 |
granulocyte monocyte progenitor cell | 1.58e-15 | 67 |
defensive cell | 1.63e-15 | 48 |
phagocyte | 1.63e-15 | 48 |
myeloid lineage restricted progenitor cell | 2.10e-14 | 66 |
classical monocyte | 4.92e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.92e-14 | 42 |
macrophage dendritic cell progenitor | 5.31e-14 | 61 |
monopoietic cell | 5.37e-13 | 59 |
monocyte | 5.37e-13 | 59 |
monoblast | 5.37e-13 | 59 |
promonocyte | 5.37e-13 | 59 |
myeloid cell | 5.42e-13 | 108 |
common myeloid progenitor | 5.42e-13 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.54e-14 | 76 |
bone element | 1.56e-13 | 82 |
immune system | 7.78e-11 | 93 |
skeletal element | 3.59e-10 | 90 |
lateral plate mesoderm | 1.28e-09 | 203 |
musculoskeletal system | 1.92e-09 | 167 |
hematopoietic system | 2.15e-09 | 98 |
blood island | 2.15e-09 | 98 |
skeletal system | 4.34e-09 | 100 |
hemolymphoid system | 9.79e-09 | 108 |