FFCP PHASE1:Hg19::chr9:109984515..109984523,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:109984515..109984523,+ | |||
|coexpression_cluster_id=C126 | |coexpression_cluster_id=C126 | ||
|description=CAGE_peak_at_chr9:109984515..109984523,+ | |description=CAGE_peak_at_chr9:109984515..109984523,+ | ||
|id=chr9:109984515..109984523,+ | |id=chr9:109984515..109984523,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002561;2.59e-10;2!CL:0000322;1.61e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,1.53e-10,2;CL:0000322,2.06e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.44e-08!143;DOID:305!4.61e-08!106 | |ontology_enrichment_disease=DOID:0050687!1.44e-08!143;DOID:305!4.61e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:3910;7.16e-11;2!DOID:3908;2.73e-09;5!DOID:3905;5.79e-09;9!DOID:1325;5.29e-07;7!DOID:3904;5.29e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.04e-10,2;DOID:3908,4.69e-09,5;DOID:3905,8.60e-09,9;DOID:0050687,4.91e-08,143;DOID:305,4.57e-07,106;DOID:1325,6.17e-07,7;DOID:3904,6.17e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0000475!3.66e-08!365;UBERON:0000481!8.25e-08!347;UBERON:0002108!3.48e-07!14 | |ontology_enrichment_uberon=UBERON:0000475!3.66e-08!365;UBERON:0000481!8.25e-08!347;UBERON:0002108!3.48e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;2.85e-11;2!UBERON:0004903;7.16e-11;2!UBERON:0002173;7.16e-11;2!UBERON:0002186;7.16e-11;2!UBERON:0005933;2.59e-10;2!UBERON:0005942;2.59e-10;2!UBERON:0005932;2.59e-10;2!UBERON:0004821;1.61e-07;3!UBERON:0007499;1.61e-07;3!UBERON:0003215;1.61e-07;3!UBERON:0010368;1.61e-07;3!UBERON:0009911;1.61e-07;3!UBERON:0002299;1.61e-07;3!UBERON:0006524;1.61e-07;3!UBERON:0008874;1.61e-07;3!UBERON:0002169;1.61e-07;3!UBERON:0004894;1.61e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.72e-11,2;UBERON:0004903,1.04e-10,2;UBERON:0002173,1.04e-10,2;UBERON:0002186,1.04e-10,2;UBERON:0005933,1.53e-10,2;UBERON:0005942,1.53e-10,2;UBERON:0005932,1.53e-10,2;UBERON:0004821,2.06e-07,3;UBERON:0003215,2.06e-07,3;UBERON:0010368,2.06e-07,3;UBERON:0009911,2.06e-07,3;UBERON:0002299,2.06e-07,3;UBERON:0006524,2.06e-07,3;UBERON:0008874,2.06e-07,3;UBERON:0002169,2.06e-07,3;UBERON:0004894,2.06e-07,3 | |||
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| ||
|short_description=p@chr9:109984515..109984523,+ | |short_description=p@chr9:109984515..109984523,+ | ||
}} | }} |
Latest revision as of 21:29, 31 July 2015
Short description: | p@chr9:109984515..109984523, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:109984515..109984523, + |
Coexpression cluster: | C126_gastrointestinal_argyrophil_smallcell_merkel_bile_insula_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 1.53e-10 | 2 |
pneumocyte | 2.06e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 2.72e-11 | 2 |
bronchoalveolar duct junction | 1.04e-10 | 2 |
alveolar duct | 1.04e-10 | 2 |
bronchiole | 1.04e-10 | 2 |
hair root sheath | 1.53e-10 | 2 |
hair outer root sheath | 1.53e-10 | 2 |
bulb of hair follicle | 1.53e-10 | 2 |
pulmonary alveolus epithelium | 2.06e-07 | 3 |
alveolus | 2.06e-07 | 3 |
pulmonary lobule | 2.06e-07 | 3 |
lobule | 2.06e-07 | 3 |
alveolus of lung | 2.06e-07 | 3 |
alveolar system | 2.06e-07 | 3 |
pulmonary acinus | 2.06e-07 | 3 |
alveolar sac | 2.06e-07 | 3 |
alveolar wall | 2.06e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.04e-10 | 2 |
non-small cell lung carcinoma | 4.69e-09 | 5 |
lung carcinoma | 8.60e-09 | 9 |
cell type cancer | 4.91e-08 | 143 |
carcinoma | 4.57e-07 | 106 |
bronchus cancer | 6.17e-07 | 7 |
bronchogenic carcinoma | 6.17e-07 | 7 |