FFCP PHASE1:Hg19::chr17:40120071..40120085,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1267 | |EntrezGene=1267 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2158 | |HGNC=2158 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_CU674668,CU675383,D28445,DQ892575,DQ895791_5end | |association_with_transcript=0bp_to_CU674668,CU675383,D28445,DQ892575,DQ895791_5end | ||
|cluster_id=chr17:40120071..40120085,+ | |||
|coexpression_cluster_id=C729 | |coexpression_cluster_id=C729 | ||
|description=CAGE_peak_15_at_CNP_5end | |description=CAGE_peak_15_at_CNP_5end | ||
|id=chr17:40120071..40120085,+ | |id=chr17:40120071..40120085,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;1.23e-66;1!UBERON:0006238;2.55e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.34e-20!82;UBERON:0001049!6.60e-20!57;UBERON:0005068!6.60e-20!57;UBERON:0006241!6.60e-20!57;UBERON:0007135!6.60e-20!57;UBERON:0005743!1.38e-18!86;UBERON:0000955!8.53e-18!69;UBERON:0006238!8.53e-18!69;UBERON:0000073!9.30e-18!94;UBERON:0001016!9.30e-18!94;UBERON:0001893!8.12e-17!34;UBERON:0002020!2.86e-16!34;UBERON:0003528!2.86e-16!34;UBERON:0002780!4.52e-16!41;UBERON:0001890!4.52e-16!41;UBERON:0006240!4.52e-16!41;UBERON:0002616!5.67e-16!59;UBERON:0002791!1.25e-15!33;UBERON:0003080!1.62e-15!42;UBERON:0001869!2.20e-14!32;UBERON:0003075!1.18e-11!86;UBERON:0007284!1.18e-11!86;UBERON:0000025!1.31e-11!194;UBERON:0002346!1.03e-10!90;UBERON:0001950!1.70e-10!20;UBERON:0002308!4.70e-10!9;UBERON:0000125!4.70e-10!9;UBERON:0004111!6.11e-10!241;UBERON:0000477!1.37e-09!286;UBERON:0003056!1.53e-09!61;UBERON:0002619!2.90e-09!22;UBERON:0007023!4.50e-09!115;UBERON:0000956!5.75e-09!25;UBERON:0000203!5.75e-09!25;UBERON:0005174!4.84e-08!5;UBERON:0001137!4.84e-08!5;UBERON:0009663!6.74e-08!7;UBERON:0002420!1.01e-07!9;UBERON:0007245!1.01e-07!9;UBERON:0010009!1.01e-07!9;UBERON:0010011!1.01e-07!9;UBERON:0000454!1.01e-07!9;UBERON:0000033!1.28e-07!123;UBERON:0004121!1.95e-07!169;UBERON:0000924!5.24e-07!173;UBERON:0006601!5.24e-07!173;UBERON:0000153!7.72e-07!129;UBERON:0007811!7.72e-07!129 | |ontology_enrichment_uberon=UBERON:0001017!4.34e-20!82;UBERON:0001049!6.60e-20!57;UBERON:0005068!6.60e-20!57;UBERON:0006241!6.60e-20!57;UBERON:0007135!6.60e-20!57;UBERON:0005743!1.38e-18!86;UBERON:0000955!8.53e-18!69;UBERON:0006238!8.53e-18!69;UBERON:0000073!9.30e-18!94;UBERON:0001016!9.30e-18!94;UBERON:0001893!8.12e-17!34;UBERON:0002020!2.86e-16!34;UBERON:0003528!2.86e-16!34;UBERON:0002780!4.52e-16!41;UBERON:0001890!4.52e-16!41;UBERON:0006240!4.52e-16!41;UBERON:0002616!5.67e-16!59;UBERON:0002791!1.25e-15!33;UBERON:0003080!1.62e-15!42;UBERON:0001869!2.20e-14!32;UBERON:0003075!1.18e-11!86;UBERON:0007284!1.18e-11!86;UBERON:0000025!1.31e-11!194;UBERON:0002346!1.03e-10!90;UBERON:0001950!1.70e-10!20;UBERON:0002308!4.70e-10!9;UBERON:0000125!4.70e-10!9;UBERON:0004111!6.11e-10!241;UBERON:0000477!1.37e-09!286;UBERON:0003056!1.53e-09!61;UBERON:0002619!2.90e-09!22;UBERON:0007023!4.50e-09!115;UBERON:0000956!5.75e-09!25;UBERON:0000203!5.75e-09!25;UBERON:0005174!4.84e-08!5;UBERON:0001137!4.84e-08!5;UBERON:0009663!6.74e-08!7;UBERON:0002420!1.01e-07!9;UBERON:0007245!1.01e-07!9;UBERON:0010009!1.01e-07!9;UBERON:0010011!1.01e-07!9;UBERON:0000454!1.01e-07!9;UBERON:0000033!1.28e-07!123;UBERON:0004121!1.95e-07!169;UBERON:0000924!5.24e-07!173;UBERON:0006601!5.24e-07!173;UBERON:0000153!7.72e-07!129;UBERON:0007811!7.72e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0002336;3.34e-66;1!UBERON:0011215;3.34e-66;1!UBERON:0001018;3.34e-66;1!UBERON:0002473;3.34e-66;1!UBERON:0005340;3.34e-66;1!UBERON:0003544;3.34e-66;1!UBERON:0005970;3.34e-66;1!UBERON:0002316;3.34e-66;1!UBERON:0001020;3.34e-66;1!UBERON:0002437;3.34e-66;1!UBERON:0005162;5.96e-34;2!UBERON:0000122;5.96e-34;2!UBERON:0001894;8.16e-11;7!UBERON:0000955;1.64e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,4.66e-66,1;UBERON:0011215,4.66e-66,1;UBERON:0001018,4.66e-66,1;UBERON:0002473,4.66e-66,1;UBERON:0005340,4.66e-66,1;UBERON:0003544,4.66e-66,1;UBERON:0005970,4.66e-66,1;UBERON:0002316,4.66e-66,1;UBERON:0001020,4.66e-66,1;UBERON:0002437,4.66e-66,1;UBERON:0005162,7.05e-34,2;UBERON:0000122,7.05e-34,2;UBERON:0001894,8.16e-11,7;UBERON:0006222,8.16e-11,7;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0001016,1.68e-07,89;UBERON:0002780,2.10e-07,41;UBERON:0001890,2.10e-07,41;UBERON:0003080,2.10e-07,41;UBERON:0006240,2.10e-07,41 | |||
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| ||
|short_description=p15@CNP | |short_description=p15@CNP | ||
}} | }} |
Latest revision as of 07:56, 20 September 2015
Short description: | p15@CNP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_CNP_5end |
Coexpression cluster: | C729_diencephalon_corpus_thalamus_occipital_brain_medulla_frontal |
Association with transcript: | 0bp_to_CU674668, CU675383, D28445, DQ892575, DQ895791_5end |
EntrezGene: | CNP |
HGNC: | 2158 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corpus callosum | 4.66e-66 | 1 |
central nervous system cell part cluster | 4.66e-66 | 1 |
axon tract | 4.66e-66 | 1 |
intercerebral commissure | 4.66e-66 | 1 |
dorsal telencephalic commissure | 4.66e-66 | 1 |
brain white matter | 4.66e-66 | 1 |
brain commissure | 4.66e-66 | 1 |
white matter | 4.66e-66 | 1 |
nervous system commissure | 4.66e-66 | 1 |
cerebral hemisphere white matter | 4.66e-66 | 1 |
multi cell component structure | 7.05e-34 | 2 |
neuron projection bundle | 7.05e-34 | 2 |
diencephalon | 8.16e-11 | 7 |
future diencephalon | 8.16e-11 | 7 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
nervous system | 1.68e-07 | 89 |
regional part of forebrain | 2.10e-07 | 41 |
forebrain | 2.10e-07 | 41 |
anterior neural tube | 2.10e-07 | 41 |
future forebrain | 2.10e-07 | 41 |